Paramisgurnus dabryanus (large-scale loach): 135740744
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Entry
135740744 CDS
T10799
Name
(RefSeq) nidogen-1-like isoform X1
KO
K06826
nidogen (entactin)
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135740744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135740744
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
135740744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
cEGF
Thyroglobulin_1
EGF_CA
EGF
FXa_inhibition
hEGF
SGL
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
135740744
NCBI-ProteinID:
XP_065115324
LinkDB
All DBs
Position
14:complement(14654268..14685063)
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AA seq
1391 aa
AA seq
DB search
MSLLCTLGFVALLVSVQCVTKDQIFDYGIKFGDQILDAGSDSLFELKLNLTLFFFKEKFD
SVYVSTNGFISLDKPTDESEYLNNVHPRFKMIATFLGDLDTSDEFGKVYFREDNSPDVLE
RAGNHIAEAFPDDGEWTEPSNVLIVTWENVSAHSQTGRGDELHNVRNTFQLVVANTDLVS
YAILLYPEDGLQFVSTRVDGEDQPVRVGFSEGLIPGWFGFSSQGSYYEITDGSEESVRAL
TQNTNSGTRGIWVYEIGTYQFFTSIKPGKVTETTPETDMPTPETDTPFPETDMPTPEPDT
PIPETDTPILEMDTPFPETDTPVRGMDTPTPETDTPTPETDTPTPETDMPTPEMYTPFPE
TDTATPETDTPTPETDTLTPEADTQTPETDTLTPEMDTATPEMDTPTPEIDTQTPGIDTQ
TPEADTPTLETDMWFPETDTPTPEIDTQTPETDTPIPETVTPAPKTFTPFIFDEEVHTIK
QVSFTRPVTEQHVFIDEDQSKSHYAQPRRPALPPPNPQIVVVDEDVGVSVFEYNVETCSS
DARKCSVFADCRDYSNGYCCHCQPGYYGNGKECVAEGKPQRMNGKVNGRVYVGNSPSPVE
FSNNDLHSYVVTNDGRAYIAISSVPGSIGPSLQPLPSLGGTIGWAFALEQPNYQNGFSII
GGVFDRQAEVTFQPGNEKLTIRQEFKGINEHDHLVINTELDGRIPEVPQGATVQIEPYTE
IYQYSSNYITSSSRRDYTVNMPDGSVQMRSYLWTQSIRFKSCPHEALSVPPSQQLSVDQI
FVMYDAGNQLIRYAMSNKIGSVHSGTPEQNPCFTGRHGCDSNAVCRPGQGKDFTCECAAG
FSGDGRICYDIDECSETPQVCGPYTTCINQPGSFRCECLDGFQFAGDGRTCVELNQPIDH
CRRGTHDCDGPDRARCSYTGGSTYSCSCRPGFSGNGRNCQDIDECQSVHCHSDAICYNTQ
GSFTCQCRPGFHGDGFSCSPDADREKTSCERQRESALYASSSSGVFRPRPAVGQYVPTCD
GYGAYEPTQCHASIGQCWCVDGSGLEIPGSRTRAGSRPLCIDHNVAPPVIGPTPRPDINP
LTPGANLLFAQSGRIEHIPLDGERMNKDGAMTVLHVPDKVVIAVAYDCVEKMIYWSDITQ
PAISRVNMEGGQTITLVNTDLGSPEGIAIDHLSRNMYWTDSILDRIEVSRLDGSHRRVLF
DKDLINPRPIIADPSYGLLYWADWNRDGPKIERSNMDGTDRTVLVNDDLALPNGLTYDPA
RRELCWADAGTRKVECIDPFSRIRRKVTEGIQYPFAIVSYGKNLFYTDWRREAVVAVDRQ
DGTEVEEFLPQRRSRTYGIAVTYPQCPQAGLNYCHRDNGGCSHLCLPRPGGFTCRCPDVR
DLSCVEQDENF
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttctgtgcactcttggttttgtggctctgctggtgtcagtccagtgtgtcacc
aaagatcagatctttgattatgggatcaagtttggtgatcagattctggatgctggatct
gattcattattcgagctcaagcttaatctgactctcttcttcttcaaagaaaaattcgac
tcagtatatgtcagtaccaatggctttatatcactggacaaacccacagatgaatcagag
tacctgaataacgtgcatcccagattcaagatgatcgcaacgttcctgggggatcttgac
actagcgatgagtttgggaaagtttatttccgggaagacaacagcccggatgtccttgag
agagccggtaatcatattgctgaagcgtttcctgatgatggtgaatggactgaaccctca
aacgtactcatcgtcacctgggaaaatgtgtcagctcacagtcaaacaggcagaggagat
gagttacataatgtgagaaatacatttcagcttgttgtggcaaacacagacttggtgtct
tacgccatcctgttgtacccagaagatggtttgcagtttgtttctacacgtgtggatggt
gaagatcagcccgttcgagtggggtttagtgaaggtttaatcccgggctggtttggcttt
tctagccagggttcatattatgagatcacagatggcagtgaagagtcagtcagagctctc
acacaaaatactaattcaggaacacgaggaatttgggtctatgagattggcacatatcaa
ttttttacctccatcaagcctggaaaggtaacagagacaactcctgagacagatatgcca
acccctgagacggacacgccattccctgagacggacatgccgacccctgagccggatacg
ccaatccctgagacggatacgccaatccttgagatggacacgccgttccctgagacggat
acgccagtccgtgggatggatacgccaacccctgagacggacacgccgacccctgagacg
