Paramisgurnus dabryanus (large-scale loach): 135739882
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Entry
135739882 CDS
T10799
Symbol
dchs1b
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135739882 (dchs1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135739882 (dchs1b)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Cadherin related
135739882 (dchs1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Ig_Cad99C_N
Ig_BT4661_3rd
Big_9
CADH_Y-type_LIR
RIFIN
TMEM154
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
135739882
NCBI-ProteinID:
XP_065114044
LinkDB
All DBs
Position
10:13280764..13391829
Genome browser
AA seq
3293 aa
AA seq
DB search
MMTLFNDRCGPFHMRVFSRLRMLLVICIILELLMAMVGGEGTPGVLELQLDEEQPAGTIV
GDISAGLPPGVTASLYFISDHEGTGIGDLHIDETTGIIKTARRLDREKRDHYSFIAVTMT
GLTIKVSITVNDINDHAPAFPKKKVTLKIPEQTAVGTKFSLDPATDADKDQLTVQGYQIK
DGNVGQVFRLETKRAANKVLYLDLVVSGVLDREKRSTYSLVLEAFDGGAPRKTGQMTVDV
LVQDINDHAPVFNQSRYHAIISESLPQGSNILQVFATDADDGDNGLVLYEINRRQSDPDR
YFAIDSRSGVITLSKPLDYEVRKVHELVVQARDNASHPEITNAFVTIHVRDYNDNQPTMT
IIFLSEDGSPQISEGAQQGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDSIIYL
IYVDQLLDREERDSYELRVMATDAGTPPLRAESSFTIHVTDVNDNPPLFDQQAFKQTISE
VVYPGSFVLQVTARDKDQGPNGDVRYSILPDKKTHASWFTIDPVTGIITTATQLDYETDP
KPRIKVVATDGGKPPLSSTALVEIDLQDSNDNAPVFESSSYNVSIKENTAAGTCFLEVKA
DDGDGGSFGAITYSLGGSGPGSAPPSQFTINKETGQICTGVTLDRDEGSDSFDFTVTASD
GGGLTSSAHVKVSLVDINDNRPTFYPVNYAVSLSTQSAPGTSVVRVTAHDPDAGANGKVT
FHTVSGGGSNFFTLNKDTGVISLSRSLHGKANSVITMVITAQDGGGLTAPVNARVNISIV
AGSVAPPVFEQAQYYFTVSEDVLRGTEVGVVRASSRNVVSKDVTYTISAGDPDGYFMVDS
ETGALRTSLPLDHETRNFFDLEIQARSGSPPAFGEARVRITIADVNDNAPVFSPSSSESL
LLPEATKMGTVVYRVQAEDRDSGPNGQLSFDLMSTGGQRTFGVERSSGEIRLIGTLSYDS
VSRYDLQVIAKDSGAPQLSATFTLVVHIQAENDQGPAFDTMNYRVELKENTPLNTRFLQV
RALNRDPTGNGGSSKGSTPYAPLAYRLRPDGDAAGFGIASDSGWLFVKSALDREAKDIYL
LTVLATSGSGQMSKTGSATVRVSVTDENDNSPRFSQERVFLAVRENLPAGTGFGRVSATD
RDAGLNSRLTYRLLHTDRHFQINSQTGEISTRTPLDRELQSSYQLIVVVQDGGTPPRSAT
GTAHITVLDENDNAPAFSHTQSGREILIQVQEGLPAGSVIGTLHAKDPDEGENGTIFYSL
SGSRAERFSLNANTGELRSSSPLRRAEKAEYSFTVTATDRGAPSQSSSTALLIQVIGSTR
TPPKPNTLTMTLNSVEGAKPGSVIGSVRSHDQREVTVGDQVTYLVVGGTDHDGTFMVDRL
TGDVYLARELDYEKGSRYTLQIEVDDFSKAFPSSHMVNLEINVQDSNDHAPHFPEDPVTI
VIPENIRAGSSVYTFQATDKDGSGPNSEIRYSIQQRWPDIPDLFRLDPITGVLKLGRELD
HEVTPSLFLVVHATDSAVDPNQRLWGSVTARVFVTDENDNAPIFSSPTAVSVMEDQPVGF
VLLYVMARDADQGENGRVSYRIQSGNAAGRFSLSPSSGSLSILKPLDREEQESYNLTIVA
EDHGIPQHSTTQVLSIQVIDVNDEAPYFESSEFEAEIKENQPAGTSILKVSATDRDHGTN
