Paramisgurnus dabryanus (large-scale loach): 135735642
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Entry
135735642 CDS
T10799
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135735642 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135735642 (runx1)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
135735642 (runx1)
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
135735642
NCBI-ProteinID:
XP_065110176
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All DBs
Position
4:29096003..29145607
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AA seq
520 aa
AA seq
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MHRAQGQNRPANITGPTQGDHGFQGVGQSREPFKIREQIKLEVLDSAEEEGSALEKQSIV
MASNSIFESFSSYQSCFAREPAPGRRFTPPSTTLSSGKMNEGLPLGAQESSGAALVGKLR
MADRNMVEVLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTV
MAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRA
IKITVDGPREPRRHRQKPDEGVKPSALAFSEQLRRSAMRCSPHHGPAPNPRPALNTPPFS
SPAHSQISDTRQMQTSPSWSYEQSYPYLGSISTPTVHPTTPISPSRNAIHCPDLTAFTDP
RVSLERSFPSLPSLPDGRFSDPRVPYPTGAFTYTPTPVTNAIGIGMSAMTTPAGRYHTYL
PPTYPAGSSQGQGGPFQTSSSPYHLYYSSAAGSYQFSMMPGGGGGERSPPRILPPCTNAS
TGSALLHPSLPNQSDVVVEAEGSHSSSPTSMSVEAVWRPY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcacagagcccaaggacagaaccgccctgccaacatcactggaccgacacagggtgac
catgggttccagggtgtggggcaaagcagggagcctttcaaaattagggagcaaatcaag
ttggaggtgttggattcagccgaagaggagggctcggcgttggagaagcagtcgatcgtg
atggcctcaaacagcatctttgaaagcttctcatcctaccagtcttgcttcgccagagaa
cctgcgcctgggcgacgctttacgcctccctcgaccacccttagctcagggaagatgaat
gagggtttacccctgggggctcaggagagcagcggcgccgccctggtgggcaaactacgc
atggctgaccggaatatggtggaggtgctttccgaccacccgggtgaactggtgcgtacg
gacagcccaaacttcctgtgctcggtactgcccacacactggcgctgtaataagaccctg
cccatagccttcaaggtggtggctctcggtgatatcccagatggaacgttagtgacggtg
atggcggggaacgatgagaattactctgccgagcttcgcaacgccacggccgccatcaaa
aatcaagtcgcccgattcaacgacctgcgattcgtgggccgcagtggacgagggaagagt
tttactctcaccatcaccgtgttcaccaaccctccgcaggtggccacctatcagagagcc
atcaagatcacagtggacggaccgcgagagccacgccggcatcgacagaagccggatgaa
ggtgtaaagccaagcgcgttagctttctctgagcagctgaggcgaagtgccatgcgctgt
agtccacaccatggccccgcccccaacccacgccccgccctcaacacgcccccattcagc
agccccgcccacagccagatttctgatactcgacagatgcaaacttctccatcgtggtcg
tatgaacagtcgtatccttacctgggttccatctccaccccaacggttcatcccacaaca
ccaatatcacccagccgaaacgccatacactgtccagatctgacagcgtttaccgaccca
cgtgtcagtctggagcgttccttcccctcgctcccctccctaccagacgggcgtttctct
gaccctcgagtgccctaccccaccggagcgttcacttacacgccgacccccgtcaccaac
gcaatcggcatcgggatgtcggctatgacgacccctgccggccgctaccacacgtattta
ccgccgacctaccccgccggctcttctcagggtcagggcggacccttccaaaccagctcg
tcgccctatcacctgtactacagcagcgccgccggatcgtaccagttctcaatgatgccg
gggggaggcggaggcgagcgctcgccaccccgcatcctaccgccctgcaccaatgcctcc
acaggctccgccctcctgcacccctctctgcccaatcagagcgatgtcgtggtggaggcc
gaaggaagtcacagcagttcgccaaccagcatgtccgtcgaagccgtttggaggccgtat
tga
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