Paramisgurnus dabryanus (large-scale loach): 135740354
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Entry
135740354 CDS
T10799
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135740354 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135740354 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135740354 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pdab03029
]
135740354 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135740354 (rb1cc1)
Membrane trafficking [BR:
pdab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135740354 (rb1cc1)
Mitochondrial biogenesis [BR:
pdab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135740354 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TcdB_N
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
135740354
NCBI-ProteinID:
XP_065114688
LinkDB
All DBs
Position
22:28317654..28338898
Genome browser
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLLKFDTAYINYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYKESLEKSSTPNPKTTDEEDENEGEGET
STRSTIHCPADSQKNLKSPSPVSCAGETSSQASSSPQDRLKSSCSLKAALQEEEESPERE
PMPFFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQNM
KAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTEL
LERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRETFG
KLFRKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLSDLQYLKSCCPSEVQPYLR
VPTLCDFQPLNHHVEVLQQLVQAAQSVDEMSQTITDLLNEQKVSCSHSAHRSNVFTPRSE
STTPITSTSTKTLSTLSLKASDCQPLSLPGPLEDLSPDSIDAQTFDFETIGHPNMDTVLQ
QASLDLDSLGGSPESDFMSAVNEFVIEGNLMSPNPISDPTSPEMMVESLYSSVINAIDSK
RIQDTTTLQKENSKIATLKLSVDQYRSAAEESKNNLRKVKEDLYHFRGLVLKEQRDFGFA
LKTTTIEVRNVLNNIKDRHEENLRETQQTNLQSLKEDHEKQLLTLTEELEGNRKIVRDVQ
RAMLDLEGLVERKEKEISQLENEKERAMQEVQNLHKQALQDLEVKILKQSEELKAALLSK
DELARQLENLHFEIERGQQRIKQEMENAEKIHLQELEDQLKQQHEAELKSMRLEKQSALD
NLAQENQVKLSEVMETHSAELKEREGRLKDLDARVTELADARCKLEVELALKDAETEDMR
MQYEEVKSSQEDALKAELDAQTTALQTQIDTLNQQLQQKNEEYELGQANLRALMRLEKDH
CISELVDRHEKESTLLRHEFSALKQKSQDAEKDCEERIQKIQEDFDGQLDALRREKEEKQ
KAFKETEQDLRTVIGDLQAENALLSGRLEQERIEAKQRAEEQKEEAVKSALQEALRDVQL
QKEEIESRLLGKIELLEIQLKERQSTEMVASSVEQTEVGVDACTGFPLHSGEWTEERASL
LAKMELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKVKKEQIINELTEKLNSVMQQQE
KDKGLIETLSEDRATILQEKKQLEEELNRMRNTVLVSSSFFPPNPAPVVTEAHGACGPAH
PEILSPFASDPERLASMAAFKDEERVESAVEASMMTVHDNPMLSEEKQRILILERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNK
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaatggaagcacgttaacgtttgacactgaactt
gccgtccaaactgttttggaccttaaacatgccattcaggccaaatataagattgcgatc
cagcaccaggtgctggtggtcaatggaggggaatgtatggtggcagagaggcgcgtgtgc
agctacagcgctgggacggacaccaatccgattttcttgtttaacaaagagatgatcctg
tgcgaccgagctccaaccatccctaaaacgaccttctctatagagaatgagatggagctg
aaggtggaggagtcgctcatgatgcccgctgtctttcacacggtcgcctcccgcacacag
ctggctgtggaaatgtatgaggttgccaagaagctctgctccttttgtgagcgactggtc
catgatgaacaccttcagcaccagggatgggcggccatcatggctaacctggatgactgc
accctgtcctaccagaaattgctcctgaagttcgacactgcttatataaattatcaacag
gactttgaggacatcaaattaaaacttacaaagctgggcactgctgtctcagtcatggcc
aagattcctctacttgaatgtttgactcgacacagctacaaagaaagcttggagaaatcc
agcaccccaaacccgaaaaccactgatgaagaggatgaaaacgagggcgaaggagaaacg
tccacccggtccactatacattgccccgcagactcgcagaagaatctgaaatcgccttca
ccggtctcttgcgcaggagagacatcatcccaagcatcatcctctcctcaagacagatta
aagagcagctgtagcctaaaagcagcactacaggaagaggaggagtctcctgagagggaa
cccatgcccttttttaatgtcacgttgttggattggatcaatgtgcaggacagacccaat
gacgtggagtcggtagttagaaagtgttttgactcaatcaacaggcttgatccacgaata
atccagccgtttctaactgaatgccgtgagacgattaccaaactggataatcagaacatg
aaggccatcaaaggtcttgaggacagactgtatgcacttgaccaaatgatagcaagctgt
aagaagttggtcaacgaacagaaggaacttgctcagggatttcttgccaaccagaagagg
gcagaaaacctgaaggacacctcagttctgcccgatctgtgtttgagtcacgccaaccag
ctgatgatcatgttgaccaaccacaggaagttgttagacatcaagcagaagtgtaccact
