Paramisgurnus dabryanus (large-scale loach): 135736026
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Entry
135736026 CDS
T10799
Symbol
dchs2
Name
(RefSeq) protocadherin-23 isoform X1
KO
K16507
protocadherin-16/23
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135736026 (dchs2)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Cadherin related
135736026 (dchs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_pro
Cadherin_4
Beta-tre_PLH30
Motif
Other DBs
NCBI-GeneID:
135736026
NCBI-ProteinID:
XP_065110853
LinkDB
All DBs
Position
4:complement(44806411..44871075)
Genome browser
AA seq
3236 aa
AA seq
DB search
MEFYARTLLQFFLTTLLCQGCCAQVFNLSLFVEEGLPAKTVVGDIRDGLPVNITGSGFFI
SESKDSDVFRDLKIDGDTGIISTAVVLDRERVDKYEFAAATLTGEVVKVIIEVKDVNDNF
PVFRVKTIQLNVSELSPPGTRFELEGAEDQDKGAYGIQGYRITDGDARKIFTVEVRNSGG
DMFNVDLILRERLDRETTDSYSLTIETFDGGIPPKTGQLQVYITVLDENDNQPVFNQTEY
RAVILESAPLMTPVCQVFATDPDFGSNGEVTYDINRRQSDPNEYFIVDSSSGIIRLNKHL
DHEKQSFFELMVTAWDSGSQPESSNAFVGIKILDVNDNHPNISILFLNEAGAPKVSEGAW
RGEYVARIAVSDPDLGELKKIDVVLQGGDAMFTLKSTDDFLYVLCVDGKLDREVNDMYEL
TVIASDYGSPPLRSKTTFQVQVTDVNDNPPVFEQNTYEESIPEDVHEGTALLQVKATDRD
QGENSEIIYSFVQSEKEHLFSIDTKTGVIITAASLDYEKQRELMFLVVATDGGSPSLSAT
ATVNIHVTDINDNKPIFQQQFYNITIKEHTAVGTCILQVTATDADDAEFGKVQYSLCDGY
ISEDAHPFFNINSVTGEICVSQDIDYEAGFVTFDLLIKAEDQDGLNSQTFVHIDVEDVND
NSPVFNPERYITSISCHAQPGTELLSVFASDQDSGINGEITYELLPGDSASLFSVDQSTG
SVYLNSSLSQLHSSSVKLSISARDGGGLSTIHPANITMSVLYSEQPPAFFQKSHYSFFIS
EDAPVGSTVGLVKAVTPANSVEVVSYIISSGDPQGLFSVDAQTGVITTNKPLDHESLSCV
LLILQFHTGTFPIYSIAQVNVSITDVNDNPPVFQKTSGRITISHNTPPGTPFFIAHAEDR
DGGLNGKIRYTLLPKSQLFTIHPHLGTLTLSNDLSRDSRQRYELSVIAKDEGQPSLNSTL
DLVIEMDSSGFAEDTLAFETLVYQVEIGENAQKDTRVIQVRAYSSRARSRGNFAMTYSLK
PITGVPPFKIHPESGWMFVSQRLDYETEPTYRFSICASMQDGPMEATATATVVVVVKDEN
DNAPVFERDVYFFSMQEGPSPHGLIGTVKATDRDSHNNAVLTYILLSDGKHFSINPRTGE
IINLVALDREEQAQHVLRVMVTDQGRPRLNATSVVYILVTDINDNPPQFMHLPATKQLNV
QVWTGIPEGSVVISMFAKDLDAGENGTVKFFIKDDHMGHFSIDSHSGDVTVTEQFSLNPQ
MHYTLNVVAKDNGSVPLEETAAIHIQVYAFDEQNGPSDFQGFRHFTVREDVRLGSVIGSL
EITKAPDTHLRYSVVEGDGTLQFGINSGKLYVAQHLDYEVTQRYFLVVHAEAPPTFNATV
FVVISVTDVNDYAPWFPYNDNIVVFGVHEDVTNGSQVYAFNARDADGSLQNSELYYNLAF
DSELAKDELPFHINPQTGVVTTNAQLDREHSESFVFKVTARDLVDDPNDQKYSSVIAQVI
LLDVNDNIPTFVSMETASVSEDTEEGHLVHHVKARDEDEGSNGQLIYSIISGNEKGCFNM
EKTGHLYLNSSLDYESQHVHILTIQATDRGIPSLSSTQTLTVEVLDVNDQPPVFQQQVYN
VTVMENRERGEIIVTVTAVDMDSEENAAVSYSLLPSSGYELFMINSHTGQISTSTCLDRE