GLVTYGGVTEDGFTINPETGVISVTQVLDRELQDHYTITVYAKDAGIPPNFAKAKVHITV
QDENDNAPAFGREHYSLEVPENLEPVELFALKATDKDTGEKGRLGYKITAGDPDGDFQLD
AFSGALSTSRPLDRERKSGYMLEVVAQDHGSPSLSSTATVEISVLDVNDNNPKFSTSGYT
IDVSEDAAVGSVVLDVTATDVDEGENGQILFFLSQEAKGAFTIDPDNGRITTTAPLDREK
RSSYTFLVYAIDLSPASPRNATAQVTATILDINDNAPFFIQDPLIINVSSGSVSTHQVVA
TMRAEDKDFGANGSVFYRFAMPVRGFAINSLTGEIQTTEKLQTLTQTQRTLIVEAMDQGS
PPQSSLGVVIIYVREQEYNGIRFSRSARDVNIQENAAKGTAVAQAQAQHPDGSRDGITYS
IFSGNKFQSFRISSSTGEIWVQSSNGLDFEDTPRLRLVVKAETTSSSSFTAVNLILQDVN
DNLPRFQLQNYVAYMHEAQGYDFPIIQVVAEDVDQGQNGQVTYSIESSSQSGLFKIDPVT
GSITTAAIMDREIWTQAKLVIKATDRGSPKLVGTATITVIIVDLNDNSPTIPIPREVRVP
ENSLVGTEITLVTGNDVDSGPVLSYSLKLDASSQGKFDIHRYNGRVSLIAPLDFEERTWY
TLTIRASDSKHQSEANLTVLVGDINDNAPTFTQDLYQVTLPEHSPAGSPVITVTATDRDS
GENGKVTYRMLSSTREGFYVDPKNGTLFLRQKAEFDPEQPSVSVVIEAHDAGTPPLSSSA
TVQIQLIDVNDNAPIFHQLEYRATVSEDQLPGATILTLEAVDGDLSQENSGFDFAIASGN
VGNAFQIESSVRFIEGHGFQTVGTLILAEGLDFEALSHYNLTIAVSDRGVPQRSSSVPAI
ITITDVNDNPPVFGRAEYAVALSEGAAAGTEILRVTATDPDSAPYAAVQYSISSGDEMKL
FSVDQWSGALRLQRPLDRESRTSHVVIVQASDGHGHFALAPISVEVKDINDNRPFFPIAT
LTASIRENQPPNSVVTVLHAIDYDTGVYGQLQYYILDHSRLEKEFFLIDQNSGEVRTRQT
FDFENANSFNFIASAVDAGNNSATVTVQVYVTGEDEYDPVFTSSDFSFEVPEGAKKGQSI
GEVQASDVDKGVDGIVLYSFPNVSPYFDVNKTTGVIYLKMDGSSSSSSGSRLKRETRLMT
MDINAHSPLDNSRVTTAQLTIDITNTSFGLATDLNILLVSIIAASLGVIVLLVIIAVTLY
LVRSRRKKKGQDTGNRTESSDTALQKLDESKPTGGDRIYHQTLPGYAGVEEGTGGSYMRG
GSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHIAARGPDSGIQQDADQLSD
ISCEPGPLDASQWFKSKKLGSLSGTLLSGQLPVYRDEGGGYLGVGRGLNISHPKDYAFPE
DGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDETLPPNNPR
RPFQPKIKTDPKPRIDPPPLITSVAHPGAKSVPPKPAMSRTFHHLASLKRSPISHEGSIS
SAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASIISTTEHSLENSNEAEMRL
NT seq
9882 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgttgtttaatgacagatgtggaccgtttcatatgcgggtgttctccaggcta
aggatgcttttggtgatttgcataatactggaactgttaatggcaatggtcggaggagag
gggacgccgggtgttttggagctccagttggatgaggagcagcccgcgggtacaatagtg
ggcgatattagcgcaggcctaccacctggagttacggcttctctatacttcatctctgat
catgagggcaccggcatcggtgatcttcacatcgatgaaaccactggaatcatcaagact
gccagacggcttgatcgagagaaaagggaccattacagtttcatagcggtcactatgacg
ggtctcacgatcaaggtctccattactgtgaatgatatcaatgaccacgcccccgcattc
cctaaaaagaaagttactttgaagatccctgagcaaacagctgtgggaacaaagttctct
cttgatccagccactgatgcggataaggatcagcttacagtacaaggatatcagataaaa
gacggcaatgtgggacaagtgttccgacttgagaccaaaagggcagctaacaaagtcctt
