Paramisgurnus dabryanus (large-scale loach): 135738961
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Entry
135738961 CDS
T10799
Symbol
brf1b
Name
(RefSeq) BRF1 general transcription factor IIIB subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135738961 (brf1b)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
135738961 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
135738961
NCBI-ProteinID:
XP_065113251
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All DBs
Position
12:complement(22051423..22125650)
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AA seq
698 aa
AA seq
DB search
MSRQCKNCGGSDIDIDPARGSAVCTACGSVLEDNIIVSEVQFVENSGGVSSAVGQFVSAD
GTSKTPVLSTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSKH
LTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLFLARELCINAPAV
DPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHD
FRRTVKEVISVVKVCEATLRKRLTEFEETPTSNLTIDEFMRVDLDAECDPPSFVAGKKKL
KMQQLEQELAKKLEEYQGQINSYRDEIETQLAMSSRTKLRGVYASYAREDDDCVSLVSEP
AGDGEEPEDEELEAAAEHLNQEFISQVLPELKQGHQGETEAQEGSKETEQLSGRSPHVPL
KALLGPLPSAASLGLTDTIRECITEDRANADDKSDNGELDLDGIDEDEIEKYILNEIEVE
AKTELWMKQNEEYLKEQKEKEERIAKEKEQGTYKEKPKKPSKKREPILASTAGEAIEKML
EQKKISSKINYDVLRDLNSKGGENTTTQQAEDPAASSSGRKKLTRRKKQPNKSNLGLAKP
ASLMGKRLRPLISSVPKKKRTEAKPVSPSITTMLPPAAPEPPVAPTPPPVVESGPVAYEE
PAEEEEEIEEEPEESCVSAMQLIGGNDYGCEAEEEEVF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcaatgtaaaaattgtggtggatcagacattgacattgatccagcccgggga
agtgctgtctgcacggcctgtggctcagttttggaggataatattattgtatctgaagtc
cagtttgtggaaaacagcggaggggtatcttctgctgtcggccagttcgtgtctgcagat
ggtacctctaaaactccagtcctaagcaccgggtttcacacaagtctgggaaaagaatca
cgggcacagacgctccagaatgggaaacgacagatacacaacctcggcagccagctgcag
ctaaaccagcactgcttggacacagcctttaatttctttaagatggtggtgagcaagcac
ttgacacgagggcgcaagatgacacacgtgattgccgcctgcctctacctggtctgcagg
acagagggaacgccacacatgcttttggacttgagtgatcttttacaggtgaatgtgtac
attctgggaaagaccttcctgtttttggctagagagctctgcatcaatgcccctgccgtt
gatccatgtctgtatattccacgattcgcccacatgttggagtttggtgaaaagactcat
gaggtttcaatgactgctctcagactgctgcagaggatgaaacgggactggatgcacact
ggacggcggccatcaggcttgtgtggggcagctctgctggtggcagctcgtatgcatgat
ttccgtcgcacggtgaaggaggtgatatctgtcgtcaaagtgtgtgaggccacgctaaga
aaaaggctgacagagtttgaggagacccctacgagtaacctgaccattgatgagttcatg
cgggtggaccttgatgcggagtgtgatcctccatcatttgtcgccggaaagaaaaaactc
aagatgcagcagctggagcaggagttggccaagaaacttgaggagtatcaaggtcagatc
aactcataccgggatgagattgagacacagctggcaatgagcagcagaaccaaactaaga
ggggtttatgcctcctacgcaagagaagatgacgactgtgtttctctggtctctgagccg
gccggggatggggaagaaccagaggatgaagaactggaggctgcagccgaacacctcaac
caggagtttattagtcaggtgttgcctgagctaaagcaaggccatcagggcgagacagag
gctcaggaggggagtaaggaaacagagcagctctccggccgttcccctcatgtacccctg
aaggccctccttggccctttgcccagtgcagcaagtctgggtctaacagatactatacgt
gaatgcatcacagaggacagagcaaatgcagatgataaatcagacaatggagaactagat
ctggatgggattgatgaagatgagattgaaaagtacattttgaacgagattgaggtagag
gcgaaaaccgagctgtggatgaaacagaatgaggagtatttgaaggaacagaaagaaaaa
gaggagagaatagctaaagaaaaggagcaagggacttataaggagaagccaaagaagcct
tccaaaaagcgagaaccaattctggccagcactgcaggagaggccatagagaagatgttg
gagcagaagaagatctccagtaagattaattacgatgttctgcgagacctcaacagcaag
ggtggagaaaacaccaccactcagcaagccgaagatccagccgcaagcagctccggacgc
aagaagttgacccgccgcaagaaacagccgaacaagagcaatctcggcctggctaaaccc
gccagcctcatgggcaaaaggctccgccccttgatttcatctgttcccaagaagaagagg
acagaagctaaaccggtctcccccagcatcaccaccatgttgcctcctgcagccccagag
cccccagttgcccccactcctccccctgtggtggaaagtggccctgtggcatacgaggag
cctgcagaggaagaggaggagattgaagaagagccagaggagtcttgtgttagcgccatg
cagctgataggtggaaatgactatggctgtgaagctgaagaagaagaagtattctag
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