Paramisgurnus dabryanus (large-scale loach): 135735986
Help
Entry
135735986 CDS
T10799
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135735986 (lrba)
Membrane trafficking [BR:
pdab04131
]
Endosome - Lysosome transport
Others
Others
135735986 (lrba)
Endosome - Golgi transport
135735986 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
135735986 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
SUKH_6
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
135735986
NCBI-ProteinID:
XP_065110775
LinkDB
All DBs
Position
4:43290002..43626520
Genome browser
AA seq
2820 aa
AA seq
DB search
MASAGDSAVGIPIRGIRMKFAVLAGLLEAGEVSNRDTVETIFNLLVGGQFDLEMNFIIQE
TESIICMVELLDKCDSTCQAEVWSMFTAVLKKSLRNLQACTDVGLIQLVLQRIDKADNMI
ADLLVDMLGVLASYSITVKELKLFFSQLKGEQGQWPPHAVKLLSVLKSMAQRNGPDSFFS
FPGKSAAAIALPPIAKWPHQNGFTFHTWLRLDPLNNINVDKDKPYLYCFRTNKGLGYSAH
FVGSCLIVTSLKSKSKGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEISCYVNGELASYG
EITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFSEALSAAQILAIYQLGPGYKG
TFKHKAESDLMFAEHHKMLLYDGKLSGCLAFTYNPRATDAQLCLESSPKDHVSIFVHSPH
ALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDYLQPTGDELDTSVCCTLLSFVMEL
LKGSVAMQEQVLSCKGFLVIGYSLEKSSKVHVTRPVLDIVLAFARYLSNLPTGVLLLKQL
CDHILFNPAIWIHAPAKVQLVLYTYLATEFISTVTIYNAIRRVGTVLQVMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHGIKEDELQSIFNYLLTMH
EDDNLMDVLQLLVALMSEHPASMVQAFDQRNGIRVIFKLLASKSEGIRVQALKVLGYFLK
YLSPKRKSEVMLGHGLFSLLTERLMLHSNQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
STVKIQNPQILKVMAALLKNTSPGAESMEVRRIFLSDMIKLFNNSRENRRSLLQCSVWQE
WMLSLCFINPKNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEQY
KENMAVMFRDYQRMGSSEGSEFRIRTISGASQDSELHVSANGELHAEETAPSTVIELHVE
EQVADRPADGEERRDQVVMSNILAREEEVGKADETATSSETQEKVEGEHETTKELKEDSG
MRKMEDDLKKEADLDSEHVGKDLDKTENDGKNLGIVEEKTDDVTKVEPEAVKMSDDGKMN
EAETEVSAQTEDKEKGSFSSSTEDSSSKAEVVETTEASEVSANQESSVTESSDISQDHVD
EKDNDGAEKVDERKDPETKQEEMSEKDSRDEKDPSKTEETKDEPGPMEEVDLNQSTSTEE
TKLHMEATEGHGAVSQTTLSQPVDSPEEVVENPVPEVSPEAGPNQDSLEAAATESSTAKT
KEIKIARLDVSSVATDTERLELKETSAANASQSQAGPSGSLGQGNDGSSSARFRIPEFKW
SHMHQRLLTDLLFSIETDLQMWRSHSTKTVMDFVNSSENVVFVHNTIHLVSQVVDNLVMA
CGGILPLLSAATSSTHELENIEPSQGLAVEASQMFLQRLINLVDVLIFASSLNFTEIEAE
KNMSSGGILRQCLRLVCAMAVRNCLECQQHTLGKSGAESGHGQQSLMGAAKSIPAQSPVD
IVTGGLSPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDI
LEPHNDKKQVQRTQSSRSTGSVQSDLENGLSPGRRDSSIENDKTSATSNDADTQAGPDAV
SEALSTLSSEVKRGQEVTEKDGKGKNVNVKDILRSLVSAPSDDIIVDASLLPPAFLGAVA
DASRDQNVHFHSFDRSVVMAPKGASTSATVASSGGTPVNSVSVVSADDAVQSTESATGVT
