Paramisgurnus dabryanus (large-scale loach): 135736048
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Entry
135736048 CDS
T10799
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135736048 (zc3h13)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
135736048 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
135736048
NCBI-ProteinID:
XP_065110894
LinkDB
All DBs
Position
4:complement(47022240..47324065)
Genome browser
AA seq
1688 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSNSTTTPSRRPSVFERLGPSTASNAAETHCRNWLKTGNC
SYGNTCRYTHGTPSQEKGFSTKFNRSAERPTGDLRERMKNKRQDVDADTQKRDTDKPTSP
TTRQQDSSKIRQREKKEDIKITKEHTPASEEETVDWEASREDSDNGDYDYELSLEMKRQK
IQRELMKLEQENMDKREDVIIKKEEVSKTRNSGSLKDKASPKPSSSKGSPLSRKSSCSPK
HKATGKSGTSSKKEKSSTFSVISCPVSDQPRADKTDGRSSKSSHSRKKGPRTPSPPPPVH
VGPPVAGKKHKNKHKNKEKTDEKLKEGKERGCDLEKHKEKKEKRRCRTPPRHRCSPSPHS
RQQHSPSSHSGSSALRQSPSPRRRQGSVSPPYQQDFPPPSSFSPPPIQSSRHSHSPLTPH
REASPSPTPRRSSPSSNHRSQARERGRGERERSPVIQERRHERKDESRMNREKDSCRDER
DYEIERISVRDGCDAKDSRDRRGERDRRDARDERHHRGEVKDSRDTYATETRDRSGQESL
EHRERERDRERERKEPHRKEETSQEDRSYGRGHGKEEVKIETRVEIRNESRGERTGRGRG
RGSDSLDQKGSARGSRASQGDTSGTHGHESWEPRSSFRDRSSERNSDRDRYDNDRSRGEQ
VRDDRRVGHAERDCRDNREREQRASPRHQQNRGEDLEERRDDRRNDRGEERREDRIRERE
REKEREREKEREREKEREREKEREREKEREREKERERDAERESERVRERERERERERERE
REERGRERERDERGRERERERKERDREQRERQREWEEREKKREERRERRDELRDDRSGRD
AQEEKKTIRKRHRVENTPSPLLSPKRGRDVSPADSEGYNSIEEKGEKRRLLSQVVRPQEP
PRSPVCLFTDDKNTCWKDEDHRCDKQDGSQHELVDSHIERGPGRGAERREEHALDGSANI
SICDPRRGKEQRDLLSASLIPSASIEDKGPVSAVHEEGKKKTKSQKKYPKKNRKEEEGAA
GGGEHGTLCSVVPETHQPLLSHCKTPKRKAIDRKRKCSGAAQSDVSEDELVTQNPVSKRQ
RGSCTPPTINKDDLLSQRPLTAGRSSLATKIDANFSDWSDDDVPERGESSSASQPSGRPP
VRILSSERPPRRGACGGGRDRIDLPIAPLLSDAPILIQSLPLQPLLPKHLLRKPQQADMQ
QHISSMSSSRASSRRLSPPFNESAHCVEGQQSMRSRRGPTQGTNLRDRDQRERDREREKD
RDRAVASDHTGGERKSRIDQLRRGEPSRSTSSDRQDSRSLSSRRSSPESERQARSRAGSY
DSRERDRDRDQLEREREKNRQLQNQTQQRDWEPESREWGGRSRDPFLRGSRELIRERDMR
ERERILPDGLLSHDRMDRDRAERDRERERILPYNLQTHREPKSRAEMKVDRGEYESREAL
INLENPSDSSNLQEAVSEKMDSLDEEEDEKGDTVSGGEEYEPISDDELDEILADSQKRDE
QQDDEKNSGHVDVIDVDWSSLIPRQKQELKAPGAALLRFTPGAVLLKAGVSRNLAGPQLL
AKVTEVCCKELEDPKDADKVLEHDLGALNMAAHNRRMERASLLRSFGYRCKALCARQDIA
IRRQLLKNDRGTTKQIYTCAPVVESELLQISVQLLKKKMSSNLTGGQKLSDSGSAPQQLS
TPAEVFIS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaagtaacagtggagaactcaaagaccatatcagacagcagc
agtagtaacagcacgaccaccccctcccgtaggcctagtgtgtttgagagactcggcccc
agcacagccagtaatgctgcagagacccattgtagaaactggttaaagactggaaactgc
agttatggcaacacatgtcggtacacacatggaactccatcacaagaaaaaggcttctct
