Paramisgurnus dabryanus (large-scale loach): 135736056
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Entry
135736056 CDS
T10799
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135736056 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135736056 (dis3)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135736056 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
135736056
NCBI-ProteinID:
XP_065110917
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All DBs
Position
4:47684761..47935458
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AA seq
950 aa
AA seq
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MLKSKTFVKKTRSGGVLKIVREHYLRDDIWCGSEVCRECKDEAPVLQEDACLKSSLCPFS
HYLIPDTNVVLHQIEILEDPLIRNVIILQTVLQEVRHRSAPVYKRIKDVIHDKEKHFYTF
TNEHHRGTFIDREQGESANDRNDRAIRVATTWYTDHLAKATHDGTLKVVMLTNDCANKEK
AEQHGLLVYKCEEYVKSLIGHPELVDRLALTSDDQNDITGSKSLFSEHLPLSRIQAGIKN
GIFLQGTFHANRDNYFEGTVSIQRDDKGITEVLLQGLQNLNRAVHQDVVAVELFPKERWA
APLSVVLQDDGPNDEDAEEDEIKNTTVSIASDSIDLKPTGQVVGIIKRNWRPFCGMLSQS
QIKEATRHLFTPADRRIPRIRIETRQAATLVGQRIMVAIDGWPKNSRYPNGHFVKSLGTA
GDKETETEVLLLEHDVPHQPFSQAVLNILPKMPWSVTEEDMKVRADLRHLCVCSVDPPGC
TDIDDALHCRELKNGNLEVGVHIADVSHFIRPGNALDQEAANRGTTVYLCGKRVDMVPEL
LSSNLCSLRANVERLAFSCIWEMNYLAEVINTRFTKSVINSKASLTYAEAQMRIDDPNMN
DDITKSLRSLNKLAKILKRQRTDKGALNLTSPEVRFHMDTETHDPIDLQTKELMETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPSPPPSKFDILIKAAKSKDIVIHTDSAKALAD
SLNNATIESFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYA
DIMVHRLLAVAINADSTYPDLMNKHRQSALCNNLNYRHTMAQYAQRASVAFHTQLFFKNK
GIINEEGFILFVRKNAIIVLITKFGFEGTVFFENKDKPYPHLSFDSESPTLTVEGHTFHM
FDKVKVTISLDAFNIQHQRIRMALIEPVIPGISVSLPETEPEAKKLKLNC
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatctaaaacgtttgtaaagaaaactcgttctggtggagtgttgaagatagtg
cgcgaacattacctacgagatgacatctggtgtggaagtgaagtttgtagggagtgcaaa
gatgaagccccagttctgcaggaggatgcatgcttaaagagcagcctgtgcccattttcc
cactacttaatcccagacaccaatgtagttttacatcagattgagatccttgaagaccct
ctgattagaaatgtcatcatccttcagacagttttacaagaggtgagacacaggagcgcc
ccagtctataaaagaatcaaggatgttattcatgacaaggaaaagcatttctacaccttt
accaatgagcatcacaggggtacctttattgatcgcgagcaaggagagagcgctaacgat
cgcaatgatcgagccattcgtgttgctactacatggtacacagaccaccttgccaaagca
acccatgatggcaccctaaaagtggttatgctgaccaatgattgtgccaacaaagaaaaa
gcagagcagcatggtttactagtgtacaaatgtgaggagtacgtcaaaagcttgattggc
caccctgagcttgtggacagactggcattaacatctgatgatcaaaatgacatcactggc
agtaagtcgctgttttcagagcacctgccattatccaggatccaggctggcattaagaat
ggtatattccttcagggcacattccatgcaaatagagacaactattttgagggtacggtc
tccatacagcgagatgacaaaggtataactgaggttctgcttcaagggcttcagaactta
aaccgggctgtgcatcaagatgtggtggctgttgaactctttccaaaggaacgctgggct
gctcccttatctgttgtactacaggatgatggtccaaatgatgaagatgctgaggaagat
gagattaagaatacgacagtgagtatagcatcagactctattgatctaaagcccactgga
caagtagtgggcattataaagcggaactggaggcctttctgtgggatgctgtctcagtca
cagatcaaagaggcaacgagacaccttttcactccagcagaccggcgaatcccacggatt
cgtattgagacccggcaagctgccacactagtgggtcagagaattatggttgccatagat
ggctggcccaaaaactctagatacccaaatggtcactttgtaaaaagcttgggtactgct
ggggataaagagacagagacagaggtgcttcttcttgagcatgatgttcctcatcagccc
ttttcccaagctgtgcttaacatcctacccaagatgccatggagcgtaactgaggaggac
atgaaagtccgagcagatctcagacacctgtgtgtgtgtagtgttgatcctcctggctgt
acagatattgatgatgctcttcattgtcgggaactgaagaatggaaacttggaggttggt
gttcacatagcagatgtcagtcattttattcgaccaggaaatgcactagaccaagaggca
gccaacagaggtaccacagtctacctttgtgggaagagagttgacatggtccctgaactg
cttagttccaacctgtgttctctccgggcaaacgttgagaggttagcattctcatgtatt
tgggagatgaactaccttgctgaagttattaacactcgcttcacaaagagtgtcatcaac
tccaaggcctcacttacatatgcggaagctcagatgaggattgatgaccccaacatgaat
gatgacataacaaagagcttgcggtctcttaacaaactggctaagatcttaaagcggcag
aggactgataaaggagcactgaacctcacttctcctgaagtgcgtttccacatggacact
gaaacccatgaccccatagatttgcagaccaaagaactaatggagactaattcaatggtg
gaggagtttatgttattagcaaatatatctgtagcacagaagatatatgatgagttctct
gagtgtgctctactgaggaaacatccttcaccaccaccatctaagtttgacatcctcatc
aaggctgctaaatcaaaggacattgtcatccacacagattcagccaaagctcttgctgat
tccctgaacaatgcaacaattgaaagtttcccatacttcaacaccttactaaggattctg
gccacccgctgcatgatgcaagctgtgtatttctgctctggcatggacagtgatttccac
cattatggcctggcctcacccatatacacacacttcacatcacccatcaggagatatgct
gatatcatggttcatcgtctgttagcggtggctattaatgcggacagcacataccctgat
ttgatgaacaaacacaggcagtcagccctatgcaacaaccttaactacaggcacacaatg
gcccagtatgcacagagagcctctgtggcattccacactcagctgtttttcaagaataag
ggaatcataaatgaagaaggattcattctatttgtaagaaaaaatgctatcatcgtcctc
attactaaatttggatttgagggcactgtgttctttgagaacaaggacaaaccttatcct
catctaagctttgactcagagagtcccacactaacagtggagggacacacctttcacatg
tttgataaagtcaaagtgactatcagccttgacgctttcaacatccagcaccagaggatc
agaatggcactcattgaaccagtgatccctgggattagtgtatctttgcccgagactgaa
ccagaggccaaaaaactcaagctgaactgctaa
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