Paramisgurnus dabryanus (large-scale loach): 135735988
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Entry
135735988 CDS
T10799
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135735988 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135735988 (slit2)
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Heparan sulfate / Heparin
Axon guidance molecules
135735988 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRRCT
LRR_9
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
LRR_EndoS
EGF_3
EGF_Teneurin
EGF_CA
cEGF
Laminin_G_3
EGF_TGFA-like
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
135735988
NCBI-ProteinID:
XP_065110777
LinkDB
All DBs
Position
4:complement(43630831..43716913)
Genome browser
AA seq
1535 aa
AA seq
DB search
MFVLKAAVCLGALLCALLGSAGAQSCPSQCSCSGTAVDCHGQSLRNVPRNIPRNTERLDL
NANNLTKITKADFAGLRNLRVLQLMENKITSIERGAFQDLKELERLRLNRNNLQVLPELL
FLGTTKLFRLDLSENQIQGIPRKAFRGATEIKNLQLDFNQISCIEDGAFRAMRDLEVLTL
NNNNISRLSVASFNHMPKLRTFRLHSNNLLCDCHVAWLSDWLRQRPRLGLYTQCMAPPPL
RGHNIAEVQKKEFICTGPQSHSSCSVLQCPELCTCSNNIVDCRGKGLTEIPTSLPETITE
IRLEQNSIKIIPPGAFSPYKRLRRIDLSNNQITEVASDSFQGLRSLNSLVLYGNKITELP
KGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRAIQT
LHLAQNPFMCDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQY
FIPGVEDYRSKLGGDCFADLACPEKCRCEGTTVDCSGQKLTKIPDHIPQYTAELRLNNNE
FTVLEATGIFKKLPQLRKINLGNNKITDIEEGTFEGANGVNELILTSNRLESVHFSMLKG
LGGLRTLMLRSNKISCVNNSSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSLSTLNLLAN
PFNCNCHLAWLGEWLRKKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGNDENSCSPQ
ARCPAECSCLDTVVRCSNKGLNVLPKGIPKDVTELYLDGNQFTQVPLELSNYKHLTLIDL
SNNQISTLSNHSFSNMSELLTLILSYNKLRCIPVKAFDGLKSLRLLSLHGNDIAVIPDGA
FKDLSSLSHLALGANPLYCDCNMQWLSDWVKSGYKEPGIARCTGPGEMTDKLLLTTPSKK
FTCTGPVDVNILAKCNPCLSNPCKNDGTCSNHPVDFYRCTCPYGFKGQDCEEPIHACISN
PCQNGGTCQLKDGDENTHWCVCPDGFEGDDCEINIDDCEDNDCENNSTCVDGINNYTCLC
SPEYTAANNNEVEKGELCEDKLDFCASELNMCQHDSKCIRTAKGFTCECTPGYTGEHCEV
DFDDCGDNKCKNGAQCIDAVNGYTCVCPEGYSGLFCDFTPPMVLPRTSPCDHYDCANGAQ
CVVKDTDPLCQCLHGYEGVHCERLVSVNFINRESFLQIPSNLISEQANISLQIATDEDNG
VLLYKGDNEHIAVELYRGRLRVSYDSGSYPPSAIYSVETINDGSFHVVELVAKDQSLSLS
IDGGSPKSITTANNPSAVPSPAPLYLGGIPQQSGLASLRQGPGRNGSSFHGCIRNLYIND
QLQDLTQFLLQEGVVPGCQPCQQSVCVHGQCHTTGHSSFSCECEAGWTGQLCDQQINNPC
DGNKCIHGSCLPINSYSYSCRCHPGFVGVLCDEEEQSSPCQFIACKHGRCRISGLGKAYC
ECNSGYTGQNCDREMACRGERVRDHYQTQQGYAACQSTEKVSRLECRGSCGDGTSCCAPL
RSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCPSS
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgttgaaagcggcggtgtgtttgggagctttgctgtgtgcgctgcttggcagt
gctggggctcagtcgtgcccgtcacaatgctcctgcagcgggacagcggtggactgccac
gggcagagtctgcggaacgtgccacggaacattccccgcaacactgagcgccttgacctg
aatgcaaataatctgactaaaattactaaagcagactttgcgggactgcggaacctcaga
gttctgcagctgatggaaaacaagatcacttctattgaaagaggggcatttcaagacctg
aaagaactggaaagactgcgtctcaacaggaataatcttcaggtccttccagagttgctg
ttcctcggcacgaccaaactcttcaggctcgatctgagtgaaaatcaaatccaggggatt
cccagaaaagccttcagaggagctactgagatcaaaaacctgcagttggactttaatcag
atttcctgcattgaagacggagcgttcagagccatgcgggacttagaagtactcacactg
aacaacaacaatatctctcgtctgtcagtggctagttttaaccacatgcccaagctcagg
acatttcgcctgcattctaataatctgctatgtgattgtcatgtggcttggctttctgat
tggctaagacagaggccccgccttggcctctacacacagtgcatggccccgcccccactg
aggggccacaatattgcagaggttcagaagaaagagtttatctgtacaggaccccagtct
cactcgtcctgtagtgtattgcagtgtcctgaactgtgcacctgcagtaataacatagtg
gactgccgggggaaaggactgaccgagatacccaccagcctgccggagaccatcactgag
atccgactggagcagaattccatcaagataatcccaccaggagcgttctcaccttacaag
cgactgcggagaatagatttgagtaataatcaaataactgaagtggcgtcggattccttt
caaggtctcagatctctgaattctctggttttatatgggaataaaatcactgaacttccc
aaaggcctttttgatggactcttctcattgcagctactgttgctaaatgcaaacaaaatc
