Paramisgurnus dabryanus (large-scale loach): 135740767
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Entry
135740767 CDS
T10799
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135740767 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135740767 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135740767 (pcdh20)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135740767 (pcdh20)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Protocadherins
135740767 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
FAM176
Motif
Other DBs
NCBI-GeneID:
135740767
NCBI-ProteinID:
XP_065115367
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All DBs
Position
14:complement(2342151..2346083)
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AA seq
883 aa
AA seq
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MWNTKHRSCRYSRGGLWGLFILLLYTNRLSCSSNFSHRIYKIKEGLPEGTLIGAIGADLN
LDLSVDPPRSFNLEQKTTGQQFVNLNNTTGKLYTSAVEIDRESLCAESHDGQGCSIFLDV
LILPQQYFQLVKIQIVIEDVNDNTPHFPVNEIRLTVPENAPVNARFAVEQSAVDPDVGIH
GVQTYWLVNDFGVFTLDVEENEGGELTPFLIITEALDRERKAEYVTEIIAEDGGSPPLLG
TAALRIIVTDVNDNCPKFTESQVNVTLYGNATKGMQLARLQAYDPDEGGNAQITYAFSDR
VSLESRSLFHLDKTTGVLKLAGKIDNNTGKLYKLNVLANGPTCIPEVATVTVRVIKELSG
PPVVVPRYIASEKDGVVSLSESEPAFSPIAFFTIKNTDPRQSVECLLERTGPFRLVPYER
LKNEYLLETTEPLDYEQQQDYEMTIVVRTFHGLTVKTVVKVHVLDVNDNAPVFKQSLVEV
SVEENNPPNTFLAQFQAADADSDSRGEVYYVLGVDAPTIFHLDRSTGVLTVSTSLDREEK
ELYRFTVRAVDRGAPRKESIATVIITVLDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGKNGWVALSIINGSDIFVIDTGRGALRAKTPLDREQQGTYYIWIEAVDGGEPAL
SCVTMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPSTLPGTSITEVYAVDRDTGMNAVIAY
SIVKRTDGEPGSFDIDPFTGNITLKKTLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRGADIDREEIPPVKEGREGERVPIQCSEYQALLLSLTATCLGLFLTV
VSLVTYICCKKVRKPKKKRLDVEIPLKLNHEMLDKNPMEISHI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaacacagaagctgccgctacagcagaggaggattatggggcttgttt
attctcctcctttataccaatcgactttcttgctcttcaaatttcagtcaccgtatctat
aagatcaaagaaggattacccgaaggcacactcataggggctattggtgccgatttaaac
ctggatctctctgtagaccctcctcgatcattcaatctggagcaaaagacgaccggccag
cagtttgtgaatctgaataacaccacaggaaagctgtacacatctgccgtcgagatcgac
agagagtctctgtgtgccgagtcccacgatggccagggctgctcaatctttctggatgtg
ttaattctccctcagcagtactttcagctggttaagattcaaatcgtcatcgaggacgtc
aatgacaacacgccacatttccctgtaaatgaaatcagattgaccgtgccagagaatgca
ccggttaacgccagatttgccgtggagcagtcggcagtggatcctgacgtgggcattcat
ggcgtccagacgtactggctggttaatgactttggggtttttactttagacgtggaggag
aacgaaggaggcgaactgacgcccttccttatcatcaccgaagctctagatagggagagg
aaagccgagtacgtgactgagatcatagccgaggacgggggctccccgccgcttctaggc
accgccgctctaaggattatcgtcaccgacgtcaatgacaactgccccaagttcacagag
tcacaagtgaacgttactctttatgggaacgccactaagggcatgcaactggctcgtctc
caagcttatgatccagatgaggggggcaacgctcagatcacgtatgcgttcagtgatcgg
gtcagcctagaaagcagaagcttgtttcatttggataaaactactggggtccttaaacta
gcgggtaaaatagacaacaacacaggaaagctctacaagctaaacgtattagctaacggt
ccgacgtgcattccggaagttgcgacagttacggttcgcgtaatcaaagagctctccgga
ccaccggttgttgtaccgcggtatatcgcctctgagaaggacggcgttgttagcctaagt
gaatcggagcctgcattttcacccattgcatttttcaccatcaagaacacagacccgcgg
cagagcgtagagtgtcttttggagaggacaggtccgtttagactcgtaccctatgagcgt
ttaaaaaacgagtacctgcttgagaccaccgaacctctggattacgagcagcagcaggat
tacgaaatgaccatcgtggtccgcaccttccacggattaacagttaagaccgtagtgaag
gtccacgtgttggatgttaatgacaacgctccggttttcaagcagtcgctcgtcgaggtc
tctgttgaggagaacaaccctccgaatacgttcctcgcccagtttcaggccgccgatgcg
gacagcgacagcagaggtgaggtgtattacgtactcggtgtcgacgctcctacgattttc
cacctggacaggtcgactggagtgttgactgtttccacctctcttgaccgggaggaaaag
gaattgtacagattcacggtgcgtgcggtagatcgcggtgcgccaagaaaagagtccatc
gccaccgtgataatcaccgtcctggatcgtaacgacaacagtcctcgtttcatcaataag
gattttactttctttgtgccagaaaactttccaggcttcggggaaatcggggtgctcacc
gttacggatgcagatgcaggaaagaacggttgggtggcgctgtccatcattaacggtagc
gacatcttcgtgattgacacaggtcgaggggcgttaagggccaaaaccccgctcgatagg
gagcagcaaggaacttactacatctggatcgaggccgtcgacggaggtgaacccgccctc
tcttgtgtcacaatggttaccgttctcctcctggacgtcaatgacaaccctccgaccgtt
ctgttcccccagtctaaccagtcctacatgctggtgcttcccagcacgctcccaggaacg
tctataacggaggtctacgccgtggatcgggacacgggaatgaacgccgttatcgcttac
agtatcgtcaagaggacggatggagagccggggtcgtttgacatcgacccgttcacgggt
aacataaccctgaagaaaaccctgagtaatcgaggtctgtacagtttgtgggtcaaagtt
agagaccacggtcagccggagctctactccacggtactggtcaacctctttgtgaatgag
acagtgagcaatgaaactcttattcagagcctgttgccccggggagcagatatcgatcgt
gaggagatccctccggttaaagaagggagggagggggaacgagtgccaattcaatgcagc
gagtaccaggcgctcctgctctccttgacggctacttgcctgggactctttctgaccgtc
gtgtcactggttacgtacatttgctgtaaaaaggtgagaaaaccaaaaaagaaacgatta
gacgtcgagattcctttaaaactgaaccacgagatgctggataaaaacccaatggagatt
tcacacatatga
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