Paramisgurnus dabryanus (large-scale loach): 135735961
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Entry
135735961 CDS
T10799
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135735961 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135735961 (zcchc7)
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135735961 (zcchc7)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
135735961 (zcchc7)
Transfer RNA biogenesis [BR:
pdab03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
135735961 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
135735961
NCBI-ProteinID:
XP_065110744
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All DBs
Position
4:42190894..42259093
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AA seq
595 aa
AA seq
DB search
MFSGYHERVDLEDELYQDEEDSSLSDAESELQFRLYSQLHYSTENQDSHENLTEVQSSIP
QQKSVPPPPPAAPVDVIVIDSGPDAITVSDNTEEDDSVCAKKGQTSNHCSLARKRCEPYS
AHSLNPSRGQTGRNSPDDIVVLDSESDESSDSHSEPPFVEDLGSDSDSDELENWMILGRD
KHEEDQSIQLNLSISENYEKQEHVNDGVKVANWIVSERDKRAQIYNKGVGPRRLSNRYYN
ENSVTCHNCNKVGHLSKNCPTPKKLPCCSLCGVRGHWARTCPKRHCSNCSLPGHTYDDCL
ERAYWHKRCHRCGMTGHFNDDCPEVWRQYHLTTTPGPIRQSGNPEACKTPAYCYNCSKKG
HFGFECSDRRMYRGTYPTLPFVSYYDNAQDINCREHRLKKKARELQDAGLIYLPDGGAVS
STPQPPQKKQKTYHQQSPYSTPAQTNNSHTPKRRIAHTPKHQPQQFTHMNFNQDPQTPGK
GGQNTPHSAFTPHKLSKKKAKKKKRSSSVIVLDEDADFPRGCRNSPYAKGEVTSPWAANK
NQGMPFGMRKNNNKNPESQTKKKERMWRKRQKKAAKDAATHLPDDLFRIKQRRSR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagggtaccatgagcgtgtggaccttgaggatgagctgtaccaggatgaagaa
gactcgagtttgtcggatgccgaaagcgagttgcagttccgactttattcccagctgcac
tatagcactgagaaccaggattcccatgagaacttgacagaggtccagtcatcaatacct
cagcagaaatctgtgcctccccctcctcctgctgcacctgtagatgtcatagtgatagac
tctggtccagatgctatcacggtatcagataacacagaggaagatgacagcgtgtgtgca
aagaaaggccaaacatcaaaccactgtagcctggcacgcaagaggtgcgagccctatagc
gcccattcgctcaatccatcacgtggtcaaacaggaagaaactctccggatgatattgtg
gtgttggattcagagtcagatgagagctcggattcccattcggaacccccttttgtggag
gatctgggttcggattccgattcggatgaactggagaactggatgattctgggtcgggac
aaacatgaggaagatcagagcatccagctgaacctttccatatcggagaactatgagaaa
caagaacatgtaaatgatggagtgaaggttgcaaactggattgtttcagaaagggataaa
cgggctcagatctataataaaggggttggcccgaggcgtctgtcaaaccgttactacaat
gaaaattctgtcacgtgtcacaactgcaacaaggttggccacctctccaaaaactgcccc
acaccaaagaagttgccgtgctgctcattatgtggagttcggggacactgggcgcggacc
tgtccgaagcgtcactgttcaaactgctcgctgcccggccacacctacgatgactgtctg
gagagagcttactggcacaagcgctgccatcgctgtggaatgactggccacttcaacgat
gactgcccagaagtctggaggcagtaccatctcacgaccacaccaggacccatccgtcag
tccggtaatccagaggcctgcaaaacacctgcctattgttacaactgctctaagaaagga
cattttggctttgaatgctctgataggagaatgtatagagggacatatcccaccctgccc
tttgtttcctattatgacaatgcacaagacatcaattgccgggaacaccgacttaaaaag
aaagccagagaactgcaggatgctggattgatttatttgccagatggtggtgctgtttca
tccacccctcagccaccacagaaaaaacagaaaacctaccaccaacagtccccgtacagt
acccctgctcagacaaacaactcgcacacaccgaagagacgcatcgcgcacacgccgaaa
catcaaccgcaacagttcacccacatgaatttcaatcaggacccacaaacaccggggaaa
ggaggacaaaacaccccgcacagtgcattcacaccccataaactcagcaagaagaaagcc
aagaaaaagaaaaggagttcttcggttatagttctagacgaagacgcggactttccgaga
ggttgcagaaacagcccttacgctaaaggagaggtcacatcaccttgggcagccaataaa
aaccaaggtatgccctttggaatgagaaagaacaataacaagaatccagagagccaaacg
aaaaagaaggaaaggatgtggagaaaaaggcagaaaaaagctgcgaaagatgccgccacg
catctgcccgacgacctttttcggatcaaacaaaggcgaagcagataa
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