gatacgccgacccctgagacggatatgccgacccctgagatgtatacgccattccctgag
acagatacggcgacccctgagacggatacgccgacccctgagacggatacgctgacccct
gaggcggatacgcagactcctgagacggatacgctgacccctgagatggatacggcgacc
cctgagatggatacgccgacccctgagatagatacgcagactcctgggatagatacgcag
actcctgaggcggatacgccgacccttgagacggatatgtggttccctgagacggatact
ccgacccctgagatagatacgcagacacctgagacggatacaccgatccctgaaacagtt
acaccagcccctaaaacctttactccatttatatttgatgaagaggttcacactattaag
caagtctcatttacaagacccgtaacagaacagcatgttttcatagatgaagatcaatct
aagtctcattatgcacaaccacgtcgaccagcactgccaccaccaaaccctcagattgtg
gtcgtagatgaagatgtgggtgtcagtgtgtttgagtataacgttgagacgtgctccagc
gacgcacgcaagtgttcagtgtttgcagactgcagagattactccaacggttactgctgt
cactgtcaacctggttattatggcaatggcaaagaatgtgttgctgaaggcaaacctcag
agaatgaacgggaaggtcaacggaagagtctacgttgggaattctccatctccagtagag
ttctccaataatgaccttcattcatatgtggtgaccaatgacggtcgggcgtacatcgct
atcagcagcgttccaggcagcatcggtccgtctcttcaaccgcttccttctctcggtgga
accatcggctgggcgtttgctctggagcaacccaactatcagaacggatttagcattatt
ggaggggtgttcgaccgccaggctgaggtgacctttcaacccggaaatgagaagctgacc
atcagacaggagttcaaaggcatcaatgaacacgatcacctggtgatcaacacagagctt
gacggcaggatcccggaggttcctcaaggagccacggttcagatcgaaccctacacagag
atctatcagtattcaagcaactatataacatcatcttcacgtcgagattacactgttaac
atgcctgatgggagcgtacagatgcggagctacttgtggacacagagcatcagattcaag
agctgcccgcatgaggcgctctctgtaccacccagccaacaactcagtgtcgatcaaatc
tttgtcatgtacgacgctggaaaccaactgattcgttacgccatgagcaacaaaatcggc
tctgttcacagtggaactccagaacagaatccctgtttcacaggcagacatggatgcgat
agcaacgccgtctgtcgtccaggtcaggggaaagatttcacctgcgagtgtgctgctggt
ttcagtggtgacggacgcatatgttacgatattgatgagtgttcagaaacccctcaggtt
tgtggaccttacaccacatgtatcaaccaacctggatcattccgttgtgaatgtctggat
ggttttcagtttgccggtgatggacggacatgtgttgaactgaaccagcccatcgatcac
tgtcggagaggaacacatgactgtgacggaccagatcgtgctcgatgctcttacaccggt
ggatcaacgtacagctgctcctgtcggcctggattttctggaaatggtcgaaactgtcag
gatatcgatgaatgccagtctgttcattgccatagtgatgccatctgttacaacacccag
ggctccttcacctgtcaatgtcgaccaggtttccatggtgacggcttcagctgctcacct
gacgctgaccgagagaagacgtcgtgtgagagacagcgagagtccgctctgtatgcctcc
tcttcctccggtgtcttccgtccccgtccggctgtcggtcaatacgtgccgacctgcgac
ggctatggtgcgtacgaacccacgcagtgtcacgccagcatcggtcagtgttggtgcgtg
gatggatccggacttgagattccgggctctagaaccagagcgggcagcagacccctgtgt
atcgatcataatgtggctccgcccgtcattggccccacccctaggcctgacatcaaccca
ttgactccaggagcaaatctcttattcgcccagagcggcaggatcgaacacatcccattg
gacggcgagcggatgaataaagacggggcgatgactgtgctgcacgtgccggataaggtg
gtgatcgctgtggcgtatgactgtgtggagaagatgatctactggtctgacatcacacaa
ccggccatcagcagagtcaacatggagggaggacaaaccatcacacttgtcaatacagat
ctcggcagtccagagggaatcgccatcgaccacctgtcaagaaacatgtactggacagac
tccatactggaccgcattgaggtttcccggttagacggcagtcatcgacgtgtcctgttt
gacaaagacctcatcaatccacgaccaatcattgctgaccccagttatggacttctgtac
tgggccgactggaaccgagacggacccaagattgagcgctctaacatggatggcacggac
aggacagtactggtgaatgatgacctggcactgcccaacggtttgacctatgaccctgcg
aggcgggagctctgctgggcagacgcaggtactcgtaaggtggaatgtatcgatccgttc
tctcgtatcaggaggaaagtgaccgaagggattcagtacccgttcgctatcgtctcgtac
ggcaaaaacctcttctacacagattggaggagggaagcggtggttgccgtggatcgtcag
gatgggacggaggtggaagagtttcttcctcagagacgttctcgtacatacggcatcgct
gtcacttacccacaatgccctcaagcaggtctgaactactgtcatcgggataatggaggt
tgctcacacctgtgtctgccacgtccgggtggattcacctgcaggtgtcctgacgtcaga
gatctttcatgtgtggaacaggacgagaatttctga
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