Paramisgurnus dabryanus (large-scale loach): 135735665
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Entry
135735665 CDS
T10799
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pdab00535
]
135735665 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pdab00537
]
135735665 (gpc6a)
Proteoglycans [BR:
pdab00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
135735665 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pdab00537
]
Others
135735665 (gpc6a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
MRP-S23
Motif
Other DBs
NCBI-GeneID:
135735665
NCBI-ProteinID:
XP_065110214
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Position
4:complement(28003543..28229989)
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AA seq
560 aa
AA seq
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MLRTPVVIFTSLSLVVSLSFAGDVKSRSCGDVRHAYMSKGFSLHNVPHQEIPGEHLRVCS
QGYTCCTSEMEEKLGHQSKLDFEKLVEDSSHTIRTIFTSKHKKFDEFFLELLDNSEKSLN
DMFVRTYGILYTHNSEMFEELFSELKRYYTGGNVNLEEMLNDFWMRLLERMFQLLNSEYT
LTEDFLECISKYTDQLKPFGDVPRKLKAQVTKAFIVARSFVQGLMVGREVANRVAKVNIS
PGCSKALTKMLYCPYCGGMPDLKPCASYCQNVMRGCLANQADLDPEWNLFIDAMLLVADR
LEGPFNIEAVMEPIDVKISEAIMIMQDNSMQVSAKVFSGCGKPKPVEMGRSARGISDVFN
SRFKPYSPDERPTTAAGTSLDRLRNVWTTMQHSVIDIKEELKQSKKFWSSLPDVICAEDK
VTDPNEEQCWNSHTKGRYFPEVVKDGLTNQLNNPEVDVDITRPDTFIRQQIMTLRVMTNK
LRNAYNGKDVYFQDSSDEESGSGSGSGFTTVPEVVKTEPPMVEADISEPQPAADASGQQK
PRLQLLVGVIALVSLLLQWR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggacacctgtcgtgattttcacttctctgtcgctcgtcgtatcgctgtcgttt
gctggagatgtaaaatcgcgcagctgcggcgacgtgcgccatgcgtacatgtccaaaggc
ttcagtctccataatgtgccacatcaggagataccaggtgaacatctgcgggtttgctct
caagggtacacctgctgtacctccgagatggaagagaaactcgggcaccagagcaagctg
gattttgagaaattagtcgaagacagcagccacaccatacggacaatatttacctccaaa
cacaagaagtttgacgaattcttcctggagttgctggacaactcggaaaagtcgctcaac
gacatgttcgtgcgcacatacggcatactctacactcacaactcggagatgttcgaggag
ctgttctccgagctcaagcgctattacaccggcggaaacgtcaatctggaggagatgctg
aacgacttctggatgaggttgttggagcgaatgtttcagctgcttaactcggagtacacg
ctcacagaggactttctggagtgcatcagcaaatacacagaccagctaaagcccttcgga
gacgtcccgcgcaagctcaaggctcaggtcacgaaggccttcatcgtggctcgatcgttc
gttcaaggactcatggtgggtcgagaagtggccaacagggtggcaaaggtcaatatatca
ccggggtgcagcaaagcgctgaccaaaatgctgtattgcccatactgtggaggaatgcca
gatcttaaaccctgcgccagctactgccaaaatgtcatgcgaggctgtctggcaaaccaa
gcggacctcgatccagagtggaacctcttcatcgatgccatgctgctagtagctgatagg
ctggagggaccgtttaacatcgaggctgtcatggaaccgattgatgtgaagatctcagaa
gcaatcatgatcatgcaagacaacagtatgcaggtttcagctaaggtattcagtggatgc
ggtaagcccaaaccggtcgaaatgggaaggtctgcccgcgggatctcggatgtgttcaac
agtcgtttcaaaccgtacagcccagatgaaaggccgaccacagcagcagggaccagtttg
gacagactgaggaatgtttggacgactatgcaacacagtgtgatcgacattaaggaggag
ctcaaacagtcgaagaagttctggtcgtcgctgccagacgtcatctgtgcggaggataaa
gtgactgacccaaatgaagagcagtgctggaacagccacacaaagggaagatattttcct
gaagttgtgaaagacggtcttacaaaccagctcaataatccagaggtggacgtggacatc
acaagaccggacacgttcatccgtcagcagatcatgaccctcagagtaatgaccaacaag
ttacgaaacgcttacaacgggaaagatgtctactttcaagattcaagtgatgaggagagc
ggttcgggcagcggtagcggcttcacgacagtacccgaggtggtgaagacggagcctccg
atggtggaagccgacatcagcgaaccgcagcctgcggcggatgcgtctggtcagcaaaag
cctcgtctgcagttattagtcggtgtaatcgcgctcgtatccctgttactgcagtggaga
taa
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