taccttgacttggttgtcagtggtgtccttgatagggagaagaggtctacttactctttg
gtgttggaggcttttgatggcggtgctccaaggaagactggtcaaatgacggttgatgtg
cttgtgcaggacatcaacgaccacgctcctgtttttaaccagagtcggtaccatgccatt
atctccgaaagcttacctcagggcagcaacatactgcaagtttttgcaacagatgctgat
gacggagataacggccttgtgctgtacgagataaaccgacgccagagtgatccagatcgc
tactttgccattgactctcgctctggggtcatcaccctcagtaagcctttggactatgag
gtgaggaaggttcacgagctcgtagtgcaagccagagataatgcaagccatcccgagatc
accaacgcctttgttacaatccatgtaagggactacaacgataatcaaccaaccatgacc
attatcttcctcagcgaggacggttcaccccaaatctcagaaggcgctcagcaaggtcaa
tacgttgctcgaatctctgtatctgaccccgattacggcgagtactccaatgtcaatgtg
tctcttgaagggggtgatgggaaatttgctctgaccactaaagacagtatcatctacctc
atctacgtagaccagttactggaccgagaagaaagggattcctatgagcttcgtgtcatg
gctaccgatgctggaaccccaccactaagagcagagtcctcgtttactattcacgtcact
gatgtaaacgacaacccgcctctctttgaccaacaggctttcaagcagaccatatcagaa
gttgtctatccgggtagctttgtgttgcaggtgacagcaagggacaaagaccaaggtccc
aatggtgatgtccgctacagcatcctgccagacaagaagacacatgccagttggttcacc
attgaccccgtaacaggtatcataaccacggcgacccagctggattatgagacggaccct
aaaccaagaatcaaagtagtggccaccgatggaggaaagccgccgctatcttccaccgct
cttgtggaaattgatctgcaggatagtaatgataatgcaccagtttttgaaagcagctcc
tacaatgtctctatcaaggagaacactgctgccgggacctgcttccttgaggtgaaagct
gatgatggagatggtggatcatttggtgccatcacatattctcttggtggttcaggacct
ggtagtgctccaccgagccagtttaccattaataaggagacaggacagatctgtaccggt
gtgacactggaccgagatgaaggatcggacagtttcgactttaccgtcactgcgtctgat
gggggaggtcttacctcgtctgcccatgtgaaggtgtcattggtggacattaatgataac
agacctacgttctaccctgtgaactacgctgtcagcctgagcacacagagcgcgcccggg
acctccgttgtcagggtaacagcccacgacccagatgctggtgcgaatggtaaagtgacg
tttcacactgtctctggtggtggatccaatttcttcactctcaacaaggacactggtgtg
atttccctgtcacgctccctacatggaaaggccaactctgtcatcaccatggtgatcaca
gcacaggatggaggtggccttactgcgcctgtcaatgccagggtgaacatcagcattgtg
gccggctcagtggcgcccccggtgttcgaacaagcgcagtactacttcacagtgtcagag
gacgtgcttcggggtaccgaggtcggcgtagtgcgggccagcagcaggaacgtagtatct
aaggatgtcacctacactatctctgcgggagatccagatggctatttcatggttgattca
gagaccggagcactaagaacaagtcttcctctggaccacgagacccgaaatttcttcgat
ttggagattcaagcacgcagcggctcccctccagcttttggagaagctcgtgttcggata
actattgctgacgtgaacgacaacgcccctgtattctccccatcatcctctgagtctctg
ctcctaccagaggccaccaagatgggaaccgtggtgtaccgtgtgcaggcggaagaccgt
gattcgggtcccaacgggcagcttagctttgacctgatgtcaaccggcggacagcgcact
tttggggtggagcggagcagtggggagatacgactaattgggactttgtcgtatgacagc
gtttctcgctatgacctccaggtgatcgcaaaagacagcggggcaccacagcttagtgct