ICSSFTLRVQAEDSGTPSLSSTATVICSVLDDNDNAPEFSQPDFHIIIPENLPPGVIHTV
QASDVDNGPNGTIQYSMEDAEKCFSIDSVTGAVSTARVLDREERTNYTLLITAADHGDPP
LSATTLLNITLSDENDNVPSFTRKTYRATIREDLPANSEVIRLIARDADEGSNGVVTYSL
LEENSGNFYVEGSTGVIRLTRSLDRETRSQHVFRAVATDGCRQGPRSSVAIVTIQVEDIN
DNPPSCIEEPMRVSVSFTSTYLHQPIITVTARDPDQGDNGTVVFRLSDEYELFQVDRLSG
DVRFKAPLKTGVSGTHLLRVEAADMGTPSLTSTCLLLIQLNGDEPLLQFTEELYEVTILE
NSKKGSWVANVVAYDHTADEATIKYSIFSGNENEAFTINTSTGDIIVGEEKLLDFEVERK
IHLVVLAENGQQTAYARVTITMQDVNDNAPVFKQSYYRTAVWEGQIHNTYVMQVLATDSD
SGANGQISYFIVDGNHNNAFVIDSVRGILATNTVLDREIVSSYKLIIQAKDMGSPPLTGT
STVRVHVVDVNDNSPTIPSMEQVTIVENLPVGHIVTQVIANDVDLSPAATFRFIGKDETS
FAIDRYSGIITTTKRLDYETQTVYTLRVEASDSVHQTVAELSIQVMDINDNPPVFSQESY
QVILPEWTPADSYVMTVSANDRDSGQNGNISYRLLSSPMTGFYIDAENGSVFTNRPLKHI
PNGNILRLLVEARDSGDPKLFSVTSVDIEVADSNDHAPYFTQNSYLVNVPEDASVGSTLL
TLSAEDKDYSSENTYLEYTIVGGNDERRFCLDVVSIQTFEAHRQTIGQVVLCDSLDRETT
DIYMLTVIVTDRGMPPLNSTTVVTVKVLDINDHAPVFGSTEYHTQIRENSPIGAILIQVS
AHDLDLGNNGTVKYNIISGNSRGLIRLDPTTGILDVMGTLDYEEDTKLTLIIQASDCAAP
NDKKVSFAVVYISVLDENDNAPFFVFPIINCSVAENLPVFTPVCTAHAVDEDAGNFGLLT
YSVETPCFMDYDSTNPDRKEAFGINPSTGEIHTKQTFDFERASEYCFVVEARDKGDQVAT
LKVQINIEGIDEFSPIFTQNVYHFSLPHNAKVGQSIGHVMAMDHDGGLDGLVEYSLVNPS
PFFNVSKTTGSIFILNPVYQRGSSMLKETIENLLVLASSPKLDSRSSSCHVIVNISSSEK
ASVSLSVQATSVSVSLLVFFLFLISIIALVIRYKSKEKSSKKTASISANLNQETDTFGRI
GGNLHSINGINLQDLQTPLNAWAKLDIANQLRNSDSSGRGSAEDETAEDQEIKSINKFSY
YKPFRSIPTQVSNSETSVDSNLEHSSNKELSSGANIGIVQIVDMASSESLHNFREEGGGE
GMLPQVVNMREVQEVMKRCMSMPGERGWIEGSLTNLISSEEQLHGGDYFLSWQPRFQTLA
SVFTDIGMLPDEEMRDGDVDPESHSLLYPPPLITAVAQPGIRAVLPRMPSRKPTLLHTGN
TGLTPSAMTPSFSPSLSLLTVRTPSTSPVVSETGLGCYTKISTLPKDVIEDLEVQL
NT seq
9711 nt
NT seq
+upstream
nt +downstream
nt
atggagttttacgcacggactttgctgcagtttttcttaacgacattactgtgtcaaggt
tgttgcgcgcaggtgtttaatctcagtctttttgtagaggaaggattacctgcaaagact
gtcgtcggagatataagagatggactacccgtaaatatcacaggttctgggttctttata
tctgaaagcaaagattcagatgtgttcagagacttgaagattgatggagacaccgggatc
atctccaccgccgtcgtgttggaccgagagcgcgtagataagtatgagtttgcggcggct
acattaacaggagaggttgttaaagttatcattgaggtcaaggatgtaaatgataatttc
cctgtgtttcgcgttaaaacaatccagttaaatgtgtctgaattaagtcctcctggaacc
cgttttgagctagaaggagctgaagaccaggataagggtgcttatggcatccagggctac
agaattacagatggagacgcgaggaagatttttacagttgaagtccgcaacagtggaggt
gatatgttcaatgtagaccttattctgcgagaaagattagatagagaaactacagactcc
tatagtctcacaattgagacatttgatggtggtataccaccaaaaactggccagctacag
