Paramisgurnus dabryanus (large-scale loach): 135738945
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Entry
135738945 CDS
T10799
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135738945 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135738945 (fip1l1a)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135738945 (fip1l1a)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
DUF7369
Motif
Other DBs
NCBI-GeneID:
135738945
NCBI-ProteinID:
XP_065113222
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All DBs
Position
12:21013234..21048289
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AA seq
461 aa
AA seq
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MSTTEVQKTADESVDDETDWLYGEDNIADEETTEKEIFSALIGDVDGVNELNYQESESDS
DDDVCVTIGDIKTGGSQSLSLGSSSISLNIKSLGSGCKSRVLEVDAEGNVLETDGEPFEE
KPWRKPGADLSDYFNYGFNEDTWKTYCDKHRRLRMSLEILSLSSSDKITVHPSSSDLSEY
ASILTRKSSGSINVIGGQTGTISRVEGRRRHGADENNIQVVSEHSSDTELPSPKLLPFFP
PNIPPPPFPPPSISTTPPLIPPPPPGYPLPPGASLSMISGHLGGGRSVPPFSDGRSISPY
PFPPGVYPTAPSMASWPRVLNSGKPWDYYGHQKEREREKGHKKERERERYREGDQSPSSQ
DHRSEEERPSRHRDHTHYRRERYRESSAREGESDRRREKRQRERSEPHRSSRSGSSRRHH
YSDDADSHRRHRHKRSRHKRESGEPSEECSVDQDNQSEVPE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccactacagaggtgcaaaaaactgctgatgagagtgttgatgacgagacggactgg
ctttatggggaagataatattgctgatgaagagactacagaaaaagaaatcttcagtgct
ctcattggtgatgttgatggtgtgaatgaactaaattaccaggagagtgaatcagatagt
gatgatgatgtgtgtgtgaccatcggggacattaaaacaggcggatcccagagcttatca
ttagggtccagttcaataagtctaaacataaaatccttgggatcaggctgtaagtccaga
gtactggaagtggatgctgaaggcaatgtcctggagacagatggggagccttttgaagag
aagccatggaggaagccaggtgcagatctttcagattattttaactacggttttaatgag
gacacctggaagacgtactgtgacaaacacagacgactgcgcatgagcctggagatctta
agcttgagctcatctgacaaaataacggtacatccaagttccagtgatctgtccgaatat
gcatccatcttaaccaggaagtcaagcggttccatcaatgttatcggaggacaaactggg
accatcagtcgagtggaaggccgaagacgtcacggcgcagatgaaaataacatccaggtt
gtgtctgagcattcctcggatacagagctaccttccccaaagctgctgccattctttcct
ccaaatatcccacctccaccatttcctcctccctccatcagcaccacaccccccctcata
cccccaccaccgcccggttatcctttacctcctggcgcctctttgtctatgataagtgga
catttgggtggaggacgctcagttcccccgttcagtgatggacgttctatttcaccatac
ccctttcctccaggtgtgtacccaactgcaccaagcatggcttcttggccccgtgtttta
aacagtggtaaaccatgggactattacggccatcaaaaagaaagggaaagagagaaaggc
cataaaaaagagcgcgagagagagcgataccgagaaggagatcagagtccctcctcacag
gaccacagaagtgaagaggagcgcccgtctcgacacagagatcacactcattacaggaga
gagaggtatcgggaaagctcagcaagagaaggagagagtgacagacgtagagagaaaaga
caaagagagaggagtgagcctcaccgatcctctcgcagtggcagcagtaggaggcatcat
tatagtgatgacgcagatagccacaggaggcacaggcacaagcgctccagacataagcga
gagagcggggaacccagcgaggagtgcagtgtggatcaggataaccagtcagaggtccct
gaataa
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