Paramisgurnus dabryanus (large-scale loach): 135738025
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Entry
135738025 CDS
T10799
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135738025 (taf1b)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
135738025 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
135738025
NCBI-ProteinID:
XP_065111946
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All DBs
Position
12:16440192..16452340
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AA seq
625 aa
AA seq
DB search
MNEHLADGYSEPCAQCAAVDWGVTDEGQFFCRNCHNIIERTREVVDDSTFLRGHSRISQL
ARTKKTGKEGARQWMVCEGFQFILKSQADALVSLGVCSQFKTEVMWNFWKRYLQNTGQAF
TKNPVSTVRFSIDVTSESEPESIAQSEQSVRSFASSRTGDISASGISSEGELSVCSGSTD
ASMYVSAKERKSYNLMNMPRTLAICYLALLWVREAITLADLLRLASERRVPYLNVHEDFP
EELRLFGRDANIFRVESLPSYSKVRREAVNLAQVMKLPAFPTVCQDCLLHPIPLTVRYLL
ESNLPDGLFVWVHKVIKQAAMGDESFLTFDPDSKRPVLICYDIQAVAIIIVTLKLLFKLD
DRQEWTLPEEAADKKTKKKVFSFERWFKIMQPAFKRIRQKREREEARKQWKSSKPLISDL
KNKSVVLKKRRVVEHLQHRFQMLNDSTSKQQSSTATSFSGFQFHWGKDEGSDGSSMHHHR
LDCTFKKHGVNRLANRKYWHTYLGPCPSDISKDHFSDIESSLPRIYVWLIDLFSFLLGVR
QAQVYDEVLVVERRLLRKTNRPNPPRKKSKNLGPVLLTLLTKVQQSNEEKVIGEKEQGGR
AREIGTKSLCGAVGVSLALFLNQTS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacatcttgctgatggatacagtgagccatgtgctcaatgtgctgctgttgac
tggggggtgacagatgagggacagttcttctgcagaaactgtcacaatattatcgagaga
acaagagaagtggtggatgattccacctttctccgcggtcacagcaggatctcacagtta
gcaagaaccaagaagaccggaaaggagggtgcacgacagtggatggtatgtgagggattt
cagttcattttgaaatctcaagctgatgctttggttagtcttggtgtttgttcgcagttt
aagacagaggtaatgtggaatttctggaagcgatacttgcagaacaccgggcaagctttc
accaaaaatccagtttccactgtcaggttttcaattgatgtcacctcagagagtgagcca
gagtctatcgcccaaagtgagcagtcagtccgcagttttgcttcttcaaggacaggagac
atttcagcatccggcatctccagtgaaggagagttatcagtatgttcaggctctacggat
gcttcaatgtatgttagtgcgaaggaaaggaaaagctataatcttatgaacatgccacgg
acgcttgccatctgctatttggctctgctttgggtccgagaagccatcactctggctgat
ttactgaggctggcctcagagagacgtgttccttacttaaacgttcatgaggattttcct
gaagagttgagactgttcggaagagatgccaacatctttcgagtcgagtccctcccttcc
tactcgaaggtccgtagagaagcggtcaatctggctcaggtcatgaaattgcctgccttc
ccaactgtttgtcaagattgccttctccacccaattccactcactgtccgctatctgctg
gagtctaaccttcctgatggcctttttgtttgggtccacaaggttataaagcaggctgct
atgggtgatgagtccttcctgacctttgaccctgacagcaagaggcctgttctcatatgt
tatgatattcaggcagtagctatcatcattgtcaccttgaagctccttttcaagttggat
gatcgacaggagtggactttacctgaggaagcagccgataagaagaccaagaaaaaagtg
ttcagttttgaaaggtggtttaaaataatgcagcccgcatttaagcgaatcagacaaaag
agggaacgagaagaagcccgaaaacagtggaaatccagcaaacctttaatttctgacttg
aaaaacaagagtgtggtcctcaaaaagagacgggtggttgaacatttgcagcacagattt
cagatgttgaatgactccacttcaaaacaacaatcttccaccgcaacctctttctcaggc
tttcaattccattggggaaaagatgaaggttcggatggatccagtatgcatcaccatcgc
ttagactgtacctttaagaaacatggggtcaaccggcttgctaaccggaaatactggcat
acatacctgggcccctgcccatcagacatttctaaggatcatttctcagacattgagagc
agtttgcccaggatttacgtgtggcttattgatctcttctcatttctgctgggagtcaga
caagcacaagtgtatgatgaggtcctggttgtggaacgtcgcttattaaggaaaacaaac
cgccctaacccgcctcgcaaaaaatcaaaaaatcttgggccagtacttttaactttgttg
actaaagtacagcagagcaatgaagagaaagtaataggagagaaggagcaagggggcagg
gcaagagaaattgggacaaagagcttgtgtggtgctgtgggtgtttctctggcactgttc
cttaaccaaaccagctga
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