gtgtatattactgtactggatgaaaatgacaaccagcctgtgttcaatcagaccgagtat
cgtgctgtcatattggaaagtgcaccattaatgactcctgtctgtcaggtatttgcaaca
gatccagattttggcagcaatggagaggtcacttatgacatcaaccgtcgtcaaagtgac
ccaaatgagtatttcattgttgatagctcctcaggtatcattagattaaataaacatttg
gatcatgagaaacagtcgttttttgagctcatggtgacagcatgggattctgggagtcag
cctgaatcatctaatgcttttgtgggtattaaaatactggatgtgaatgataaccaccca
aatatcagcattctgtttttaaatgaggctggagcacctaaagtatcagagggagcatgg
cggggggaatatgttgccaggattgcggtctcagaccctgatttaggggagttaaagaag
attgatgtggtcctccaaggtggggatgcaatgttcacgctcaaatccactgatgatttt
ctttatgtactctgtgtggatggaaaactggaccgagaggtaaatgacatgtatgaactc
actgtgattgcctcagattatggctcgcctcccctaaggagtaaaacaacatttcaagtt
caggtcaccgatgtgaatgacaatccacctgtttttgaacaaaacacctatgaggagagc
attcctgaggatgtacatgagggaacagctctcttacaggtgaaggccacggacagagat
caaggagagaactctgaaatcatttattcttttgtacagtcagagaaagagcatctgttt
agcatagatacaaaaacaggtgtcattattactgctgcaagcttagactatgagaaacag
agggagctgatgttcttagtggtggctactgatggtggttctccatctctctctgccaca
gccactgtgaacatccatgtaacggatatcaatgacaacaaacccatatttcagcaacag
ttctacaacataaccattaaagagcatacagctgttggaacatgcatcttacaggtcact
gccacagatgctgatgatgctgagtttggaaaagtgcagtattcgctctgtgatggctac
attagcgaggatgcccaccctttcttcaacatcaactctgttacaggggaaatctgtgtc
tcccaggacattgactatgaagctggctttgtgacctttgacctgctaattaaagctgaa
gatcaagatggtcttaattcgcagacattcgttcacatcgatgtggaggatgtgaatgat
aattctcctgtttttaatcctgagagatatatcacaagcataagctgccatgcccagcct
ggcactgaactcctcagcgtatttgcttctgaccaggattctggcatcaatggggaaatc
acttatgagctactacctggagattctgcctctttattcagcgtggaccagtcaacagga
tcggtctacctgaactcttcactgtctcagctgcatagtagcagtgtaaaactgtccatc
tcagctcgggatggaggagggctgtctaccattcatcctgctaatatcaccatgagcgtc
ctgtacagcgaacagccccctgctttcttccagaagtcccactacagcttcttcatctct
gaggatgcacctgtaggctccactgtcggtttagttaaggctgttacacctgccaattca
gtggaggtagtctcatacatcatttcatctggtgatccacaggggcttttctcagtagat
gcccagacgggcgtcatcaccacaaacaaacctcttgaccatgagtccctctcctgtgtt
ctcctgatcttacagttccacacaggaacctttcctatctacagcattgctcaggtcaat
gtttccataacagatgtcaacgacaaccctcctgtattccagaagacctcagggcgcatc
acaatatcacataacacccctccagggacaccattcttcattgcacatgctgaagataga
gacggcgggcttaacggcaaaattcgctacacgttacttcctaagagccagttgtttacc
attcacccacaccttggaactctcactctgagcaatgacctgtctagagattctagacag
agatacgagctcagtgttatagcaaaggatgagggtcagccttcattgaactctacccta
gatcttgtgatagagatggactcttcaggctttgcagaagacacactagccttcgaaacg