PTSTNLPSVPALSPMTQSSTPSMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHG
QELLSEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDH
LVRVANEAEFILSRQRAEDIHKHAEFESHCAQYTAEKRDEEKMCDHLIRAAKYRDHVTST
QLIQKIINILTDKHGAWGSSSISRPREFWRLDYWEDDLRRRRRFIRNPFGSTHSEATLKA
AAEHAPEEDVLKGKQSIRSSVLGNQNSESELLLEDDDTLSSLEEKELENLTGPVNLSTSA
QLISPAVVVKGTLSITALELYFEVDEEDPSFKNIDPKILAYTDGLHGKWLFTEIRAVFSR
RYLLQNTALEVFMANRTAVMFNFPEAAIVKKVVHSLPRVGVGTNLGLPQTRRISLATPKQ
LYKASNMTQRWQRREISNFEYLMFLNTISGRTFNDLNQYPVFPWVITNYDSEELDLTMPS
NYRDLSKPIGALNPKRAAFFSERFESWEDEQVPKFHYGTHYSTSSFTQMWLLRIEPFTTF
FLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDD
GTVVSDVELPPWAKSPEDFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAIRALNVF
YYLTYEGAVNLSSISEPMIREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQM
QQDVIMVLKFPSNSPVTHVAANTQPGLINSAIITVTANRLFAVNKWHGLSGHQSSSVQDQ
QYQLPVEIDPLIASNVGTHRRQISDLLDQSIQVNSQCFVITADNRFILLCGFWDKSFRVY
STDLGKLTQIVFGHLDVVTCVARSESYIGGDCYILSGSRDATLLLWYWNGKHSTIGEDPG
TEFVTPRAILTGHDCEVTCASVCAELGLVISGCREGPCLIHSMNGDLLRTLEGPEGCMRP
RLVLSSTEGHCVIYYDKGHFCVFSINGKLLGHMEVEDNIKAMFLSKDGQYLLSGGDGGVL
TVWQVHDLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8463 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgccggtgacagcgctgtagggataccgatcagaggcatccgcatgaagttc
gcggtgctggcggggctgcttgaggctggagaagtctccaatcgcgatacagtggagacg
atcttcaatctgctggttggaggacagtttgatctggagatgaacttcatcatccaagag
actgagagcattatctgcatggtagagctgctggataagtgtgactccacctgccaggcg
gaggtttggagcatgttcaccgcagtactgaagaagagcttgcgtaacctacaggcctgc
actgatgtcggcctcatccagctggtgctccagcgcatagacaaggccgacaatatgatt
gcagatctgttggtggacatgcttggggtgctggccagctacagtatcacagtgaaggag
ctgaagctgtttttcagtcaactgaaaggagaacaaggccaatggccaccccatgctgtc
aagctactctctgtgttgaagtccatggctcaaagaaatggcccagattccttctttagt
ttcccagggaagagcgctgcggctattgctcttcctcccattgcaaagtggcctcaccag
aatggcttcacctttcacacctggctgcgcttggaccccctcaataacataaatgttgac
aaggacaagccttatctctactgcttccgcaccaacaaaggtttgggctactctgcacac
tttgtaggaagttgtctgattgtgacctcactaaagtccaaatccaaaggcttccagcac
tgtgtgaaatacgactttaaaccccagaagtggtatatggtgaccatagtgcacatctat
aatcgctggaagaacagtgaaattagctgctatgtcaatggagagttggcatcctatggc
gagatcacctggttcgtcaacactagcgatacattcgacaagtgtttcctgggctcgtcc
gagactgcagacgctaaccgtgtgttttgcggtcagatgggggctgtgtatctatttagt
gaagctctcagcgccgctcagatactggccatctatcagctagggcctggatacaagggc
acattcaagcacaaggccgaaagtgacctgatgtttgcagagcatcataagatgctgctc
tacgatgggaagctgtctggctgtcttgctttcacctataacccccgagccacagatgct
cagctgtgtctggagtcctcgcccaaggaccacgtctccatctttgtgcactctccacat
