Paramisgurnus dabryanus (large-scale loach): 135737731
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Entry
135737731 CDS
T10799
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135737731
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135737731
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135737731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IP5PC_F
WD40_like
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_EIPR1
Beta-prop_Nup120_160
zf-C3HC4_3
zf-TRAF
zf-RING_5
WD40_MABP1-WDR62_1st
DUF1664
EzrA
DUF16
Filament
WDR90_beta-prop_4th
DUF4164
DUF641
U-box
KxDL
Motif
Other DBs
NCBI-GeneID:
135737731
NCBI-ProteinID:
XP_073670099
LinkDB
All DBs
Position
3:31143873..31161557
Genome browser
AA seq
675 aa
AA seq
DB search
MSCSKPTXLDRFSGESVAGATITVPELSSDIGKQTTMETGFGATFPAVPQVAKADTNYKQ
HRRTPSSSSTLTYSPRDDDDGMPPISTPRRSDSAISIRSLHSESNMSLRSTFSLHEEEED
TEPQVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSEKCPVDNSKLTVVVNNI
AVAEQIGELFIHCKYGCRPAASGKLGAFEVDPLGCPFTIKLSTRKEHEVSCDYRPVRCPN
NPNCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEVCKFEGLKEFLQQTD
DRFHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEKNLELKFDVLDENQSKLSEDLMEFR
RDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGS
SDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTI
RAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYS
GSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTL
TGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGR
LFSGAVDSTVKVWTC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtagtaaaccaacanncttagatcgattctccggagaatctgtggcaggagcc
accatcactgtacctgaactatcatctgacataggcaaacagaccacaatggaaactggc
tttggagctacatttccagcagtccctcaagtagcaaaagcagatactaattacaaacag
caccgcaggaccccatcatcttccagcactctgacctactctcctcgtgatgatgatgat
ggcatgccacccatcagtacccctcgccgctcagactctgccatctctattcgctccctg
cactccgagtcaaacatgtcactgcgctccaccttctccctccacgaggaagaggaagac
acagagccacaggtgtttgcagaacagccctcagtcaagctttgttgccagctgtgctgt
agcgtgttcaaggaccccgtcatcaccacctgtggccacactttttgcaggcgatgtgcc
ttgacctcagagaaatgcccggtggataattccaagctcacagtggttgtgaataacata
gcagtggctgaacaaatcggtgagctcttcattcactgcaagtacggctgtcggcctgct
gcctcaggcaagctcggtgcctttgaggtcgacccacttggatgtcctttcaccatcaag
ctcagcactaggaaggagcatgaagtaagctgtgactacagacctgtgcgctgccccaac
aatcccaactgccctccattgctcaccatgaacctggaggcccatctgaaagagtgtgaa
cacattaagtgccctcattccaaatatggttgcaccttcattggtaatcaggacacatat
gagactcatctggaggtgtgtaagttcgaggggctgaaggagtttctgcagcagacggat
gaccgttttcatgagatgcaggtgacgctggcgcagaaggatcaggacatttcgttcttg
cgctctatgctgggcaaactctctgagaaactagaccagctggagaaaaacttggagctc
aagtttgatgtactggatgagaatcagagcaagctcagtgaagatttgatggagttcaga
agagatgcttctatgctcaatgatgaactgtcccacatcaatgccagactcaatatgggt
atactaggctcctatgaccctcagcagatcttcaaatgcaagggtacctttgtgggccac
cagggtccagtatggtgtctctgtgtgtattctactggtgatcttctttttagtggatcc
tcagataagtccatcaaggtctgggacacatgcaccacatacaagtgccagaagaccctt
gagggccatgacggcattgtgttggcattgtgcattcaggggaacaaattatacagcggc
tcggccgattgcacgatcattgtttgggacatccagaccctgcagaaagtgaacaccatc
cgagcgcacgacaacccggtgtgcactcttgtgtcctcgcacaacatgctcttcagtggc
tcccttaaagccattaaggtgtgggatattgttggcacggagctgaagctaaagaaagaa
ctgactggattgaatcattgggttcgagctctggtcgcttctcagaatcatctgtacagc
ggatcctatcaaactataaagatctgggacatccgctctctggagtgcgtccatgtgctt
cagacttctggaggcagcgtttactccattgcagtcaccaaccaccatatagtttgtggc
acctatgagaaccttattcatgtttgggacattgagtctaaagaacaagtgcggacactg
acgggccatgtgggtacagtatacgcactggcggtcatctccactccggatcagaccaaa
gtcttcagcgcctcctacgatcgatcgctcagggtgtggagcatggacaacatgatctgc
acccagactcttctgcggcaccagggcagtgtgacggcactcgccgtgtccagaggaaga
ctcttctctggagctgtagacagcacagtaaaggtgtggacatgctaa
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