acaaaatttaacaggtcagcagaaaggcccactggggatctccgggagaggatgaagaat
aagagacaggatgtagatgctgacactcaaaaaagagacacagacaagcccacttcccct
acaaccagacagcaagattcatcaaaaatcagacagagagaaaaaaaagaagatatcaaa
atcacaaaggagcatacaccagctagtgaggaggagacggtggattgggaagccagtcgt
gaagattctgataacggtgattacgattacgagttatcccttgagatgaagagacagaag
attcaacgtgagctgatgaagctggagcaggagaatatggacaaacgagaggatgtcatc
attaagaaagaggaagtttccaaaactagaaacagcggttctttgaaggacaaggcctct
cctaaaccctcaagttctaaggggtcacctttgtcccgtaagtccagctgctctcccaaa
cataaagctactgggaagagtgggacctcaagcaagaaagagaagtcctcaactttctca
gtcatttcttgtccagtgtctgaccagcccagggcagataagacagacggcagatcttca
aaaagcagccatagccgaaagaaagggccacggactccaagtcctcctccacctgtccat
gtggggccaccagtggctgggaagaaacacaaaaataaacacaaaaacaaggaaaaaaca
gatgaaaagcttaaagagggaaaagagagaggatgtgatctggagaaacacaaggagaaa
aaagaaaagcgcaggtgtagaaccccacctcgtcaccggtgcagcccctcccctcattcc
agacaacaacactccccctcctcacactctgggtcctcagcactgagacaatccccctcc
cctcgccgcagacagggttctgtctctcccccttaccaacaagactttccccctccctct
tcattctcaccccctcctatccagtcttcacgccactcccattctccactcacccctcat
agagaggcctccccaagccccacccctcgcaggtctagccccagctccaatcaccgctca
caggccagagagaggggtagaggagagagagaaaggagtcctgtgatccaggaaagacgc
catgagcgcaaagatgagagccgtatgaatcgtgagaaggatagctgccgtgatgaacga
gactacgagattgaacgcatttctgtacgtgatggctgtgatgccaaagacagtcgagac
cgccgtggtgaacgagatagacgtgatgcccgggatgagcgacatcaccgtggagaggtt
aaggattctagggatacatatgcaacagaaactcgagaccgctcgggacaagaatccctg
gaacatagagaaagagaacgtgacagggaaagggaaagaaaagaacctcatagaaaagag
gaaacttcccaggaggacaggagttatggaagaggacatggaaaggaagaagtaaaaatt
gagaccagagtggagatcaggaatgaatctcgaggtgaaagaacaggaagagggagggga
cgtggatcagattccctggatcagaaagggtctgctcgtggtagcagagcatcacaaggt
gacaccagtggtactcatggacatgaaagctgggagccccggagcagtttcagagataga
agttctgaaaggaacagtgaccgtgatcgatatgacaatgataggtcgcggggagaacag
gtcagagatgaccggagggtagggcatgcggagagagattgccgtgacaacagagaaaga
gaacaaagagcttctcctcgccatcaacagaaccgtggtgaagaccttgaagagaggaga
gatgacagaaggaatgatcgaggggaggaaagacgagaagaccgtatccgtgaaagagaa
agggagaaggagagagaaagggagaaggagagagaaagggagaaggagagagaaagggag
aaggagagagagagggagaaggagagagagagggaaaaagagagagaaagagatgctgaa
agagaaagtgagcgagtcagggaaagggaacgtgaaagagagagggaaagagaacgggaa
agggaggaacggggccgggaaagggagagagatgagcgggggagagaaagggaacgagag
aggaaggaaagggatagggagcagagagagaggcagagggaatgggaagaaagagagaag
aaaagggaggagaggcgagagagaagggatgagttgcgagatgatcgctctggccgagac
gctcaggaagagaagaagaccatccgtaagagacatcgtgtagagaacacgcccagtcca
ctgctatctcctaaaagaggacgagatgtgagccctgcagacagtgaaggttacaacagc
attgaagaaaaaggagaaaagcgccgcctgctaagtcaagtggttcgtcctcaggaaccc