gctctcatgctgcaggacgtcaaggctgtggtgactcactcggttcagagcgccattcac
tctataggaggagttcaagtgctctttcccctgtttgcacagctggattacctccagccc
actggagacgagctggacacctcggtctgttgcacactactgtcatttgtgatggagctg
ttgaagggctctgtagctatgcaagagcaggtgctgtcctgcaagggctttctcgtcata
ggttactcactggagaagtcttccaaagtacatgtgactcgacccgtgctggacatagtg
cttgcctttgctcgttaccttagcaacttacccactggcgtcttgttgctgaaacagctc
tgtgaccacatcctgttcaacccagccatatggatccacgcccctgctaaggtgcagttg
gtcctctacacttaccttgccaccgaattcatcagtactgtcaccatctacaacgccatc
cgcagagttggaacggtactgcaggttatgcacacgctcaagtatttctactgggttgta
aacccactggaccgcagcgggatcacgcccaagggtctcgatggaccgagacccaatcag
aaggagattcactctctccgagcgtttctgctgctgtttgtgaaacagctcatcatgaag
gatcacggcataaaggaagatgaactgcagagtattttcaactacttgctcacgatgcac
gaggatgataatctgatggacgttcttcagcttttggtggcactaatgtccgagcatcct
gcctcaatggttcaagccttcgatcagaggaatggaatacgggtcatctttaaactgctg
gcctccaaaagtgaagggattcgtgtgcaggcactcaaagtcttgggctactttctcaaa
tatttgtcaccaaagagaaagtccgaggtcatgctgggtcacggcctgttctcacttctc
accgagcgactgatgctccactcaaaccagttcaccgtcacaacatacaatgtgcttttt
gagattcttacggagcagatctgtactcaggtcattcacaaacagcacccggaccctgac
tccacggtgaagattcaaaacccacagatcctgaaggtgatggctgctcttctgaaaaac
acttctccaggagccgagagtatggaggtgcgacggatcttcctctcggacatgatcaaa
ctttttaacaacagccgagagaatcgcaggagtctgctgcagtgctcagtctggcaggaa
tggatgctgtctttgtgcttcataaaccccaagaacagcgaggagcagaagatcacagag
atggtgtacgccatcttccgcatcctcctttatcacgccattaagtacgagtggggaggc
tggcgcgtatgggtggatacactctccatcacacactccaaggtcacctttgaacaatac
aaagaaaatatggcggttatgttccgagattatcagaggatgggttcttctgaaggatct
gaatttagaatcagaacgatctctggggccagccaggattcagagcttcatgtctcagct
aatggtgagctgcatgcagaagagacagctccatctactgtaattgagctacacgtagag
gagcaggttgccgatcggcctgcagatggtgaggagaggcgggatcaggttgtgatgtcc
aatatactggcccgagaagaggaagtgggaaaagcagatgaaaccgcaacctcatcagag
acacaggaaaaggttgaaggtgaacatgaaacaacaaaagaattgaaagaggatagtgga
atgagaaaaatggaagatgatcttaaaaaagaggctgacttggatagtgagcatgtggga
aaagacttggacaaaactgaaaatgatgggaagaatttaggtatagtggaagaaaaaact
gatgatgtcactaaagtagaacctgaagctgtgaagatgtcagatgatggcaaaatgaat
gaggctgaaactgaagttagtgctcagacagaagataaggagaagggatctttcagctct
tccactgaagattcttcttctaaagctgaggtggttgaaacaactgaagcttctgaagtt
tcggccaaccaggagagcagtgtcactgagtcttcagacataagccaagatcatgttgat
gagaaggataatgatggtgctgaaaaggtagatgaaagaaaggatccagaaaccaaacaa
gaggagatgtcagaaaaagactcaagagatgagaaggacccatccaaaacagaggaaacc
aaggatgaaccaggccccatggaagaggtggatttaaaccaaagcacatccactgaggag
acaaaacttcacatggaggctacagagggtcatggtgcagtgtcacaaaccacattaagc
