Paramisgurnus dabryanus (large-scale loach): 135740765
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Entry
135740765 CDS
T10799
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135740765 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135740765 (sptbn1)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135740765 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
135740765 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PH_13
PMC2NT
Motif
Other DBs
NCBI-GeneID:
135740765
NCBI-ProteinID:
XP_065115363
LinkDB
All DBs
Position
14:complement(2395929..2454158)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTLAAEYDHMDIQQQYQESVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRSVNANAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRSGHLQHTVREGQEMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKTRLEEACSLHQFQADADDVDAWTLDALRIVSSADVGHDEFSTQA
LVKKHKDASAEVASYRPVIDALHEQAQTLPPEQVQAANVNERLAGIEERYKEVAELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHNGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIDAKLGDLRSEADR
LSTEHPDQAKAITGRLSEINAVWEEMKETLRNREESLGEASKLQQFLRELDDFQSWLSKT
QTAIASEDMPNTLAEAEKLLGQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINSVVEAGRRLTSEGNINAERIQERATSIDERHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELTLWINEKMLTAQDMTYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIQKDGKQLVSEKPETEAIVKEKLSGLQTMWTELESTTQTKAQCLFDANK
AELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRKEVEQKFQLLLDPLIKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSMLKAESPNVEA
IRTRLDDLQQLWTLIMQETEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVKQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQCVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPPT
PEPAETQDADAQQRDGEQIAQNGLPSDQESPRDGVDGEMNGVPERSSKEGSPTPSLTKER
AVKGSQSATLPTKGQDSPTAQLEGILHRKHEWEAHNKKASNRSWHNVYCVINNHEMGFYK
DNKTAGQGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLKITDGNEYLFQAKDDEEMNTW
IQAIQNAGSASSSSEKSEITPSNQSTPVSSRAQTLPATVTMTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacattagccgcagaatacgatcacatggacatccagcagcaatatcaggagagc
gtcaacaaccgctgggatgatgattgggacaatgagaacagctcggcccgattatttgag
cgctctcgcatcaaagctctagcagatgagcgagaggccgtgcagaagaagacctttacc
aaatgggtgaactcacatctggcgcgtgtgtcctgtcggatcacggatctgtacatggac
ctgcgagatggacggatgctcatcaaactgctggaggttctgtcaggagagagactgccc
aaaccaacaaagggccgcatgcgcatccactgtctggagaacgtggacaaggctttgcag
ttcctcaaggagcagcgggttcacctggagaacatgggttctcatgatatcgtcgatggc
aatcacagactcacacttggacttatttggaccatcatcctccgcttccagatccaggac
atcagtgtggagaccgaggacaataaggagaaacgttcagccaaggatgctctgcttctg
tggtgtcaaatgaagaccgctggatatcccaatgtcaacatccacaacttcaccaccagc
tggagggatggcatggctttcaatgccctcattcacaaacacagaccagacctgattgat
ttcgacaaactgaagaaatctaatgctcactacaacctgcaaaacgctttcaacctggcc
gagcaacatctgggtctcaccaaactgttggatccagaagatatcagtgttgatcatccc
gatgagaagtccgtcatcacatatgtcgtcacatactatcattatttctccaagatgaag
gccttgaaggtggagggcaaacgtatcggaaaggtgcttgataacgccattgagactgag
aagatgattgagaaatatgaatctctggcgtctgatcttctggagtggattgagcaaacc
atcatcatactgaacaatcgcaagtttgcaaactctctggtgggagtccaacagcagctc
