Paramisgurnus dabryanus (large-scale loach): 135736310
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Entry
135736310 CDS
T10799
Symbol
arhgef11
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135736310 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135736310 (arhgef11)
Membrane trafficking [BR:
pdab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135736310 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
135736310
NCBI-ProteinID:
XP_065111138
LinkDB
All DBs
Position
2:16218595..16411669
Genome browser
AA seq
1430 aa
AA seq
DB search
MSFRHPTSTLDSPFAAWLSSLTLGDSECRSSFGQQRDTQSDFSSENTGTGLVQRCVVVQR
DNLGFGFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSLVSSMSHQEVVKLIKSG
TYVALTLQGPPPSTVSAPLKSLSTDLSPNHKITLEGETLAPPLPSTPPTGSSTPTQRITG
PKPLQDPEVKKHATEILRKMLEQEEAELQNLLGEQSRNPSPSIVERIESAKRRANQVRVK
IQQDVDGTRSEVITNYLMAGEGQSSMDSSEGDFEACESPFSSPSTFLWNPLHHRQGSDAN
TTDSEGKAQIIGPEEEEEDNGYMINEVDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNL
LLFYLSVEAYLSSSPKDARSLAPQICSYFLNHDAPLKIKVKEEILTDIESRFHAQEDIRG
PLSELQQQVFPDIQDQLQDYRNKQTMGLGSLFGESDLQQLDGDPVKERQVVDKQVVALWE
IISKHKEDKSSPLASAVHLYLRHSGINLGDSKVFPGLILEKEKWLPFFPKSKKQLSSAKK
EKDGEDKKRNPLLKYIAKPKSTSQSMFHVPLSPTEVHPGSVQNIIQQFENNSYSVEDGEI
EGQRLASSSFRNNSMESPTMSVRLARSESLKAQGEGRRRGDGTGVESVPRSLSDLDMEDC
EERERPGLRPLHHRVSSSASSCSARSLENPTPPYTPRSRRRSIDSPVSLLPHAPALDEDV
IDSQNWQETVEPHILTSLTSREIDRQAVIYELFTTEASHLRTLMVLDQVFFQKMQSVLSQ
EELSSIFLNLHQVYELHANLCESMKKHRESMIVQGIGDLMLARFEGEAGNQFQKQVSHLC
SQQSQALELIKNKQRKDPRFAHLIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNII
KYTEEDSPDLQLLQRALACCRGILQAVNEVVRETEHRHRLSQYQNRLDLTHLERQANPVA
TQFKNLDLTTKRMIHEGHLTWKVSKDKAIEIQALLLSDLLVLLQRGPDDRLILRCPSRLL
AGGGSTDLKTVCPVVRLDSSLVRSVATDNKALYVISTSERQIYELVAGTSSEKNTWKDLL
EKTIALATQGANTTKQSSPAQSSAVCTSSSRLDLSLSEKSVSLEQHSAGYDECALTPIKP
TEESEACHDENGESYLHTKAGVAEAALQDVKILRQLIFRDLEDGWSQDSDDTPTNEGSFA
DRPRPDISDPNLRESPNKWVEEHVDAYSLEVVQPAIRIVRKVVGVGCSIPDDITDDVTSN
QSSKEKGNMFYLVMPKDQAGAFTDESSTDEIKDSDISENHQNQNMFSTSLLEEEQETSID
LSPTDQSLPESLGQREGLDQPQVSNQQHVIKNVDEIFHTVEELMRKLNHLKDIEADHYNL
LKKLRKPLSVDEASSDKSPAAVKPLDHGAGDGKVGISTEGAQAVIQSTGF
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcgacatccaacctcaactctggacagtccatttgctgcttggttaagcagt
ttgacattgggggattctgaatgccggtcttcctttggccagcaaagagatacacagtca
gatttttcctcagaaaacacagggacaggcttagtccaaagatgtgtggttgttcaacgg
gacaatctggggtttggcttcactgtgtgtggggagaggatcaaactagtgcagaatgtt
cgaccaggtggagcagccgtcaaggctggagttcaggaaggggacagaattattaaggtt
aatggctccttagtttcatccatgtctcatcaggaagtggtaaaattgatcaaatctggg
acatatgtggccttgactctgcagggccctcctccttcaactgtgtctgctcccctcaag
tccttatctaccgacctctcgcctaaccacaagataacattggaaggtgaaaccttggca
cccccacttccttcaacgccacctacaggaagcagtacccccacccaaagaatcacagga
cctaaaccattacaggaccctgaggtaaaaaaacatgcaacagaaatcctcagaaagatg
ttagagcaagaggaggcagaactgcagaacctgttgggggaacaatctcgaaacccctcc
ccttccatagtggagcgaatagaaagtgccaaacgaagagctaatcaagtcagagtaaag
attcagcaggacgtggatggaacacgttcagaagttattaccaactatctcatggctggt
gaaggtcagtcatcaatggactccagtgaaggagactttgaggcatgtgagagtcccttc
tcctccccctccacctttctctggaatcctctgcaccacagacaggggtctgacgcaaac
acaactgactcggaaggaaaggcccagatcattggaccagaggaagaagaggaggataat
gggtacatgataaatgaggttgatggcccattccaggacatagaactgctaaaaagtcgt
ccggcacacatgactgtgtttatgagatatgtgttcagtcaacttctggatcccaaccta
ctgctgttttacttgtctgtggaggcatatctgagttcgagtccaaaagacgcccgctca