gccaaacaggagctcgccaacaaccttcaagttcgtctcaaatggtgctgctacgtgatg
cttcacgccgatcaggatggagagaagctgcaggctctcctgaggcttctgacggagctg
ctggagcgagtgagggttgtggaggctctcagcaccgttccacagatgtactgtctcgcc
gttgtggaggtggtcaggcgaaaaatgtttataggacactacagacaatgggctaatgct
cttgtcaaagatggaaaaaacctctatgaggcggaaaaggtaaaaagggaaacgttcggg
aagcttttcagaaaatcatttctcagaaatcgcctgtttcgtgggttggattcatggcca
ccctcttcattttgtacccgaaagcctagaaagttcgactttgagcttccagatatttct
ctgagtgacctgcagtatctcaagtcatgttgtccttccgaggttcaaccttacctcagg
gtcccaacactgtgtgactttcagccactgaaccatcatgtggaagttctccaacagctg
gttcaggctgctcaaagtgtggatgagatgtcacaaacaattacagacctactaaatgaa
caaaaggtttcctgtagccacagtgctcacagatccaacgtgtttacacccagatctgaa
agcacaactccaatcacctctacctccaccaaaacattgtccactctcagtctaaaagca
tcagactgccaacccttgagtcttcctggtccattggaggacttatcaccagacagcata
gatgcccagactttcgattttgaaaccattggacaccccaatatggatactgtattacag
caagcctctttggacttggactccttgggaggaagtccagagtcggattttatgtctgca
gttaacgaatttgttatagagggaaatttgatgtcacctaatcctatcagtgatcccaca
agtccagagatgatggtggaatctctttactcttctgtcataaatgcaatcgacagcaag
cgcatccaggacactactacgctccagaaggaaaactcaaagattgcaactctcaagctg
tccgtggatcagtatcgttccgctgcggaagagtccaagaacaatttaaggaaagttaaa
gaagatctttaccactttcggggacttgttttgaaggaacaacgagacttcgggtttgcc
ctgaaaacaacaaccattgaggtccgaaatgttcttaacaatatcaaagaccgccacgaa
gagaatctaagagaaacgcaacaaaccaatctgcagagtctgaaggaagatcacgaaaag
cagttacttacccttacggaagagctagagggcaatcggaaaattgtcagagatgtccag
agagcgatgctggatcttgagggacttgtggagcgcaaggaaaaggaaatatctcagctg
gagaacgagaaggaacgtgctatgcaagaggtgcagaaccttcacaaacaggccttgcaa
gaccttgaggtgaagatcttgaagcaaagcgaagagctgaaagctgcgttgttgtccaag
gatgaacttgccagacagctggagaaccttcactttgagattgagcgtggccaacagaga
atcaaacaggagatggagaacgcagagaagattcaccttcaagaactggaggatcagttg
aagcaacaacatgaagcagaactgaaatctatgagactggagaaacaaagtgcacttgac
aaccttgcccaggagaaccaggtgaagcttagcgaggtgatggagacccactcggccgaa
ctcaaggaacgtgagggacgcctaaaagatttagatgcccgtgtcacagaacttgcagat
gcccgctgcaaactagaagtagagttggcgcttaaggatgcagagaccgaagacatgaga
atgcagtacgaggaagtcaaaagttcccaggaggatgctttgaaagcagagttggatgct
caaacaaccgccttgcagacgcaaatcgatacgctaaatcagcagctccagcagaagaac
gaagagtacgagttgggccaagccaaccttcgagccctcatgagattagaaaaggaccac
tgcatctctgaactcgtggatcgacacgaaaaggagagcaccttgctccgtcacgagttt
tcagcgctcaagcagaagtcacaggatgcggagaaagactgcgaggaacgaattcagaag
atccaggaggactttgatggccagctcgatgccttacggagggaaaaggaggagaagcag
aaggcttttaaagagacagaacaagatctgaggaccgttatcggtgacctgcaagcagaa
aacgccctgctgtctggaagattggaacaggagaggattgaagccaagcaaagggcggag
gagcagaaagaggaggcggttaaatctgcattacaagaggccttaagagacgttcaactc
caaaaagaggagattgagagcagactgttaggaaaaattgaactacttgaaattcagctt
aaagagagacaatccactgagatggtggcatcttctgtagagcagactgaggttggtgtt
gatgcctgcactgggtttcccctgcacagcggtgagtggacagaggagagggcgtctctc
ttggccaaaatggagctcttggaacgcacaaaaaatgaagagatgcaaaacctgaagacc
tcgctcattgctgagcagcagaccaactttaacactgttctgacaagagaaaaggtgaag
aaagagcaaatcatcaatgaactgaccgagaagctcaacagcgtcatgcagcaacaagaa
aaagataaaggtctgattgagacgctttctgaggaccgcgccaccatccttcaagagaag
aaacagctggaggaggagcttaaccgcatgcgaaacaccgtcctagtctcctcgtccttc
tttccaccaaatcccgcacctgtcgtcacagaagcccacggcgcctgtgggcctgcccat
cctgaaatcctctccccttttgcctccgacccggagaggctggcatccatggctgcgttc
aaggatgaggagagggtggagtcagccgtggaggccagcatgatgacagtgcatgacaac
cctatgctatctgaagaaaaacaacgcattttgattttggaaaggaccttacatatgaag
gaggaagagaacaaaagactgagtcaaagactgatgtcacagagtatgtcgtccgtatca
tcaaggcactcagagaagatcgccattcgagattttcaggtgggcgacttggttctcatc
attttggacgagaggcacgataattatgttctcttcacggtcggacccaccctttatttc
ctgcattcagagtctcttacagctttggacctcaagccagcgaccggagccacacggcgg
ccgtgggttttaggaaaagtcatggagaaggaatattgccaagccaaaaaggctcaaaat
cggttcaaagttcctcttggcaccaaattctacagagtaaaagccgtaccgtggaataag
aaagtgtaa
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integrated database retrieval system