ctggtttaccaggtggaaattggagaaaatgctcaaaaagacaccagagtaattcaagtt
cgtgcttatagttccagagcccggagcagaggaaactttgccatgacatactctcttaaa
cctatcactggggtgccaccattcaagatccacccagagagtggatggatgtttgtatcg
caacgtcttgactacgaaactgaacccacttacagattcagcatctgtgcaagcatgcaa
gatggtccaatggaagccactgccacagcaactgttgtggttgtggttaaggatgagaat
gacaatgcacctgtattcgaaagggatgtgtatttctttagcatgcaggagggaccatcc
cctcatgggttaataggaacagtaaaagccacagacagagattctcataacaatgcagtg
ttaacctacatcttgctgtctgatggaaaacactttagcatcaaccccagaacaggagag
atcataaacctggtggctttggatcgtgaggagcaagcacaacatgtgctacgggtgatg
gtgacagaccagggtcgtcctcgtcttaacgccaccagtgttgtttacattctagtcaca
gacatcaacgacaaccccccccaattcatgcacctgcctgcaaccaaacagttaaacgta
caggtgtggacaggaattccagagggttctgttgtaatcagtatgtttgctaaagacctg
gatgctggagaaaatggaactgtcaagttcttcattaaagatgatcacatggggcacttt
agtattgacagccatagtggggatgtcacggtgacggagcagttctccttaaaccctcag
atgcactacaccctgaatgtggttgctaaagacaatggctcggtacctctggaagagact
gcagctatacacatacaggtttatgcatttgacgaacaaaatggaccctcagatttccaa
ggctttagacatttcaccgtgcgagaagatgtgaggcttggaagtgtcattggttcactt
gagattactaaggcacccgatacacacttgcgatattctgttgtggagggtgatggcact
ttgcagtttggtatcaatagtggcaagctctatgtggcacagcatctggactatgaagtc
acacaacgttattttttggttgtacatgcagaagcccctcctactttcaatgccactgta
tttgtggtgatcagtgttactgatgtcaatgactacgctccctggttcccatacaatgac
aacattgtggtgtttggtgtccatgaagatgttactaacggatcacaggtgtacgccttt
aacgcacgcgatgcagatggaagcctgcaaaacagtgagctttattacaatttggccttt
gactctgaacttgccaaagatgaactgcctttccacatcaaccctcaaactggagttgtc
acgacaaatgcacagttggatcgtgagcacagtgagagctttgtatttaaagtgactgcc
agagaccttgtggatgaccctaatgatcagaaatactcctctgtgatagctcaggtgatt
ctgttggatgtcaatgacaacatccccacgtttgtttccatggaaacagcttctgtctca
gaggacacagaggagggacatttggttcatcatgtaaaagccagagatgaagatgaagga
agtaatggacaattaatatacagtattatatcaggcaatgagaagggctgctttaacatg
gaaaaaacaggacatctgtatcttaactcttctctggattatgaatcccagcatgtccac
atcctcacaatccaggccacagaccgtggcattccctctctttcttccactcagacactt
acagttgaggttttggatgtgaatgaccagcctcctgtgttccagcagcaagtttacaat
gtcacagttatggagaacagagagcgaggagagattattgtcacggtcacagcagtcgac
atggactcagaggaaaatgctgccgtgagctacagcttgctgcccagttcaggatatgag
ctcttcatgataaactctcacactggtcagatcagcacctccacatgcctagaccgagag
atctgctctagttttactctcagagttcaggcagaggacagtggaaccccctctctctcc
agcactgccacggtcatctgctctgttctcgatgataatgacaacgctccagaattttct
caacctgactttcacataataatcccagagaatttgcctccaggagtaattcacacggtc