cttgcccctcagatctgctcctatttcctaaaccatgatgctcctttgaagattaaagtc
aaagaagagatcctgacagatatagagagtcgtttccatgcacaggaggacattcgaggg
cctctctctgaattgcaacaacaggtgtttccagatattcaagaccagcttcaagactac
aggaataagcagacaatgggcttgggatctctatttggagagagtgacctacaacagtta
gatggagaccctgtgaaagagagacaggtggtggataaacaggttgttgcactttgggaa
atcatatcaaaacataaagaagataaaagttcccctttagcatctgctgttcacttgtat
ctcagacactctggcattaatctgggagactctaaagtttttcctggtttaatcttggag
aaggagaagtggcttccattctttccaaaaagtaaaaagcagctgagcagcgcaaaaaaa
gaaaaggatggagaagataagaaaagaaatcctttattgaaatacattgcgaagcctaag
agtacatctcagtcgatgttccatgttccattgtcccccactgaagttcatccaggaagt
gtgcaaaatattattcagcagtttgagaataattcctattctgttgaagacggcgaaatt
gagggacagaggttggcctccagcagctttcggaataacagcatggaaagtccaaccatg
tcggtgcgtttggctcgtagcgagtcgttaaaagctcagggggagggccggcgacgagga
gatggaacaggggtagaatctgttcctcgttccttaagtgatttagatatggaggactgt
gaggaaagggagaggccaggcctgaggccgttacatcacagggtctcgtcatcagcatcc
agctgttcagcacgatccttggagaatccaacaccaccttacacccctcgctcccgccgc
aggagcatagactctccagtgtctctgttaccccatgctcctgccctagatgaggacgtg
atcgattctcagaactggcaagagacggtggagccacacatactgacctctctcacttca
cgtgaaatcgacagacaagctgtcatatacgagctgtttactactgaggcgtctcatttg
cggacccttatggttttagatcaggtgttcttccagaagatgcagagcgttctcagtcaa
gaggagctctccagtatcttcctgaacctgcatcaggtctatgaactacacgcaaactta
tgtgagtctatgaagaaacacagggaatcaatgatcgttcagggaatcggggacctcatg
ctggcaagatttgagggggaggcagggaatcagtttcagaagcaggtgtctcatttgtgc
agtcagcagagtcaagcactggaattgatcaaaaataaacagcgtaaagacccccgattc
gcccacctaatacaggagtgcgaggccagtccacactgccgtaggttacagttaaaagat
cttctggtgtctgaaatgcagagattgactaaatatccactgctactggataacattatc
aaatacacagaggaggattcacctgacctgcagctgctgcagagagcactggcctgttgc
cgcgggatactacaggctgtcaatgaggtcgtcagagagacagagcacaggcaccgtctc
agccaataccagaacaggctggatctcacgcatctggaaagacaggcaaatcctgttgca
acacaatttaagaatctggacctcaccactaagagaatgatccatgagggtcatctcaca
tggaaagtcagcaaggacaaagcaatcgagatccaggcattgttactctcagatctcttg
gtgctgcttcaaagaggtccagatgaccgtcttatactgaggtgtccttcacgattgctg
gccgggggtggttctacagacctcaaaactgtctgccctgtcgttcgtcttgactcctcc
cttgttcgatcggtcgcaacagacaataaagctctctatgtaataagcacatcggagaga
cagatctatgagctggtggccgggacatcctcagagaaaaacacttggaaagacttgctc
gaaaagacaatcgctttagccactcaaggggcaaacacaaccaaacagagttctccagca
caatcttcagctgtgtgtacatcttccagtcgattagatctttcactgtcggagaagtct
gtgtctctagaacaacactcggctggttatgatgaatgtgctctcacacccatcaaacca
actgaagagtctgaggcctgccatgatgagaatggggagagttacctgcacacaaaagcc
ggtgttgcagaagctgctcttcaggatgtgaaaatcctccgacagctcatcttcagggat
cttgaggatgggtggagtcaggattcagatgacacgcccacaaatgaaggttcttttgca
gacaggccgaggccagatatttctgaccctaaccttagagagagcccaaacaaatgggta
gaggagcatgtagatgcttactcgttagaggtggtacaacctgctattcggattgtaagg
aaagttgtgggtgtgggctgttctattcctgatgacatcaccgatgatgttacctccaac
caatcctctaaggaaaaagggaacatgttttatctggtaatgcccaaagaccaagctggt
gctttcacagatgaaagcagcacagatgaaatcaaagactctgacatatcggagaaccat
cagaatcaaaacatgttctcaacgtcacttttggaagaagaacaagagacttcaatagac
ctctctccaacagatcagtcactgcctgagagcctaggtcaaagagaagggcttgaccag
ccacaggttagcaaccagcagcatgtaatcaagaatgtggacgagatcttccacacagtt
gaggagctcatgagaaaattaaaccatcttaaggatattgaagcagaccattacaatctt
ctgaagaaattaagaaaaccactctctgtggatgaagcgtcaagtgacaagtctcctgca
gcagtcaaaccactagaccatggagctggtgatggtaaagtaggcatctcaacagaagga
gctcaggcagtaatccagtctactggcttctga
DBGET
integrated database retrieval system
