Paramisgurnus dabryanus (large-scale loach): 135738106
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Entry
135738106 CDS
T10799
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03320
PPAR signaling pathway
pdab04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
135738106 (rxrgb)
03320 PPAR signaling pathway
135738106 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135738106 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pdab03310
]
135738106 (rxrgb)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
135738106 (rxrgb)
Nuclear receptors [BR:
pdab03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
135738106 (rxrgb)
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135738106
NCBI-ProteinID:
XP_065112077
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All DBs
Position
12:complement(13787653..13806924)
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AA seq
461 aa
AA seq
DB search
MWDPAALPPHGRETGHYSQHTSTLHSPHSQPLPMSSMVGHPSVISSSRPLHSPMSTLGSS
MNGLGSPYSVITASLGSPSVSLPSTPTMSFNTIGSPQINSLNMNSSEDIKPPPGLTPVGN
MSSYQCSSPGSMSKHLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECL
IDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKEKSDNEVESTSSFNEEMPVDKILDA
ELAVEPKTEAYTESSPGNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILL
RAGWNELLIASFSHRSITVKDGILLGTGLHVHKSSAHSAGVGSIFNRVLTELVSKMKDMQ
MDKTELGCLRAIVLFNPDAKGLSNPAEVEALREKVYASLETYTKQNYPDQPGRFAKLLLR
LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatccagcggcgttgcctccacacggcagagagacaggccactatagccaacac
actagtactctgcattccccccattctcagccccttccaatgagctccatggtgggtcat
ccgtccgtcatcagttcttcccgtcccctgcactctcccatgagcaccctgggctcctct
atgaatggcctgggctcaccatattctgtcatcaccgcgtctctcggctcaccgtctgtt
tctttgccctccacacccactatgagctttaacactattggcagcccacagataaattcg
ttgaatatgaacagctcagaagacataaagcctccaccaggattgactcctgtgggcaac
atgagcagctaccaatgcagtagccctggatccatgtccaaacacttgtgtgccatttgt
ggggaccgttcttcagggaagcattatggcgtttacagttgtgaaggttgcaaaggcttt
tttaaaaggaccatcagaaaagacctgacctacacgtgtcgagacagcaaagagtgcctg
atcgacaaacgtcagcgcaatcgctgccagtattgccgttaccagaagtgcctagctatg
ggcatgaagagggaagcggtgcaggaagaaaggcagcgtggaaaggaaaaaagtgataat
gaggtggaatcaacgagcagctttaatgaagaaatgcctgtggataagattctggatgca
gaacttgcagtggaacccaagacggaggcatacacagagagcagtcctggaaactcgact
aatgacccggtcactaatatctgccacgcagctgacaagcagcttttcactttggtggag
tgggccaagagaatacctcacttctctgatctgcccctggacgatcaagtcattttgctt
cgagcaggatggaatgagctcctcatcgcttcgttctcacatcgctcaatcacagttaaa
gatggtatcttactgggcacaggactgcatgttcacaagagcagtgctcacagtgcagga
gtggggtccatttttaacagggtgctgactgagcttgtgtctaaaatgaaggacatgcag
atggacaagacagagctaggctgcctcagagccattgttctctttaaccccgatgccaaa
ggtttgtccaacccagcggaagtagaagcactgagggaaaaggtttacgcttcactagag
acctacaccaaacagaattaccctgaccagcctggcaggtttgctaaactgttgttgcgc
ctccctgccctccgatccatcggtctcaaatgcttggagcacctattttttttcaagctg
attggagacacacccatagacactttcctaatggaaatgcttgaagcaccccaccagatc
acgtga
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