cagcctgttgattcacctgaagaagtagtagagaaccctgtgccggaggttagtcctgaa
gcaggacctaaccaagactctctagaggcggcagcgacagaaagctctacagctaaaacc
aaagagattaagattgccaggctggatgtatcaagtgtggccacggacacagaaagacta
gagctgaaggagacctcggcagcaaatgcgagccaaagccaagcaggtccctcgggttcc
ttaggccaggggaacgatggctcatcttcagcccggtttcgtatcccagagttcaagtgg
tctcatatgcaccagcgtcttctgactgaccttctcttctccatcgagacagatttacag
atgtggagaagccattcaactaagactgtaatggactttgtgaacagcagtgaaaacgtg
gtgtttgtgcacaacaccatacatcttgtctcccaggtggtggacaacctggtcatggcc
tgtggaggaattcttccactgctctctgcagccacctcctctacgcatgaactggagaac
attgagccgtctcagggtttggctgtggaggcatcacagatgttcctgcagaggttgatc
aatctagtggacgtgctgatctttgccagttcgctcaacttcaccgagatcgaggcagag
aagaacatgtcctctggaggcatcttaagacaatgcctacgcttggtgtgcgcaatggct
gtgagaaactgtctggaatgtcagcagcacactttgggtaaatctggtgcagagagcggc
catggacagcaaagccttatgggagccgccaagtctataccagcacagagtcctgtggac
atcgtgacaggggggttgtctcctgtcagagatttagaccgactgctgcaggacatggac
atcaatcgtcttcgtgctgttgtgttcagagacatagaggacagtaagcaagctcagttc
ctggccctggctgtggtttacttcatctctgtactcatggtgtctaaatatcgggacatc
ttggagccgcacaatgacaaaaaacaagtccagagaacacaatcttctagaagcacaggg
agtgttcagtctgatcttgagaacggtctttctcccggccggcgcgattcgagcatagag
aatgacaagacgtccgccacctccaatgatgctgatacacaggccgggccagacgctgtg
tcagaagccctctccaccttgtcctctgaggtcaagagaggtcaggaggtcactgaaaaa
gacggcaaagggaaaaacgtgaatgtcaaagatattttgagaagtctcgtcagtgcgccg
tctgatgacatcatagtggacgccagcctcttaccgccagcgtttctgggtgcggtggct
gatgcctcccgtgaccagaatgtgcatttccactcctttgacaggagtgttgtcatggca
cccaaaggagctagcacatcagccactgttgcatcctcaggtggaactccagtcaacagt
gtgtcagtggtgtctgcagatgatgctgttcagagcacagagtctgccacaggagtaacg
ccaaccagcaccaacctgccatctgtccctgctttatccccaatgacccagagctccacc
cccagcatgagtatttctgagaggttggagcacgctttggagaaggccgctcctttactg
cgagagatttttgtggatttcgcaccgttcctttctcgcacactgctgggcagtcacggg
caggagcttctcagcgagggcacaagtctagtgtgtatgaagtccagcagttctgtggtt
gaattggtcatgttgttgtgctctcaggaatggcagaactccatccagaagaatgcaggc
ttggctttcattgagctagtgaacgagggcaggctgctgagccacaccatgaaggaccat
ctggtgcgtgtcgctaatgaggccgagtttattctgagccgccagagagcagaggacatt
cacaaacatgccgagtttgagtctcactgcgctcagtacacagctgagaaacgtgatgag
gagaagatgtgcgatcacctgatcagggccgccaagtaccgagatcacgtcacgtccacc
cagctcatccagaagattatcaacatcctgacagacaagcatggcgcctggggcagctcc
agcatcagcagaccgcgggagttctggcgcctggactactgggaggatgacctgaggaga
cgtcgacgcttcatcaggaacccgtttgggtccacacactcggaggctacgctcaaggct
gcagcagagcatgctccagaagaagacgtgctgaaaggcaaacaatctatcagaagttca
gtgttggggaaccagaactcagagagtgagctgctgctggaggacgatgacaccctttca