actttcacccttgtcgtccacattcaggcggagaacgaccagggtcctgcgtttgacaca
atgaactaccgtgttgaacttaaggaaaacacaccactcaacactcggttcctgcaggtc
cgcgctctcaatagagatcccaccggaaacggaggctcttccaagggttccacaccatat
gcccctctggcgtaccggctccggccggatggggatgcagccggatttggaatcgcctcc
gacagcggttggctgtttgttaagagtgctttggatcgggaagccaaagatatttacctg
ttaactgttcttgctacatcaggaagtggccagatgagtaaaacaggaagcgccacggta
agagtttcagtgacggatgaaaacgacaactcgccacgtttctctcaggagagagtgttc
ttggcggtgagagagaacttgcctgctggaaccggttttgggagagtgtcggctactgac
cgtgatgctggccttaacagccgacttacatacaggctactccatacggaccgtcacttc
cagatcaactctcagaccggtgagatcagtacccggacacctctggaccgcgagctccag
tccagttatcaactcatcgtagtggttcaggatggtggtacacctccacgtagtgccaca
gggacagctcatatcacagtgctggatgagaacgataatgctccggcgttcagtcacaca
cagtccggcagggagatcctcattcaggttcaagaaggtcttcctgcaggatctgtaata
ggaacattgcatgccaaagatcctgatgaaggagagaacggcactattttttactcattg
tcaggttccagagcagaacgtttctccttaaacgcgaatactggagagctgcgctcctct
tcccccctgagacgagcggaaaaggcggaatatagcttcacggtgactgccacggaccgt
ggagcgccatctcagagctcttctactgctttgcttatacaggttattggctccacaagg
actcctccaaaacccaacacccttactatgaccctgaattcagtggagggagccaagcca
ggctctgtgattggttcagtaaggtcccacgaccaacgtgaagtaaccgtcggtgatcag
gtgacctacctggtagtgggcggaacagaccatgatggcacttttatggttgaccgtctc
acaggagatgtgtacttggctagagagctggattatgagaaggggtcacggtatactttg
cagatcgaggtagatgacttctcaaaggcctttccgagcagtcacatggtgaatttggaa
atcaacgtgcaggatagtaacgaccatgcaccgcattttccagaagacccggtcactatc
gtcattcctgagaacatacgagcaggttcctctgtttacaccttccaggcgactgataaa
gatggcagtggccccaatagtgaaatacgctattctatccaacaacgttggccggatatc
ccagatctttttcgccttgaccctatcactggagtcttgaagttgggccgagagctggat
catgaagtgacccccagcctcttcctggtggtgcatgctactgattcagccgtggaccca
aatcaaaggctctggggatctgtgacggcacgggtgtttgttaccgatgagaatgacaac
gctccaatcttcagctcccccacagctgttagtgtgatggaggaccagccagtgggtttt
gtgctactctacgtcatggctcgggacgcggatcagggcgaaaatggacgggtgtcctac
aggatccagtcaggcaatgcagcgggacgatttagtctcagtcccagcagtggctctctt
tccatcctgaagcctctggatcgcgaggagcaggagagctacaatctaaccattgttgca
gaggatcatgggataccccaacattcaaccactcaggtgctgtctatccaggtgattgac
gtaaatgatgaagctccatactttgaaagcagtgagtttgaagctgaaatcaaagagaac
caaccagcgggaacatccatactcaaggtttcagccacggaccgcgatcacggcactaat
ggtttggtgacctacggtggtgtgaccgaggatggattcacaattaatccagagacgggt
gttatatctgtcactcaggtcctggacagggaactccaggaccattacactataacagtg
tatgcaaaggatgctgggatacctcctaactttgccaaggctaaagtgcacattacagtg
caggatgagaatgataacgctcctgcttttggaagggaacattacagtctagaggtgcct
