Paramisgurnus dabryanus (large-scale loach): 135739785
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Entry
135739785 CDS
T10799
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135739785 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135739785 (rsf1a)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
135739785 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
DUF3618
Motif
Other DBs
NCBI-GeneID:
135739785
NCBI-ProteinID:
XP_065113906
LinkDB
All DBs
Position
9:31587884..31598422
Genome browser
AA seq
1297 aa
AA seq
DB search
MAASSTTAGLPAAPGPGFAVLCSFLERYGSALDLPELTFPQLERYLQDTSVVPPPLIELH
VKLLRKIGKSVTPDRWEKYLMKVCQEFNSTWAWELERKSYAEMTVESKTEILKYLCECQF
DDNLKFKTLVNEEDPDKMRLQPIGRDKEGLLYWFQLDQDQNVRVYAEEQDDSDGSSWRCI
ARTRNDLADTLEQLKAKIDSSVNQEGLDGQTSPKTERDDFKGEAEDLKNCASGQMDLTNS
INHSRVIGLKPESVKRETSPDAVKPDREVKDEVELKETVISKPKSEPIPVIDNRVSTIKV
LVKEEVKDSPRAWNAISVVMPPSSIAHEKPTQDNSKEMKFENVTRAIKSDQQAKIPLKKR
ELKRSEGYDISNHYSNVNHNNNNLNTNGSLSTGGIIVRNPAVLPVKENIRIEYPTEKVST
TGVHQDLNITSSCGNETSSVTYQKTIREQYVGVGVIKGPLELKRPLTENDKATDRNGLHG
NGMILKPGAGDADGVRQSVLVGKSVIKTDNGAVSCSVPDELPSEDVSKTSGKASDLVEHE
SPTVEDVKESVEENKNEKAIKIKSSNSDRRKTDKTTENESKDKGLKSPRKRSLEKSKSKL
HRGEEVEESSSKKVKGETHGHYDDEEVSSELQKEGIRLKIKIPLHRRTPELQHKEVESET
GNRRSLRRSPRICKPSPKVAHIQDRKQDRKLTASSTAQDEDEHMKDEEAKVQPKKVDVER
QTKSLKAKRRHRRTRWSKIRSKNCKSKEALPEDEDAGDDKATNDEDNKSERGDDKTETDS
DGSNELPPEDACKHCGLANHPELILLCDMCDSGYHTACLRPLLMIIPDGEWFCPPCQHKL
LCERLEEQLQNLDTALKKKERAERRRERLVYVGISVENIIPNPDGDAEDLTEKKKDAKKI
KNLGRRSTRTRKSISYRFDDFDEAIDEAIEEDLQDEAGPGRDTHVSTVTGQQQNVVSRES
RRSVKPLAPRKRKRRRLNDLDSDSTVDEEESEDEFQLSDRCVMEEEEFVVSGEDDDADVG
SREGSEWGSAESDTGNQPRSRRTSRTTHTQRAMRSRRRLYNRRRGSSEEEVLDTDEEEEE
EEEMETEGSNEFSESDVDTSKRRPRRRQNSFVNYYETSESEGSQKASNQKNPSLLHRRRL
SSSNSEESILSKDSEPKPLQRRDRGQRRGSKRNDSKQRHKQLKQRQQRSSSEEEGETEGS
DEDQRPLRKRSNRIETDEEEEEGLGHRKHNTRGKIIEDSRLKHTARNSAGPRGPSRHNGL
VPLRATAQDDEDEDEDEEEFTGVTDLVNFVFDSEQLS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcgagcactacagcgggtctcccagcagctcccggtcctggttttgcggtg
ctttgctctttcctggagcgctacgggtctgctctggatcttcccgagctgacgttccct
caactggagcggtacttacaggacacatcagtggttcctccacctttgattgagcttcat
gtcaaactactgcgtaaaattggcaagagtgtcacaccggacagatgggagaagtatctt
atgaaggtgtgccaggaatttaacagtacctgggcttgggagctggagagaaaaagctat
gctgaaatgactgttgagtctaagactgagattttaaagtacttgtgtgaatgccagttt
gatgacaatctcaagtttaagacattagttaatgaggaagacccagacaagatgcgtctg
cagcccattggtagagacaaggaaggccttttatactggtttcagttagatcaagatcag
aacgtgcgtgtttacgctgaagaacaagatgactcggatgggtcctcctggagatgcatt
gcaaggacaagaaatgatcttgcagacacacttgaacagctgaaagccaagattgactca
tctgtcaaccaagaggggctagatggtcaaaccagcccaaaaacagagagagatgatttt
aaaggtgaagctgaagacctgaaaaactgtgcatcaggacaaatggacttaactaacagc
atcaaccattctagagtaattgggttaaaaccggaaagcgttaaacgagaaacatcaccc
gatgctgttaaaccagaccgagaggtaaaagatgaagttgaattaaaagaaactgtaata
tccaagcccaaatcagagccaatcccagttatagacaacagagtcagcacgattaaagtc
cttgtcaaagaagaggtgaaggattctcccagagcttggaatgccatatccgttgtcatg
cctccatcttccatcgcacacgaaaagccaacccaggacaacagtaaagagatgaagttt