tccctggaagagaaagagctggagaacctcacaggccctgttaacctgagcaccagcgca
caactgatttcgcctgctgtggtggttaaaggcaccctgtcgatcacggccctggagtta
tactttgaggtggatgaggaagacccaagctttaagaacattgatcccaagatactggcc
tacacagatggtctgcatgggaaatggctgttcacagagatcagagcggttttctctcgc
cgttatctgctccagaacacagcgctggaggtcttcatggcaaacagaacggcagtcatg
ttcaacttcccagaagcagccatagtaaagaaggtggtgcacagtctccccagagttgga
gttggtaccaatcttggacttcctcagaccagacggatctctcttgccacccctaaacaa
ctctacaaggcctctaacatgacccagcgctggcagagacgagagatctccaactttgaa
tacctcatgttcctcaacaccatctctggtcgtacatttaatgatctaaaccagtatcct
gtgttcccctgggtcatcaccaactacgacagtgaagagctcgacctcaccatgccaagc
aactacagagacctgtccaagcctattggtgcactcaacccaaagagggctgcattcttt
tcagagcgttttgaatcttgggaggacgagcaggtgcccaaatttcactacggcacacac
tattccacctccagcttcactcagatgtggctactcaggattgagcctttcactaccttc
ttcctgaatttccaaggtggaaaatttgatcatgcggatcgcaccttctcatctgtctct
agagcctggagaaactgccagagggacacatctgacgtaaaggagttgatccctgagttc
tattacctcccagagatgtttgtcaactccaataattacaacctgggagtgatggatgat
gggacggtggtgtcagatgtggagcttccgccctgggccaagagtcctgaggattttgta
cgcatcaaccgactggctttggagagcgagtttgtttcctgtcagctgcatcagtggatt
gatctcatcttcggatacaagcagcagggacctgaagccatccgagctcttaatgtcttc
tattacctgacttatgaaggagcagtcaacctcagctccatatctgaacccatgatcaga
gaggcggtggagtctcaaatcagaagtttcggacagacaccctgccagctgctaatcgaa
ccccaccctccacgcagctctgccatgcaggtgaccccactgatgttcacagagcagatg
cagcaggacgtcatcatggtgctcaagttcccatctaactcgcccgtcacccatgtggct
gccaatacgcaaccaggcctcatcaattcggccatcatcacagtcactgccaaccgcctc
ttcgctgtcaacaagtggcacggcctcagtggccaccaaagctcttccgtccaggaccag
cagtaccagttaccggtggagattgaccctctgatagctagtaacgtgggcactcacagg
aggcagatttcagatcttttagatcagagtatccaagtaaactctcagtgtttcgtcatc
acggctgacaaccgcttcatcctgctttgcggcttctgggacaagagcttccgcgtctac
tccactgatttaggtaaactgacccagattgtctttggtcaccttgatgttgtcacctgt
gtggcccgttcagagtcatacatcggtggagactgttacatactctcgggctccagagat
gccacgctcctgctgtggtactggaatggcaaacacagcaccatcggagaggatcctggg
acggagtttgtgactccccgagcgatcctgacgggtcatgactgtgaagtaacatgtgca
agcgtgtgtgcagagcttggactggtcatcagtggctgtagagagggtccgtgtctgatc
cactccatgaacggcgatctgttgaggactctggagggaccagagggctgtatgcggcca
cgtctagtgctgtcctccactgagggtcactgcgtcatttattacgacaagggccacttc
tgtgtgtttagcatcaatggaaaactcctgggacacatggaggtggaggacaacatcaag
gcgatgtttctgagtaaagatggacagtatctgctatctggaggagatggaggcgttctc
actgtgtggcaggttcatgatcttaaacagctcttcacttacccgggatgtgatgctgga
atacgctccatggctatgtcacatgaccaaagatgcatcatcactggtatggcgtctggt
agcattgtcctcttctacaatgacttcaacagatggcaccacgaataccaaactagatac
tga
DBGET
integrated database retrieval system