caggcctttaacacctacaggaccgtggagaaaccacccaaattcactgagaaaggcaac
ctggaggttcttctgttcaccatccagagcaagatgagggcaaataatcagaaggtgtac
atgccacgagaaggcaaactcatatctgacatcaacaaggcttgggagcgactggagaag
gcggagcatgaacgtgagcttgcgctgaggaccgagctcattcgccaggagaaattggaa
cagctcgcccgacgattcgaccgcaaggccgccatgagagaaacctggctgagcgaaaac
caacgactcgtttcccaggacaactttggatttgacctccaggcggtcgaggcagctacc
aaaaaacatgaagccatcgagacggacatcgcagcgtacgaggagcgcgtgttggctgtg
gtcgccgtggcgaaggagctggaggcggagaactatcatgacatcaaacgcatcgcggct
cgtaaagacaacgtcctgcgtctgtgggaatatctgctggagcttctgaaagctcgcaga
cagcgtctggagatgaacctcggcctgcagcgggtcttccaggagatgctttacatcatg
gactggatggatgagatgaagatgttgcttctgtcccaagactacggtaaacatcttctg
ggtgttgaagatctgctacagaaacacgctttggtggaggccgacatcgccatacaggcc
gaccgcgtgcgatccgtcaacgccaatgcacagaagttcgctgtggatgaggaaggctac
aagccctgtgaccctcaagtcatccgggaccgtgtggctcacatggagttctgctatcag
gaactgactcagctcgctgccgaacggcgcgcacgtctggaggagtcccgtcgcctctgg
aagttcttctgggagatggccgaagaagagggctggattcgcgaaaaagaacagatcttg
tcctcggacgactgcggcaaagatctgacgggtgccgtgcgtctgttgagtcagcaccgc
gcactcgaggatgaaatgagcggccggtccggacatcttcagcacacggtgcgcgaaggt
caagaaatggccgatgctggccacttcggtgaagccaagatccgcgagcgcatcgctgac
gtgcaagcgcagtgggccgctctcgaacagctggcggccgtgaggaaaactcgtctggag
gaggcctgtagtcttcaccagttccaggcggacgccgacgacgtggacgcctggaccctg
gacgctctccgaattgtctccagcgccgacgtgggccacgacgagttctccactcaagct
ttggtgaagaaacacaaagacgcttctgccgaggtcgccagttaccggccggtgatcgac
gctcttcacgaacaggcgcagacccttcctcccgaacaggtgcaggccgctaacgtcaac
gaacggctggcgggcatcgaggagcgctataaggaggtggccgagctgacgcggctgagg
aaacaagccctgcaggacgctctggcgctgtataagatgttcagcgaggcagacgcctgt
gaactttggatcgatgagaaggaacagtggctgaacagcatggagatcccagagaaactt
gaggacctcgaggtcattcagcacagatttgaaagtcttgagccagaaatgaacaaccag
gcatctcgtgttgcagtggtgaatcagatcgcccgacagctcatccacaacggacatccc
agtgaaaaagacattaaagcccaacaagataaactcaacaccaggtggagtcagttccgt
gatctcgtggatcagaagaaagaatccctgaactcggccctgggtgtgcaaaactatcac
cttgactgtaacgagaccaaatcctggatccgtgagaagacgaaagttatcgagtccact
caggagctgggcaatgacctgacgggtgtaatggctctccaacgcaagctcacgggcatg
gagcgagatctggccgccatcgacgccaagctgggtgacctccgcagcgaggctgaccgc
ctgtccaccgaacatcccgaccaggccaaagccatcaccggacgactgtcagagatcaac
gcggtgtgggaggagatgaaagaaacgcttcgtaaccgagaagaatctcttggcgaagcc
agcaagctgcagcagtttctcagggaacttgacgatttccagtcctggctttccaaaacg
cagacggccatcgcctccgaggacatgcccaacacgctggccgaggccgagaagctgctg
ggccaacacgagggcattaagaacgagatcaacaactatgaagaagactatcagaagatg
agagatatgggtgagatggtgacccagggtcagacggacgctcagtatatgttcctgaga
cagagacttcaggccttggatacgggctggaatgagctgcataagatgtgggagaaccgt
cagaacctcctgtctcagtctcacgcctatcagatcttcctgagggacaccaaacaggct
gaagcgttcctcaacaaccaggagtacgtgctggcacacaccgagatgcccaccactctt
gaaggagctgaagctgccattaagaaacaggaggacttcatgaccaccatggacgccaat
gaggagaagatcaatagtgtggtggaggctggacggagactgaccagtgaaggaaacatc
aatgctgaacgcatccaggagagagcgacgtcaatcgatgaacgacataagaagaaccgt
gaggccgctgttgagctcctgatgaggttgaaggacaacagagaccttcagaagttccta
caggattgtcaggagctcaccctgtggataaatgagaagatgttgacagctcaggacatg
acgtacgatgaagctcgtaacctccacagtaaatggctgaaacatcaagctttcatggca
gaacttcagtccaacaaagagtggctggacaaaatccagaaggatggaaagcagctggtg
tcagagaaacctgaaacagaagccatagtaaaggagaagttatcaggtcttcagacgatg
