Paramisgurnus dabryanus (large-scale loach): 135737640
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Entry
135737640 CDS
T10799
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03440
Homologous recombination
pdab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135737640 (top3a)
03460 Fanconi anemia pathway
135737640 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdab03032
]
135737640 (top3a)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135737640 (top3a)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
135737640 (top3a)
DNA replication proteins [BR:
pdab03032
]
Eukaryotic type
DNA Topoisomerases
135737640 (top3a)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
135737640 (top3a)
FA (Fanconi anemia) pathway
135737640 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
135737640
NCBI-ProteinID:
XP_065111510
LinkDB
All DBs
Position
3:complement(33533794..33543905)
Genome browser
AA seq
1006 aa
AA seq
DB search
MNFLHRLLFRLTVRGGFRRQISVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRRE
GFSVYNKIYEYEYNLFGQNVSVSMTSVSGHLLALEFKAPFQKWHSCNPVLLFDAEVEKYC
PENFVPIKRTLEREVKQCQALVIWTDCDREGENIGFEVIDVCKAVKPNIQVFRARFSEIT
PNSIRRACETLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPESLSDQLISYG
SCQFPTLGFVVERFKAIQAFVPETFFRIKVVHEPNEEESVEFSWKRHRLFNHTACLVLYQ
MCMENPIAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKDTMKMAEKLYTQGFIS
YPRTETNMFPQNLNLTPLVEQQTQDYEWGNFAQRILDSGGPTPRNGNKSDQAHPPIHPTK
YTNTLQGNEKRLYEFIVRHFLACCSKDAQGQEVIVEIEIAEERFSASGLTIIARNYLEVY
PYDKWYNKVIPLYTPDTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEH
IETIKSRTYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEFTEQEQDQLEIPLPVRKCPQC
NRDMVLKKKKDSTGMFLSCMGYPACKAAVWFPDTVLEVSRDESVCQTCRPHPVHMLKFKF
KRGSLPPMMPLEFVGCIGGCDETLREVLNLKYLRGGEGAQISRTNNNSTSRQPHVQRTNS
APPSRLENVRPPASRPRTDTNRPPASLPPPQPPASAQGGAIVCNCGLDAVLLTVRKDGPN
QGRQFYKCNTGDCKFFLWADQPAEQGVPGGSRGPLSQTSQPPRPSVGFGNIPQQRQNNRG
SGSNEGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPREQQCGFFQWVNENVAPASVFP
EGNNGRHGGNKKTTAASTKPPAAKRQRTCGLCHEPGHTRVTCPQGR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaactttttacacaggttgctcttcagattgacagttcgcggtggatttcgcaggcaa
atatctgtaagcatgataagacgaactcaaattaagaaagtgctttgcgttgctgagaaa
aacgatgcggcaaaagggatagcagagattatgtcaaatggcagatcaagaagaagagaa
ggattttctgtctacaacaaaatatacgagtacgaatacaatctgtttggccaaaatgta
tctgtaagcatgacatcagtgtcagggcatctcttggctcttgaattcaaagcccccttt
cagaaatggcatagttgtaatcccgtcttgctgtttgacgctgaggtggaaaagtattgc
cctgagaactttgtaccgatcaagaggactttggagcgagaggtcaaacaatgccaagct
ttagtcatttggacagattgtgatagagaaggagagaatattggctttgaggttattgat
gtttgcaaagcagtgaaaccaaacattcaggttttccgtgcacgattctctgagatcact
ccgaactccataaggagagcttgtgagacacttactgaaccagatattaacgtcagtgat
gcagtggatgtgagacaagagcttgacctacgcatcggggcttcgtttaccaggttccag
acgttgcgattacagaaaatatttccagaatctctctcggatcaactcatcagttatgga
agttgtcagtttcctactctcggctttgttgtggagcgctttaaagccattcaagccttt
gtccctgaaacatttttcagaatcaaagttgttcatgaacctaatgaagaggaatctgtg
gaattcagctggaagagacatcgactttttaatcacacagcatgccttgtgctgtatcag
atgtgcatggagaatcccatagcgaaagtgatatctgtgacaagtaaaccaaaaagtaaa
tggcgacctttaccccttgacacagtggaacttgaaaaactagcttcaagaaaattaaga
atcagcgcaaaagacaccatgaaaatggcagaaaagctgtacactcaagggtttatcagt
tatcctcgaacggagaccaacatgtttccacagaacctgaatcttactccacttgttgaa
cagcagacacaagattatgaatggggaaatttcgctcagcgcattttggacagcggtggg
cccacacctcgaaatggaaacaaatccgatcaggcccatccccccattcaccccaccaaa
tacaccaatactttacagggaaatgagaaacgattgtatgagttcatcgtgcgtcacttc
ctggcctgttgctccaaagatgctcagggtcaagaggtgattgttgaaatcgaaatagct
gaagagagattctcggctagtggactcaccatcattgcacgaaattatctggaggtttat
ccctatgacaagtggtacaacaaggttattcctttatatacacctgatacaacatttcag
cccaccgcaattgagatggtggaaggacagacgagtcctccacagcttctgacagaggcg
gatttgatttctctcatggaaaagcatggcattggtactgatgcaacacatgctgagcac
attgagaccataaagagccgcacgtatgtcggactgacagctgaccagaggttccttcct
ggagaactcggcatgggtctcgtcgaagggtacaactctatgggatatgagatgtctaag
ccagacttgagagcagaactggaggcagatcttaaactcgtctcagagggccggaaggac
aaagcttctgtcctcagttatcacgtggcaaaatacaaggctgtttttatcgaatctgtg
agaaaggcaaagaaattggatgaagctctctccaattacttgggtccggctcaagagttt
acagaacaggaacaagaccagttggagataccgttaccagtgcgaaagtgtcctcagtgt
aaccgtgacatggtgttgaagaaaaaaaaggacagcactggaatgtttctttcgtgtatg
ggctatcctgcatgtaaagcggccgtgtggtttccagacacagtattggaagtcagcaga
gacgaaagtgtctgtcaaacgtgccgtccacatcctgtacatatgctaaagtttaaattc
aagaggggaagtctgccacccatgatgccccttgaatttgtgggatgtatcggaggatgc
gatgagactctgagagaggtcttaaatttaaagtatctcagagggggagaaggagctcag
atctctcgaaccaacaacaactcgacctcccgtcagcctcatgtacagagaaccaactcg
gcacctccatccagattggaaaatgttagacctccagcatccagacccagaactgacacc
aacaggccaccagccagtctgccacctccgcaacccccagcctcagctcagggtggtgct
atcgtgtgtaactgtggcttggacgcagttcttctcaccgttcgcaaagatggtcccaat
caaggtcgacagttttacaagtgtaacacaggggattgtaagttctttctatgggctgat
caacccgccgagcagggagtgcccggaggaagcagagggcctttaagtcagacttcacaa
cctcccaggccctcagtgggctttggaaacatacctcaacaaagacaaaacaacagagga
tctggaagcaatgaaggtgaaactatgtgtaactgtaatgaacctgctgttaccaggact
gtcatgaaggatggtccaaacaagggccgaatgtttcacacctgtggaaaaccacgtgaa
cagcagtgtgggttcttccagtgggtaaacgaaaatgttgcaccagcctcagtttttcct
gaaggaaataatggtagacatggtgggaacaaaaagaccaccgctgcctcaaccaaacct
cctgctgccaaacgtcagagaacctgtggtctctgtcatgaaccgggtcacactcgggtc
acctgtcctcagggtcggtga
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