Paramisgurnus dabryanus (large-scale loach): 135738709
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Entry
135738709 CDS
T10799
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135738709 (ddx1)
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135738709 (ddx1)
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135738709 (ddx1)
Spliceosome [BR:
pdab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135738709 (ddx1)
Transfer RNA biogenesis [BR:
pdab03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135738709 (ddx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF7647
Motif
Other DBs
NCBI-GeneID:
135738709
NCBI-ProteinID:
XP_065112828
LinkDB
All DBs
Position
12:complement(14175540..14183974)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFGEMGVMPEIAQAVEELDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRSAVKTGGAVFNKWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKAVTKGKYYYEVSCHDQGLCRVGWSTGQASLDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDLDKNHLSFSKNGNDLGLAFEIPPQLKNQPFFPSCVLKNAELKF
NFGEEPFKNQPKDGFVALSQASDGHVVKSTQTGSAKVSEVKSSSHSPKALIIEPSKELAE
QTLNNVSQFKKYVENPKLRELLIIGGVAAKEQLSILESGVDIVVGTPGRLDDLISTKKLD
LSQVRFLVLDECDGLLTSGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKLDRLWEKLGKNHVRTDEVHASDSTHPGAN
TPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIKQGGGSDKKGHQF
SCVCLHGDRKPDERKRNLDRFKKKEVKLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVAMEKEKVWYHVCPNRGKGCYNTKLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGLYKGHVDILAPTVRELANLER
EAQTSFLHLSYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattcggcgaaatgggagtgatgcctgaaatcgcgcaggcagtggaagaattg
gactggctcctgccgacagacattcaggccgaatccataccactgattctgggtggagga
gacgtgcttatggcagctgagacaggaagtggaaaaactggagcctttagtattccagtc
atccaaatagtctacgagacccttaaagaccaacaggaggggaagaagggacgcagtgcc
gtgaagacaggaggagcagttttcaataaatggcagatgaacccttatgacagaagtcca
gcatttgctattggtccagatggtctttgttgtcagagcagagaattcaaagagtggcat
ggatgtcgttccaccaaagcagtcacaaagggcaagtattattacgaggtgtcctgtcac
gatcaagggttgtgcagggtgggctggtccactggccaagcatcactggacttggggacg
gataaatatggatttggctttggaggaactgggaagaagtctcacaataagcagtttgat
agttatggagaggagttcactatgcatgataccatcggttgctacatagatctggacaaa
aatcatttgtcattctcaaaaaatggtaatgatctgggtttggcatttgaaatccctccg
cagctgaaaaaccagcccttctttccttcctgcgtgttaaagaacgctgaactgaaattc
aactttggtgaagaacctttcaaaaaccagcccaaagacggctttgtggccctgagccag
gcttcagatggtcatgtggtcaaatccacccagacaggcagtgctaaagttagtgaggtc
aaatccagttctcactcccccaaagcgctgatcattgaaccgtctaaagagctggctgaa
caaacccttaacaatgtcagccagttcaagaaatatgttgaaaaccccaaactaagggag
cttcttatcatcggaggtgtggctgctaaagaacaactctccattttagaaagtggggtc
gatatagtagttgggaccccaggtaggctggatgatctcatatccacgaaaaagttggat
ttatcccaagttcgcttcctggtcctagatgagtgtgatggacttctcacatctgggtac
actgacttcatcatgagggtctacaaccagatcccccaggtcacctcagatggcaagaga
ctacaggtgatagtttgctctgccacgctgcactcgtttgaggtaaagaagctctcagag
aagatcatgcattttcccacatgggtggatctgaaaggagaggattctgtaccagaaacc
gtccatcacgtggtggtgccagtcaaccccaaattggacaggctgtgggagaaactgggc
aagaaccacgttaggactgatgaagttcatgccagtgatagcacacaccctggagccaac
accccagagatgtggtcagaggccatcaagattctgaagggagagtatgccgtgagagcc
attaaagagcataagatggatcaggccatcatcttctgcaggacaaagatcgactgtgac
aatatggagcagtactttatcaaacaaggaggaggttcagacaagaaaggacaccagttc
tcttgtgtttgtcttcatggtgacaggaaaccagatgagcgcaaaagaaacttggatcgg
ttcaagaaaaaggaagtgaagcttctgatttgtacagatgttgctgctagaggaatcgat
atccatggtgttccttacgtgataaatgtgactctaccagatgaaaagcaaaactacgtt
caccgtattggaagagttggccgagcagacaggatgggtctggctatatcactggttgct
atggagaaagagaaggtgtggtaccacgtttgtcccaacagaggaaagggttgctataac
accaaactcaaagagaacggaggttgcactatctggtataatgagaaagagctgttgtct
gaaatagaggaacatctgaaatgcaccattactcaatgtgaacctgacatcaaagtacct
gtagatgaattcgatggcaaagtgacttacgggcagcgcagggctactggaggtggtctc
tataagggccatgtggatatattggccccaactgtacgggaattggccaacctggagaga
gaggcacaaacatctttccttcatctcagctatctacccaaccagctcttcaaagcattt
taa
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