ccccgctcacctgtctgcttgtttactgatgataagaacacttgctggaaggacgaagac
caccgttgtgataaacaagatggcagccaacacgagttggtggattcccacattgagaga
ggacctggaagaggagcagagcgtcgtgaggaacatgctctagatggttctgctaacatt
agtatctgtgaccctagaagggggaaagagcagagagacctcctttctgcttccttgatt
ccatctgcctctatagaggataaaggccctgtatctgctgttcatgaagaaggcaagaaa
aagactaaatctcaaaagaaatatccgaagaagaaccgtaaagaggaggagggagcagct
ggaggaggggaacatggaaccttatgttctgttgtacctgaaacccaccagcctcttctc
tcccactgcaagacacccaaaagaaaagccatagataggaagcgtaaatgctctggtgct
gcacagtcagatgtttctgaggatgagctggtaacccagaaccctgtcagtaagagacaa
cgtggatcatgtacacccccaacaataaacaaggatgaccttctatcccaaagaccctta
actgctggaaggagttctcttgcaacaaaaattgatgccaacttcagtgactggtctgat
gatgatgtaccagagcgaggcgagtcctcctctgcttctcaaccatctgggaggcctcca
gtgcgaatactttcatctgagcgtccccccagaagaggtgcatgtggtggtggcagagac
cgtatagatcttcccatcgctcccttgctctctgatgctccaatattaatacagtcactt
cctttacaaccattgctgccgaaacacctgctgcgcaaaccgcagcaggcagacatgcag
cagcacatcagtagtatgtcatcaagtcgagcatcatcaagaagactgtccccacctttc
aatgagtcagctcactgtgttgagggccaacagagtatgaggtctcgtagaggacccacc
cagggcaccaacctgcgtgatcgtgatcagcgagaacgtgacagagaaagagaaaaagac
agagatagggcagttgctagtgatcacacaggaggagagagaaaatcaagaattgatcag
ctgcggagaggagaacccagtcggagtacctcctcagaccgacaggattctcgtagtctt
agttcccgtcgaagttcacctgaatctgaacgtcaagctcgctctagagctggatcttat
gacagccgagaacgtgatcgagatcgtgatcagttggaacgagagcgtgagaaaaatcgt
caattgcaaaatcaaacccaacaacgagactgggaaccagaatctcgtgagtggggtggc
cggtccagagaccccttcctcaggggcagccgggagctaattagagagcgagacatgcga
gaacgggagcgaattttaccagatgggctgctgtcacatgacagaatggatcgtgatcga
gctgaaagagaccgagaacgggaaaggattctcccatataatcttcaaactcacagggaa
ccaaagagcagagctgagatgaaggtggatagaggagaatatgagtcaagggaagccctt
ataaatctagaaaacccaagtgatagctcaaatttgcaagaagcagtatctgagaaaatg
gatagccttgatgaagaagaggatgaaaagggagacactgtgtcaggtggtgaggagtac
gagccaatcagtgatgatgaacttgatgagattctggcagacagtcaaaagcgtgatgaa
cagcaagatgatgaaaaaaattctgggcatgtggatgtgattgatgtagactggtccagt
ttaatacccaggcaaaaacaagagttaaaagctcctggggcagcactgctcagattcact
ccgggggctgtgctcctcaaagcaggagtgtctagaaacttggctgggcctcaactcctt
gccaaggttacagaggtgtgctgcaaagagctggaagatcctaaagatgctgataaagtg
ttagagcatgatctgggagctctgaacatggctgcacacaacagaagaatggaaagggcc
agtctgctgaggagttttggctatcgctgcaaggcactgtgtgcgcgccaggacattgcc
atacgcagacaattgctaaaaaatgacaggggcacgaccaaacaaatctacacatgtgct
ccagttgttgaaagtgagctactgcaaatcagtgtgcaacttcttaaaaagaaaatgtct
tccaacctaactggtggtcagaagttgtctgattcaggctctgcacctcaacagctcagc
acaccagcagaggtgttcatttcctga
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integrated database retrieval system
