Paramisgurnus dabryanus (large-scale loach): 135738495
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Entry
135738495 CDS
T10799
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135738495 (prpf39)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135738495 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
Baculo_PP31
BUD22
Motif
Other DBs
NCBI-GeneID:
135738495
NCBI-ProteinID:
XP_065112651
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All DBs
Position
12:9380584..9388810
Genome browser
AA seq
743 aa
AA seq
DB search
MEDSGAQMTGILDTDAPAVEAAGSECATDPTAADWTAGQVPPANQESHEYESVQQQLYSM
EHIKSEAENIHQADPTINDPGQVIPQPPESNGQDTTQSSEPDAVKEEAGDSESPTNMELE
DAPKEEGAEEAIGAASEQEPGLPSEYDRLWKAVEDNPEDFNGWVYLLQYVEQENHLLASR
KAFDAFFLHYPYCYGYWKKYADIEKKHGFIQMADEVYRRGLQAIPLSVDLWLHYITFLRE
NQDTSDGEAENRIRASYEHAVLACGTDFRSDRLWEAYINWETEQNRLANVTAVYDRILCI
PTQLYSQHFQKFKDHVQNNNPKHFLSEEEFVQLRVELANANRPNGEDAPGEELPPGTDDL
PDPAKRVTEIENMRHKVIETRQEIFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNW
REYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSTEGVRHIYKKACSIH
LPKKPTVHLLWAAFEEQQGNIDEARGILKAIEEAVPGLAMVRLRRVSLERRHGNMDEVEA
LLRDAITNGRNGSESSFYSVKLARQMLKVQKNIAKAKKVLLEAVEKDETNPKLYLNLLEL
EYSGDVQQNEAEIIACFDRALGSSMSLESRVTFSQRKIEFLEDFGSDINVLVAAYEEHQR
LEKESESLKRKAENGSQESDSKRQRTDDQSAASGQMMQDMQANSAGYNYNNWYQQYNSWG
AQNSWGQYGQYGQYNQYYPPPPT
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctggtgcgcagatgacggggatattagacacagatgcccctgctgtggaa
gccgcaggaagcgagtgtgccacagacccgaccgctgccgactggaccgcaggacaggtt
cctcccgcaaatcaggaaagtcacgaatacgagtcagtacaacaacagctgtattcgatg
gagcatataaagtctgaagcagaaaacatccaccaggcagatcccaccataaatgaccct
ggacaggttatcccacagcctccagaatcaaacggccaggacacgactcaatcttcagag
cccgatgcggtgaaagaagaagctggtgactccgagagccctactaacatggagctcgaa
gatgctcccaaagaggagggagcagaagaggcgattggtgctgccagtgaacaagaaccc
gggcttccttctgaatatgatagactttggaaggctgtggaagataatcctgaagatttt
aatggctgggtttatcttctgcagtatgttgaacaagagaaccacctgttggcttcaagg
aaggcgtttgatgcatttttcctgcactatccctactgttacggctattggaagaagtat
gcagacattgaaaagaaacatggctttatacagatggcagatgaggtatatcgacgtggc
cttcaggccatcccgctcagtgtggacctgtggcttcattacatcacgtttctgagagag
aaccaagacaccagtgacggagaagctgaaaatcgcattagagcgtcatacgagcatgcg
gtcctcgcctgtggtacggatttccgctcggatcgtctgtgggaagcctatatcaactgg
gagaccgagcagaataggctggccaatgtcacggccgtttatgaccgaatcctctgcatt
cctactcagctgtactcccagcacttccagaagttcaaagaccacgtgcagaacaataat
cccaaacacttcctgtctgaagaagagttcgtgcagctccgggtggaactggccaacgca
aacagaccgaacggagaagacgccccgggtgaagagcttccgccgggtacggacgacctg
ccggatcccgcaaagagagtgactgagatcgagaacatgagacacaaagtgatcgagact
cgtcaggagatcttcaaccataacgaacacgaagtcagcaagcgctgggcgtttgaagaa
gggataaagcgtccgtatttccacgtcaaagccctggagaagacccagctcaacaactgg
agagagtaccttgactttgagctagagaacggcacgccggagcgggtggtggttctgttc
gagcgctgcctgatcgcctgcgcgctatatgaggagttttggatcaagtacgccaagtat
ctagagagctacagcactgaaggggtgagacacatctacaagaaggcctgcagcattcac
ctgcccaagaaacccaccgttcatctcctttgggcggcttttgaggagcagcaaggaaac
atcgacgaggcgcgtggcattttgaaagcgatagaggaggctgtgccgggtctggccatg
gtgaggttgcgcagggtgagtctggagcggcggcacggcaacatggatgaagtggaagcc
ttgttacgcgatgctattaccaatggaagaaacggcagcgagtcgtcgttctattctgtt
aaactggctcgacaaatgctgaaggtgcagaagaacattgcaaaggccaaaaaagtgctg
ctggaggctgtggagaaagatgagacaaatccaaagctgtacctgaacctgttggagctg
gagtacagtggtgatgttcagcagaacgaagctgaaatcatcgcctgctttgatcgagcg
ctgggcagctccatgtcactggagtcacgcgtcacattctctcaacgcaaaatcgagttc
cttgaggactttggcagtgatatcaatgtactcgtggccgcctatgaagagcatcagagg
cttgaaaaggagagcgaatcattgaagaggaaagcagagaatggctcgcaggagtccgac
tcaaagagacaacggacagatgaccaatcggcagcttcgggtcaaatgatgcaggacatg
caggctaacagtgcaggatacaactacaacaactggtatcagcaatataattcctgggga
gctcagaattcctggggtcaatatgggcagtacgggcagtacaaccaatactatcctcca
ccgccaacataa
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