gaaaacgtgaccagagctataaagagcgatcaacaagctaaaatccccctgaagaaaaga
gagttgaaaagaagtgaaggttatgacatcagcaatcactacagcaatgttaatcataac
aacaataaccttaacaccaatggtagcctcagtaccggaggtataatcgttcgcaaccct
gccgtattaccggtgaaggagaacatcaggattgaataccccactgagaaggtgtccact
accggtgtccaccaagacctcaacattacatcatcctgtgggaacgagacatccagcgtg
acgtaccaaaagacaatacgagaacaatacgtcggtgttggagtgatcaagggtcccctc
gagctaaagaggccattgactgaaaacgataaagcaacggacagaaatggtcttcatgga
aatggaatgatcttgaagcctggggctggagatgctgatggtgtcagacagtctgtcctt
gttgggaaatctgtgattaaaacagacaacggtgcagtttcttgtagtgtcccagatgaa
ttaccttctgaagatgttagcaagacgtctggtaaggcatcagaccttgttgagcatgaa
tctcctacagttgaagatgtgaaggaaagtgtggaggaaaacaaaaatgagaaagctatc
aaaataaagagtagcaactcagacagaagaaaaactgataaaacaactgagaatgaaagt
aaagacaagggtttgaaaagcccaagaaagaggagcttagaaaagagcaaatccaagcta
cacagaggagaagaggttgaagagtcctcttccaaaaaggtaaaaggtgaaacgcatgga
cactatgatgatgaagaggtatcttcagaacttcagaaggaagggattcgtctgaagatt
aagatcccgcttcacagacgtactcctgaactccagcacaaggaggttgagtcagaaacc
ggcaatcgacggtccctacgaagatctccaagaatctgcaagcccagccccaaggtggca
catatccaggatcggaaacaagacaggaaacttacagcctcctctacggctcaagatgaa
gacgagcatatgaaagatgaagaggccaaagtacagcccaaaaaagtggacgttgaaaga
cagaccaagtctctaaaggccaagcggcgacacaggcggacccgttggtcgaaaattcgt
tctaaaaactgcaaatccaaagaagctctgccggaggacgaggatgcgggtgatgacaaa
gctacaaatgatgaggacaacaaatcggagagaggagatgataagacagagaccgattcg
gatggatcaaatgagcttccgcccgaagatgcttgtaaacattgtggtcttgccaaccac
ccagaactgattcttctgtgtgacatgtgtgacagtggttatcacacagcctgtctgaga
cctcttcttatgatcattcctgatggagaatggttctgtcctccctgccagcataagctt
ctctgtgagaggttagaggaacagcttcagaatctggacactgctctgaagaagaaagag
agagctgaacgcaggcgtgaacgcttagtgtatgtgggcatcagcgtggagaacattata
ccaaatccagacggtgatgcagaagacttgacagagaagaaaaaagatgccaagaagatt
aagaatctgggccgccgatcaaccaggacgaggaaatctatcagttacaggtttgatgac
tttgatgaagccatcgatgaagcgatagaggaagatcttcaagatgaagcaggtcctgga
cgtgatacacatgtgtcgaccgtcacgggtcaacagcagaacgtggtcagccgtgaaagt
cgccgttctgtgaagcccctcgcaccacgcaagaggaaacgccggcgacttaacgatttg
gacagcgacagtacggtggatgaggaagagagcgaggacgagtttcagctcagtgacagg
tgtgttatggaggaggaggagtttgtggtttcgggagaagatgatgatgctgacgtaggc
tctcgtgagggcagtgaatggggcagcgctgaaagtgacactggtaatcaaccgagatcc
agaagaaccagcagaaccacacacacccaaagagccatgaggagcagacgcagactttac
aacagacggagaggctcctcagaggaggaggtgttagacacagatgaggaagaggaggag
gaagaggaaatggaaacagaaggatcgaatgagttcagcgagagtgatgtggacacaagc
aaaagacgtccgcgacgccgtcagaactcttttgtcaactactatgaaacctcagaatcg
gagggatcacaaaaagcgtccaatcagaagaacccatctcttcttcaccgtcgccgatta
tccagctccaacagtgaagagtccatactttctaaagactcagagccaaagcccctgcag
agaagagacagaggacagaggagagggtctaagaggaacgactccaaacagagacacaaa
cagcttaaacagagacagcagagaagctccagtgaggaagaaggagaaacagaggggtct
gatgaagaccagcgacctctacgcaagagatcaaaccgcatagaaacagacgaagaagag
gaagaaggcttggggcacagaaagcataatacacgaggaaaaatcattgaggactccagg
ttgaagcacacagccagaaacagcgcagggccccggggtccctccaggcacaatggcctg
gtccctctgagggccacagctcaggatgacgaggatgaggatgaagatgaggaagagttt
actggagtcacggaccttgttaactttgtttttgacagtgaacaattgtcctga
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