caggcctcagatgttgataatggaccaaatggaacaattcagtactcaatggaagatgca
gaaaagtgtttcagtattgacagtgtgactggagcagtcagcacggctagagtcttggac
agagaggaacgtaccaactacaccctcctcatcactgcagctgaccatggggatccccct
ctgagcgccactacactcctaaacatcaccctctcagatgaaaatgacaacgtcccctcg
ttcactcggaaaacataccgtgccaccattagagaggatcttcctgccaattctgaggtc
atacgactcatagcacgggatgctgacgaggggtccaatggtgtcgtcacctactcctta
ttggaggagaactctggaaacttttacgttgagggctccacaggtgtgatacgactgacg
aggtcactggaccgcgaaactcgctctcagcatgtttttcgtgctgtagctactgacggc
tgcagacagggcccacgcagctcagtcgctatagttacgatacaggtagaagacattaat
gacaatccaccatcatgtattgaggaacccatgcgggtttcagtctctttcacctccaca
tatctccatcagcccatcatcacagttacagcccgtgatccagaccagggagataatggc
acagtggtttttagactatcagacgaatatgagctgtttcaggtggataggctttctgga
gatgtgaggtttaaagctcccttaaagactggggtttcagggacacatttgctccgtgtg
gaggctgcagatatgggtacaccttccctcacctccacctgccttctgcttattcagttg
aatggagatgagccactgttgcagtttacagaggagctctatgaagtcaccatcctggag
aacagcaagaaaggttcttgggtggcaaatgttgtagcttatgaccatacagcagatgaa
gctacaatcaagtacagtattttcagtggcaatgagaatgaggccttcacaattaataca
agtacaggagatatcatagttggggaagaaaagctgctagacttcgaagtagagcgcaaa
attcatctcgtggttctggctgaaaatggacaacagacagcttacgcaagagtgaccatc
actatgcaggatgtcaatgacaacgcaccagtgttcaagcaaagctactacagaacagct
gtctgggagggacaaattcacaacacttatgttatgcaggtgttagccacagattctgac
agtggtgcaaatggacagatcagttacttcattgtggatgggaaccacaataatgcattt
gtgatcgactctgttcgtgggattctagccaccaatactgtccttgacagagagattgtc
tcctcatacaagttaataatacaggccaaagacatgggaagcccccctctcacaggcacc
tccactgtccgtgtccacgtcgtagatgtcaatgacaatagccctacaataccatccatg
gaacaagtgaccatcgtagaaaatcttcctgttggccatattgtcactcaagtaattgca
aatgacgttgacctcagtcctgcagcaacgttcagatttatagggaaggatgagacaagc
tttgcaattgaccgctattcagggataattaccacgactaaaagactggattatgagact
caaactgtctatacactgagagtggaagcatcagactctgtccatcaaacagtggctgaa
ctctccatacaggtgatggatatcaatgataacccccccgttttctctcaagagtcttac
caggttatattgccagagtggacacccgcagattcatatgttatgactgtttcagcaaat
gatcgagactctggacaaaatggcaacatttcttataggcttctttcctccccaatgaca
ggattctacattgatgctgagaatggttcagtgtttaccaaccggcctctgaagcatatt
ccaaatggaaacatcctgcggctcctggtggaagcacgggacagtggtgacccaaaactg
tttagcgtcacatctgtggacatagaggtggcagactccaatgatcatgccccttacttc
acacagaactcatacctggtaaatgttccagaggatgcgtctgttggaagcactctcctc
actctgtcagcagaagacaaagactattcatctgaaaacacttatttggagtacacaatt
gtaggtggaaatgacgaaaggcgcttctgtctagatgttgttagcattcagaccttcgaa