gaaaacctggagccagtggagctgttcgccctcaaagccactgacaaggatactggagaa
aagggcagactgggatataagatcactgctggggacccagatggtgacttccagcttgat
gccttctctggagctttgtctacctccagacctctggaccgtgaaagaaagagcggttat
atgctggaggttgtggcccaggatcatggtagcccctctctaagcagcacagccacagtg
gagatctctgtccttgacgtaaatgacaacaatcccaaatttagcaccagtggctacacc
atcgacgtctctgaggatgctgctgttggatctgtggtgctggatgtgacggccacagat
gtggatgaaggagaaaacggtcagattttattcttcctaagccaagaagccaaaggtgcg
ttcactatagaccccgacaacggacgaatcactaccacagcacctttggacagagagaaa
agatcttcatacacctttctcgtttatgccatcgacctttcacccgcatccccccgaaac
gctacggcccaggtaactgctaccatcttggatatcaacgataatgcccctttcttcata
caggatccacttatcattaacgtgtccagtggaagtgtgtctacgcatcaggtggtggcc
accatgagagcagaagataaggactttggagcaaacgggtcggtgttctaccgatttgct
atgccggtccgaggatttgctattaactcgttgacaggggagatccagaccacggagaag
ctgcagacgttgactcaaactcaacgtacgctcatagtggaggctatggaccagggcagt
cctccacagtcttccctaggggtggtgatcatctatgtgagggagcaagaatacaatggt
attcggttctctcgaagtgcaagagatgttaatatccaggagaatgcagctaaaggcaca
gctgttgctcaagcccaggcgcagcatccggacggcagccgggacggcatcacttacagc
atcttcagtggaaacaaattccagtcctttaggatcagctcaagtacaggtgaaatctgg
gtgcagagctccaacggattggactttgaggatactccgagactccgcctggtggtgaaa
gccgaaactacgtcctcgagttccttcacggccgtcaatctgatccttcaggacgtcaat
gacaacctaccacgattccagctgcaaaactatgtggcgtatatgcacgaagcacaaggc
tacgactttcccatcattcaggttgtggcggaggatgttgaccagggtcagaacggtcag
gtgacctacagcatcgagtcttcgagtcaaagcggcctgtttaagattgaccccgtgacc
ggcagcatcaccacagcagccatcatggaccgagaaatctggacgcaggcaaagctggtg
ataaaagccacagatcgtggaagccccaagctagtaggcactgccaccatcacagtgatc
attgtggacctcaatgacaacagtcccactatcccaataccacgggaagttagggtgcca
gaaaactctcttgtcgggactgaaatcacactggttactggaaatgatgtggattctggc
ccagtgctgtcctattctttgaagttggatgcgtcatcgcaaggaaaattcgatatccac
cgctacaacggccgtgtttctctgatagcaccgctggactttgaggagaggacgtggtat
acgctgactattcgagcttcagattcaaagcaccagagtgaagccaatctaaccgtgctg
gtgggggatataaatgacaacgcacctacttttacacaagatctgtaccaggtaacactt
ccagaacattctccagcaggcagtccggtaatcacagtaacagccactgatcgagattca
ggagaaaatggaaaggtcacttaccgaatgctgtcatcaacgagggaggggttttacgtt
gatcctaaaaatggtacacttttccttagacaaaaagcagagtttgaccctgagcagcca
tctgtgagtgtagttatcgaagctcatgatgccgggactccacctttgtcgtcttctgct
acagtccagattcaactgatagacgtcaatgataatgcccccatatttcaccaactggag
tacagagccacggtatcagaggaccagcttcctggagccaccattctaaccttggaagca
gtagatggagacctatctcaggaaaactctgggtttgatttcgcaatcgctagtgggaat
gttggaaatgctttccagattgaaagtagtgttcgttttatagaaggtcatggttttcag
