Paramisgurnus dabryanus (large-scale loach): 135738975
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Entry
135738975 CDS
T10799
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04137
Mitophagy - animal
pdab04140
Autophagy - animal
pdab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135738975 (hif1ab)
04137 Mitophagy - animal
135738975 (hif1ab)
04148 Efferocytosis
135738975 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135738975 (hif1ab)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135738975 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
135738975
NCBI-ProteinID:
XP_065113275
LinkDB
All DBs
Position
12:22426891..22442157
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AA seq
771 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARCRRGKESEVFYELAHELPLPHNVTTHLDKASIMR
LTISYLRMRKLFSSDDETNKENEKESQLNPFYLKALEGFLMVLSDDGDMVYLSENVSKSM
GLTQFDLTGHSIFDFSHPCDQEELREVLVHRTGSKKSKEQNTERSFFLRMKCTLTSRGRT
VNVKSATWKVLHCTGHIRVQEHSDTSGECGFKEPPLTYLVLICEPIPHPSNIEVLLDSKT
FLSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQAT
TGQYRMLAKKGGYVWVETQATVIYSPKNNQPQCIVCVNYVLSGIVEGDVVLSLQQTKTED
VEKESKEVEHLASEVNVLTLFKSEDDKSSMKGSQPYDELKEDPEALTLLAPAAGDTIIAL
DFSNSDSDMQLLKEVPLYNDVMLPSSSEKLPLSLSPLTPTEPTPALSKLETEAEDFTYRV
TTNSTNTPTTSGLCSSGPNSPIDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPFSNQDM
EDLDLEMLAPYIPMDDDFQLRIPSPLDPTPSGLHSVLAMNSLFQPLPTPGSPASASSSPA
KQEASSRAPSPLHLLQEVCSAPVSPFSGSRDASPARSSTPQLNNRMPVGDKELSPKMLAI
QNTQRKRKLEEVTSLSEAVGLGALLQSVDSAIEPGKRAKVVEVKGSGVLGGNKTILILPS
EMASRLLSSSYESSRGLPQLTRYDCEVNAPVQDRHHLLQGEDLLRALDQVN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tctagggatgcggcccgatgtcgcaggggaaaggagtcagaggtgttctacgagctagcg
cacgaactccccctgccacacaatgtcaccacccacctggacaaagcctccatcatgagg
cttaccatcagctatctgcgcatgaggaagctgttcagctctgatgatgagactaataag
gagaacgagaaggagagtcagctcaacccgttttacttaaaggccctggagggtttcctc
atggtcctctctgacgatggagatatggtttatctctctgagaacgtcagcaagagcatg
ggcctcacacagttcgatctgaccggtcacagcatctttgacttttcacacccatgtgac
caggaggagttgagagaggtgctggtccaccgaactggatccaaaaaatccaaggagcaa
aacacggagcgaagcttcttcctccgaatgaagtgtacgctcacaagcagaggacgcact
gtcaatgtcaagtctgctacatggaaggttctccactgcacaggacacatccgcgtgcag
gagcacagcgacacttccggtgaatgtggctttaaagaacctcctctgacctaccttgtg
ctcatctgtgaacccattcctcatccctcaaacattgaggttctgctggacagcaagact
ttcctcagccgccacactctggacatgaagttctcatattgtgatgagaggatcacagag
ctgatgggatatgagccggatgatctgctcaacaggtctgtgtatgagtactatcatgca
ctggattcagaccacctcaccaagacacatcacaacttgtttgcaaaaggccaggctacc
acaggccagtaccgcatgctggctaaaaaaggcggttatgtgtgggtggagactcaggcc
accgtcatctacagccctaagaataaccaaccacagtgcattgtgtgtgtcaactatgtt
ctcagtggcattgtggaaggggatgttgtcctgtccctgcagcagaccaagacagaggat
gtggaaaaagagagcaaagaagtggaacatttagcgtctgaggtgaatgtgctcacactt
tttaagtctgaggatgacaagagctcaatgaagggctctcaaccatacgatgagctgaaa
gaggatcctgaggccctcaccctattggcacctgccgcaggagacaccatcatcgctctg
gacttcagcaactccgactctgacatgcaattgctcaaggaggtgccgctctacaatgat
gtcatgctgccctccagcagcgagaagctgcctctgagtctatctcctctgaccccaact
gagcccacaccagctctaagtaaactggagactgaagcagaggactttacttaccgcgtg
accaccaactccaccaacacacccaccacatctgggctctgctcctctgggcccaatagc
cctatagattactgcttccaagtggactccgacatcagttctgaatttaaactggatctg
gtagagaaactatttgctatcgatacagaggcaaagaccccatttagcaaccaggacatg
gaagatcttgacttggagatgcttgctccatacatcccaatggatgatgacttccaactg
cgtatcccctctcctctggatccgaccccctccggccttcactcagtgttggccatgaac
tctttgttccaacctttgcccacacctggatctccagcgtctgcctccagcagtccagca
aagcaggaggcatcgtcacgggccccttcacccctgcatctactgcaggaggtgtgcagt
gcccccgtctcacccttcagcggtagtcgtgacgcttccccggcacgttcttccacccca
cagctgaacaacagaatgcctgtgggtgacaaagagctgtctccaaagatgttggctatt
cagaacacccaacgaaagaggaagctggaagaggtgacgtcgctttccgaagctgttgga
ctgggtgctttgcttcagagtgtggacagtgccattgagcctggtaagagggcaaaggtt
gttgaggttaaaggatcaggtgtgcttggaggaaataaaaccattctcatactgccctct
gaaatggccagtcgtcttttgtccagctcttatgagagcagccgcgggttgcctcagcta
acacgctatgactgtgaggtcaacgctcctgtccaggaccgtcatcatctgctgcaggga
gaggatctcctgcgtgctctggaccaagttaattga
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