gcccacagacaaactattggacaagttgtgctctgtgatagtctggatcgagagacaact
gacatttacatgttaactgtgattgtaacagacaggggaatgcctccacttaacagcaca
actgtggtgacagtcaaagtacttgatattaatgaccatgcacctgtttttggtagtaca
gagtaccatacacaaatccgtgaaaacagccctataggtgctattcttatccaggtctct
gctcatgatcttgatctgggcaataatgggacagtaaaatacaacattatttcaggtaac
agcagaggattaatcagattggatcctacaacaggtatccttgatgttatgggtaccctc
gactatgaagaggatactaaattgaccctaataatccaagcctcagactgcgctgctcca
aatgacaaaaaggtatctttcgcagttgtttacatatcagtactggacgagaatgacaat
gccccattcttcgtgttccctatcatcaactgctcagtagctgaaaaccttccagttttt
acccctgtatgcaccgcacatgctgttgatgaagatgcaggaaactttggactactgacc
tattcagttgaaaccccctgtttcatggactatgacagtactaatccagacagaaaagaa
gcctttggtattaatccatctactggagaaattcacacaaaacagacattcgactttgaa
agagcaagtgaatactgctttgtggtagaggcacgtgacaaaggagatcaggtggcaacc
ttgaaagtacagatcaacatcgagggcattgatgagttcagccctatatttactcagaat
gtgtaccatttctctctgccacataatgccaaggttggccaaagtattggtcatgtgatg
gctatggatcatgatggtggtctggatggcttagtggaatactctttagtcaacccatcc
ccatttttcaatgtcagcaaaacaactggcagtatatttattttaaacccagtgtatcag
agaggaagctccatgttaaaggagacaatagagaatctattggttctggcaagcagcccc
aaactggattccaggtcatcaagttgtcatgtaattgtgaatatatccagttcagaaaaa
gcaagtgtttctcttagtgtccaagccaccagtgtcagtgtgtcattattagtgttcttc
ctatttttgataagcatcattgcacttgttataaggtacaagtccaaagagaaatcttcc
aagaagacagcctccatatctgctaacctcaaccaagagactgacacttttggtaggata
ggtggtaatcttcatagcatcaatggtataaaccttcaagatttacaaacaccattaaat
gcgtgggcaaaacttgatattgcaaaccaattgaggaactcagactcgagtggaagagga
tctgctgaggatgagactgctgaggatcaggagatcaaatcaatcaacaaattttcatat
tacaagccgtttaggtctatcccaacacaagtctcaaactcagagaccagtgtggactca
aacttggaacactcttccaataaagagctgtcttctggtgccaatataggaatagtccaa
atagtggacatggccagctctgagagtctccacaattttagggaagaaggaggaggtgag
ggaatgcttcctcaggtggtcaacatgagagaagtgcaggaggtcatgaaaagatgcatg
tccatgcctggtgaacgtggttggatcgaaggctcactcaccaacctgatttcctctgag
gaacagctacatggcggagactactttcttagctggcaaccacgcttccaaactttggcc
tctgtttttacagacattggcatgcttccagacgaagagatgagggatggggatgtggat
ccagagtctcatagccttctgtacccaccgcctctcatcacagcagttgcccagccagga
atacgtgctgtccttcctaggatgccaagtagaaaaccaaccctactacatactggaaac
acaggattaaccccttcagcaatgacccccagtttctcaccatccctgtcgctacttact
gttagaacacccagtacttctccagtggtctcagaaacagggttgggatgctacacaaaa
atatcaacactgccaaaagatgtcatagaggatctagaggttcaattgtag
DBGET
integrated database retrieval system