acggttggaaccctgattctggcggaggggctggattttgaggcgttatcacactacaac
ctcaccatcgcagtgtcggatcgcggcgtcccccaacgcagttcgagtgtaccggctatc
attacaatcactgatgtgaatgacaatcctcctgtctttggtagagctgagtacgcagtg
gctttgagtgaaggggcagctgctggaactgaaatattacgtgtgactgcaactgatcct
gattcagctccgtacgcagcggtccagtatagcattagctctggagatgagatgaaattg
ttctcggttgatcagtggagtggggcgttgaggcttcaaaggcccctggacagggaaagt
cggacttcccatgtggttatagtgcaagcctcagatggccatggtcattttgctctggct
cctattagcgtggaggtgaaggatatcaatgacaacagacctttttttccaattgctacc
ttaactgccagtatccgtgagaaccagccgcccaactctgttgtgactgtgttacacgcc
attgattatgacactggtgtttatggacagcttcagtattatattttggaccactctagg
ctggagaaagaatttttcttaatcgatcagaactcgggagaagttcgtaccaggcagacc
tttgattttgagaatgcaaactcatttaacttcatcgcttcggctgtggatgcaggcaac
aattcagctaccgtcacagtgcaagtttacgttacaggagaggatgaatatgacccagtt
tttacctcttcagacttctcctttgaagtaccagagggagccaaaaaaggtcagagcatt
ggtgaagttcaggccagtgatgtggataagggagtggatggtattgtactctactccttt
cccaatgtctcaccttactttgatgtgaataagaccactggtgtgatctaccttaagatg
gacggatccagcagctcaagcagtggaagtcgcctaaagagagaaacccgcctaatgact
atggacattaatgcccatagcccccttgataactcaagagtcactactgctcagctaacc
attgacatcaccaacacatcgtttggtcttgcgactgacctcaatattctgctcgtaagc
ataattgctgcctctcttggagtcattgtcttattagtgataattgcagtgactctttat
ctagtaagatcaaggcgcaagaagaaaggccaggacactggaaatagaactgagtcttca
gacacagctttgcagaaattggatgagtctaaacccacagggggagaccgaatctatcat
cagacccttcctggatacgcaggtgtggaggaaggaacaggtggctcttacatgcgagga
ggttcccttgatccctctcactccagtggacgaggatctgccgaagccgcagaggacgat
gaaatccgcatgatcaacgaatacccaagagtggccagcatcacgtcctcaatgcaagaa
catatcgccgcccgaggtcctgactcaggcatccaacaggatgcagatcaactctcggac
atctcttgtgaacctgggccacttgatgcaagccagtggttcaaaagtaagaaactggga
agtctcagtggtaccctactttctggtcagcttccagtctacagagatgaaggtggaggc
taccttggagtaggtagagggttgaacatatcccatccaaaagactatgctttccctgag
gacggcaagccatcagttgatggctcccttacagccatagtggctagcgatgaggaactc
cgaggaagctacaactgggactaccttctcaattggtgccctcagttccaacctttagca
agtgtctttacagagattgccaggcttaaggatgagaccctacctcccaacaacccacga
cgaccctttcaacccaaaattaaaacagaccccaagccaagaatcgacccaccgcccctc
ataacctcagtggctcatccaggagccaaatctgtcccgcctaaaccagccatgtcacgg
acgttccaccacttagcatccctaaaacgttcacccattagccacgaaggctctatctcc
tctgcagccatgtcgcctagtttctccccttcactgtccccccttgccgcacgatctcca
gcagtttccccctttggtgtcactcaaggtccctccgcttccatcatcagcaccaccgaa
cactcactggaaaacagtaatgaagctgagatgaggctttaa
DBGET
integrated database retrieval system