aactgtttgcgtgtggattcttttcaagacctgcagaatctgaatcttctctcactttat
gacaacaaactccagaccatcgcaaagggaacattttcttctcttcgagccatccaaaca
cttcaccttgcccagaacccctttatgtgtgattgccatctgaagtggcttgctgactat
ctgcaagacaacccgattgagaccagtggtgcccgatgcacaagtccccgtcgccttgcc
aacaaacgcatcggtcagatcaagagtaaaaagttccgctgttcagctaaagagcaatac
tttataccaggtgtggaagactaccggtctaaactcggtggggattgtttcgctgacctg
gcctgcccagagaaatgtcgctgtgaaggaaccacagtagactgttctggacaaaaactc
actaagatcccagatcacatacctcagtatacagcagaacttcgcttgaacaataatgaa
tttacggtgctggaggctacaggaatctttaaaaagctgccacagctgcgaaaaattaac
cttggcaacaacaagatcactgatattgaggagggcacgtttgagggagcaaatggtgtg
aacgaactcatactgaccagcaaccgcttagagagcgtccactttagcatgctgaaaggc
ctcggcggtctgcgcaccctgatgttgaggagtaacaagataagctgtgttaataacagc
agttttactggtctgagttctgtgaggctgctatccctctatgataacctgatcacctcc
atgtccccgggagcctttgacacgctacactccctgtccacgctgaacttactggccaat
ccgttcaactgtaattgtcatctggcctggctgggtgaatggctccgtaagaaacgtatc
gtcacgggcaacccgcgctgtcagagcccttactttcttaaggagatccccattcaagat
gtagccgtacaagactttgcctgcgaggacggtaatgatgagaatagctgttcgccgcag
gctcgctgccctgccgaatgttcgtgtttggatacggtggttcgctgcagtaataaagga
ctaaacgttttacccaagggcattcctaaagacgttacagagctctatctcgatggcaac
cagttcacgcaagtccccctggaactatccaattataaacacctcactctcattgatttg
agtaataaccagatcagcacattgtccaaccacagcttcagtaacatgtccgagctgctc
accctaattttaagctacaacaaactgaggtgtattcctgtgaaggcttttgacggtctc
aaatctctgcgcctattgtctctccatggtaatgatatagctgtgatcccagatggagct
ttcaaagatctgtcctctctctcccacctggctctgggagcaaacccactgtactgtgat
tgtaatatgcagtggctctctgattgggtaaaaagcggctataaggagcctggtatcgca
cgctgcactggtcctggagagatgaccgacaaactacttctgaccacaccctctaagaaa
ttcacctgcacaggtccagtggatgtgaacattttggccaaatgtaatccgtgtttatcc
aacccctgcaagaacgacgggacgtgcagtaaccatcctgtcgatttttacagatgtaca
tgtccatatggatttaagggtcaagactgtgaggaaccgattcacgcgtgcatcagtaac
ccgtgtcagaatggaggcacgtgtcagcttaaggacggagatgagaacactcactggtgc
gtgtgtccggatggattcgagggcgatgactgtgagataaatattgatgattgtgaagat
aatgactgtgagaataactcaacgtgtgtggatggcatcaacaactacacttgtctctgc
tcacctgaatacacagctgctaataataatgaggtggagaaaggtgagctatgtgaagat
aagctggatttctgcgcttcagagttgaacatgtgtcagcatgactccaaatgtattcgg
actgctaagggcttcacgtgcgaatgtactccaggttacactggagagcactgcgaggtg
gatttcgatgattgtggagataataagtgtaaaaacggagctcaatgtattgatgctgtg
aatggctacacctgtgtgtgtccagaagggtacagtgggttgttctgcgacttcacccca
ccaatggtactacccagaacaagtccctgtgaccactacgactgtgccaacggtgcacag
tgtgttgtcaaagacacggatccgttgtgtcagtgtctccatggttacgaaggcgtgcac
tgtgagaggctggtcagcgtcaacttcatcaatagagaatctttcctgcagatcccatcc
aacctcatctcagaacaggccaatatatcactacagatcgccacagatgaggacaacggt
gttttgctgtataaaggagataatgaacacattgctgttgagctttacagaggcagactg
agagtcagttatgactctggatcatatcccccatctgccatctacagtgtggagacgata
aatgatggcagttttcatgtagtagagctggtagcaaaggatcagtctctgtctctgtct
attgatggaggcagccccaaatccatcactactgctaacaatccaagtgcagttcccagc
ccggctccgctttatctcggcggaattccacagcagtctggattggcctcattgcgtcaa
ggtcccggcaggaacggatccagtttccacggctgtatccgaaatctctacattaatgac
cagctgcaggacctcacccagttcttactgcaggagggggtggtgccaggctgccagccg
tgtcagcagagtgtgtgcgtccatggccagtgccacacgaccggacactcgtccttcagt
tgtgagtgtgaggcggggtggaccggtcagctgtgtgaccagcaaatcaacaacccgtgt
gatgggaacaaatgtattcacggctcctgtctgcccataaactcatactcgtacagctgc
cgctgtcatccgggctttgttggtgtgttgtgcgatgaagaggagcagtcgagtccctgt
cagttcatagcgtgtaaacacgggcgctgtcgcatttcaggcctggggaaggcttactgc
gagtgcaacagcggatatacgggacaaaactgtgacagagagatggcgtgtcggggggaa
cgggtccgagatcactatcagacgcagcagggatatgcagcgtgccaaagcacagagaag
gtctcccgcttagagtgtcggggcagctgtggtgacgggacgtcctgctgcgcccccctc
cgcagcaagcgcaggaaatacaccttccaatgcacagacggatcctcttttgtacaggaa
gtggaaaaggttgtcaaatgtggctgcacaaaatgtccttcttcctaa
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integrated database retrieval system
