Paramisgurnus dabryanus (large-scale loach): 135737640
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Entry
135737640 CDS
T10799
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03440
Homologous recombination
pdab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135737640 (top3a)
03460 Fanconi anemia pathway
135737640 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdab03032
]
135737640 (top3a)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135737640 (top3a)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
135737640 (top3a)
DNA replication proteins [BR:
pdab03032
]
Eukaryotic type
DNA Topoisomerases
135737640 (top3a)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
135737640 (top3a)
FA (Fanconi anemia) pathway
135737640 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
135737640
NCBI-ProteinID:
XP_065111510
LinkDB
All DBs
Position
3:complement(33533794..33543905)
Genome browser
AA seq
1006 aa
AA seq
DB search
MNFLHRLLFRLTVRGGFRRQISVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRRE
GFSVYNKIYEYEYNLFGQNVSVSMTSVSGHLLALEFKAPFQKWHSCNPVLLFDAEVEKYC
PENFVPIKRTLEREVKQCQALVIWTDCDREGENIGFEVIDVCKAVKPNIQVFRARFSEIT
PNSIRRACETLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYG
SCQFPTLGFVVERFKAIQAFVPETFFRIKVVHEPNEEESVEFSWKRHRLFNHTACLVLYQ
MCMENPIAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKDTMKMAEKLYTQGFIS
YPRTETNMFPQNLNLTPLVEQQTQDYEWGNFAQRILDSGGPTPRNGNKSDQAHPPIHPTK
YTNTLQGNEKRLYEFIVRHFLACCSKDAQGQEVIVEIEIAEERFSASGLTIIARNYLEVY
PYDKWYNKVIPLYTPDTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEH
IETIKSRTYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEFTEQEQDQLEIPLPVRKCPQC
NRDMVLKKKKDSTGMFLSCMGYPACKAAVWFPDTVLEVSRDESVCQTCRPHPVHMLKFKF
KRGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRGGEGAQISRTNNNSTSRQPHVQRTNS
APPSRLENVRPPASRPRTDTNRPPASLPPPQPPASAQGGAIVCNCGLDAVLLTVRKDGPN
QGRQFYKCNTGDCKFFLWADQPAEQGVPGGSRGPLSQTSQPPRPSVGFGNIPQQRQNNRG
SGSNEGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPREQQCGFFQWVNENVAPASVFP
EGNNGRHGGNKKTTAASTKPPAAKRQRTCGLCHEPGHTRVTCPQGR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaactttttacacaggttgctcttcagattgacagttcgcggtggatttcgcaggcaa
atatctgtaagcatgataagacgaactcaaattaagaaagtgctttgcgttgctgagaaa
aacgatgcggcaaaagggatagcagagattatgtcaaatggcagatcaagaagaagagaa
ggattttctgtctacaacaaaatatacgagtacgaatacaatctgtttggccaaaatgta
tctgtaagcatgacatcagtgtcagggcatctcttggctcttgaattcaaagcccccttt
cagaaatggcatagttgtaatcccgtcttgctgtttgacgctgaggtggaaaagtattgc
cctgagaactttgtaccgatcaagaggactttggagcgagaggtcaaacaatgccaagct
ttagtcatttggacagattgtgatagagaaggagagaatattggctttgaggttattgat
gtttgcaaagcagtgaaaccaaacattcaggttttccgtgcacgattctctgagatcact
ccgaactccataaggagagcttgtgagacacttactgaaccagatattaacgtcagtgat
gcagtggatgtgagacaagagcttgacctacgcatcggggcttcgtttaccaggttccag
acgttgcgattacagaaaatatttccagaatctctctcggatcaactcatcagttatgga
agttgtcagtttcctactctcggctttgttgtggagcgctttaaagccattcaagccttt
gtccctgaaacatttttcagaatcaaagttgttcatgaacctaatgaagaggaatctgtg
gaattcagctggaagagacatcgactttttaatcacacagcatgccttgtgctgtatcag
atgtgcatggagaatcccatagcgaaagtgatatctgtgacaagtaaaccaaaaagtaaa
tggcgacctttaccccttgacacagtggaacttgaaaaactagcttcaagaaaattaaga
atcagcgcaaaagacaccatgaaaatggcagaaaagctgtacactcaagggtttatcagt
tatcctcgaacggagaccaacatgtttccacagaacctgaatcttactccacttgttgaa
cagcagacacaagattatgaatggggaaatttcgctcagcgcattttggacagcggtggg
cccacacctcgaaatggaaacaaatccgatcaggcccatccccccattcaccccaccaaa
tacaccaatactttacagggaaatgagaaacgattgtatgagttcatcgtgcgtcacttc
ctggcctgttgctccaaagatgctcagggtcaagaggtgattgttgaaatcgaaatagct
gaagagagattctcggctagtggactcaccatcattgcacgaaattatctggaggtttat
ccctatgacaagtggtacaacaaggttattcctttatatacacctgatacaacatttcag
cccaccgcaattgagatggtggaaggacagacgagtcctccacagcttctgacagaggcg
gatttgatttctctcatggaaaagcatggcattggtactgatgcaacacatgctgagcac
attgagaccataaagagccgcacgtatgtcggactgacagctgaccagaggttccttcct
ggagaactcggcatgggtctcgtcgaagggtacaactctatgggatatgagatgtctaag
ccagacttgagagcagaactggaggcagatcttaaactcgtctcagagggccggaaggac
aaagcttctgtcctcagttatcacgtggcaaaatacaaggctgtttttatcgaatctgtg
agaaaggcaaagaaattggatgaagctctctccaattacttgggtccggctcaagagttt
acagaacaggaacaagaccagttggagataccgttaccagtgcgaaagtgtcctcagtgt
aaccgtgacatggtgttgaagaaaaaaaaggacagcactggaatgtttctttcgtgtatg
ggctatcctgcatgtaaagcggccgtgtggtttccagacacagtattggaagtcagcaga
gacgaaagtgtctgtcaaacgtgccgtccacatcctgtacatatgctaaagtttaaattc
aagaggggaagtctgccacccatgatgccccttgaatttgtgggatgtatcggaggatgc
gatgagactctgagagaggtcttaaatttaaagtatctcagagggggagaaggagctcag
atctctcgaaccaacaacaactcgacctcccgtcagcctcatgtacagagaaccaactcg
gcacctccatccagattggaaaatgttagacctccagcatccagacccagaactgacacc
aacaggccaccagccagtctgccacctccgcaacccccagcctcagctcagggtggtgct
atcgtgtgtaactgtggcttggacgcagttcttctcaccgttcgcaaagatggtcccaat
caaggtcgacagttttacaagtgtaacacaggggattgtaagttctttctatgggctgat
caacccgccgagcagggagtgcccggaggaagcagagggcctttaagtcagacttcacaa
cctcccaggccctcagtgggctttggaaacatacctcaacaaagacaaaacaacagagga
tctggaagcaatgaaggtgaaactatgtgtaactgtaatgaacctgctgttaccaggact
gtcatgaaggatggtccaaacaagggccgaatgtttcacacctgtggaaaaccacgtgaa
cagcagtgtgggttcttccagtgggtaaacgaaaatgttgcaccagcctcagtttttcct
gaaggaaataatggtagacatggtgggaacaaaaagaccaccgctgcctcaaccaaacct
cctgctgccaaacgtcagagaacctgtggtctctgtcatgaaccgggtcacactcgggtc
acctgtcctcagggtcggtga
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