tggactgaactggagtccaccacccagactaaagctcagtgtctgtttgacgccaacaaa
gccgaactcttcacacagagctgcgccgacctcgacaaatggctgggtggcctggagggt
caaattcaatctgacgattacggcaaagatctgaccagcgtcaacatcctactgaagaaa
caacagatgttggagaaccaggtggaggtgcgtcagagggaggtggaggagcttcagtct
caagctcacgtgctgagacaggagggtaaagacacggacgaggtggacggacgcaggaag
gaggtggagcagaagttccagctgcttctggatcctctgataaagagaaagaacttcctc
atggcttctcgtgaaatccaccagttcaaccgtgatgttgaagatgaaattctttgggtt
gaagagagaatgccgctggccacatcaaccgatcacggcaacaatttacagactgttcag
ctacttatcaagaagaaccagaccctacagaaagagatccagggtcaccagccacgctgc
gatgacatattcgagcgcagccagagcatgctgaaggccgaaagtccgaacgtggaagcg
atccgaacgcgtctggacgacctacagcagctctggactctgatcatgcaggagacggag
aaacgacacagccggctggaggaggcacacaaagcccaacagtattattttgatgcggca
gaagctgaagcctggatgagcgagcaggagctttacatgatgtctgaggagaaggcaaag
gatgagcagagttcagtggccatgttgaagaaacaccagatcctggagcaggcggtggag
gattacgcagagactgtacatcaattatccaaaaccagtcgaggactagtggccgctaac
caccccgagagtgagaggatcggcatgcgtcagtcacaggtggataagttgtacgctgga
ttgaaggacctatcggaagagaggagaggaaaactggaggagagattccgtctcttccag
ctgaaccgggaggtggatgacctggagcagtggatcgctgagagagaggtcgtggctgga
tctcatgaactgggacaagattatgaacatgttactatgctacaggaacgtttccgtgaa
ttcgcccgagacacaggaaacatcggacaggagcgcgtagacggcgtaaaccgcatggcc
gatgacctcatcaatgccggtcacgccgacgcagccacggtcgccgagtggaaggacggt
ttgaacgaggcttgggcggacctgctggaactcatcgacacgcgtacgcagattctcgcc
gcatcctacgagctgcacaaattctaccacgacgcgaaggaaattttgggacgcatcctg
gacaaacataagaagcttccagaagagctgggccgagaccagaacacggtggagaccctg
cagcggatgcacaccaccttcgagcacgacattcaagcgcttgggacgcaggtaaaacag
ctgcaggaagatgctgtacgtctgcagtcagcgtatgcaggagacaaagctgatgacatt
cagaggcgagagggtgaagtcctggaggcttggcgcagtcttctggaggcctgtgagggt
cgacgcgctcgactgctcgacaccggagacaaattccgcttcttcagcatggtgcgtgac
ctcatgctctggatggaggacgtcatccgtctcatcgagactcaggagaagcccagggat
gtgtcctctgtggagcttctcatgaacaaccatcagggcatcaaagctgaaatcgatgcc
cgtaatgacagtttcaccgcatgcatcgagctgggaaaatcactcctggcacgcaaacac
tacgcatcagaggagattaaagaaaagttgctacagttgacggacaagagaaaagatatg
attgacaagtgggaggacagatgggagtggttaagactgattttggaagtgcaccagttt
tcacgggatgcgggcgtggcagaggcgtggctgctgggtcaggagccgtacctgtccagc
agagagatgggccaatgcgtagacgaggtggagaaactgatcaaacgacacgaagcgttc
gagaaatcggctgcaacctgggaggaacgtttctcagcgctggaacgactgactacgttg
gagttattggaagtgagaagacagcaagaggaagaggagagaaggaggaagccacccaca
ccagaacctgcagagacgcaggacgcagacgcacagcaacgggacggagagcagatcgct
cagaatggactcccatcagaccaggaatcaccacgggatggagtggatggagagatgaac
ggagtgcctgagagaagctcaaaggaggggagtccgaccccatcgctgaccaaagagaga
gcagtcaaaggaagccaatccgccacgctgccgactaaaggacaggattcaccgactgcg
cagctggaaggaattttacatcgcaaacatgaatgggaggctcataacaagaaagcatcc
aacagatcttggcataacgtgtattgtgtcatcaacaatcatgagatgggcttctataaa
gacaataagacagcaggtcagggcatcccgtaccacaacgagattcccgtcagtctgaaa
gaggccgtctgtgagatcgctgtcgactataagaagaagaagcacgttttcaagctgaaa
attacagatggaaatgaatatctcttccaagccaaagatgatgaggagatgaacacatgg
attcaggccattcagaacgcaggcagcgcctcttcatcctccgagaaatcagagatcacg
cctagcaaccagagcactcccgtctccagccgcgcccaaacgctcccggcgacggtcacc
atgacgaccgagtccagccccggcaagcgcgagaaagacaaagagaaggacaaagagaaa
cgcttcagcctgttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
