Paramisgurnus dabryanus (large-scale loach): 135740784
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Entry
135740784 CDS
T10799
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03030
DNA replication
pdab03410
Base excision repair
pdab03420
Nucleotide excision repair
pdab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135740784 (rfc4)
03410 Base excision repair
135740784 (rfc4)
03420 Nucleotide excision repair
135740784 (rfc4)
03430 Mismatch repair
135740784 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdab03032
]
135740784 (rfc4)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135740784 (rfc4)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135740784 (rfc4)
DNA replication proteins [BR:
pdab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135740784 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
135740784 (rfc4)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135740784 (rfc4)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135740784 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
135740784 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_11
AAA_22
AAA_30
SLFN-g3_helicase
Mg_chelatase
DUF815
AAA_5
AAA_14
AAA_28
AAA_24
RuvB_N
Gp44_lid
AAA_19
ResIII
Kinesin
AAA_7
MalM_C
AAA_3
Motif
Other DBs
NCBI-GeneID:
135740784
NCBI-ProteinID:
XP_065115383
LinkDB
All DBs
Position
14:2173407..2178076
Genome browser
AA seq
364 aa
AA seq
DB search
MKRISGGDMQAFLKGASSQSVKAQKPSSSSGGEKKQRAVPWVEKYRPKCVDEVAFQEEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVV
REKVKNFAQLTVAGTRPDGKSCPPFKIIILDEADSMTSAAQAALRRTMEKESRTTRFCLI
CNYVSRIIEPLTSRCSKFRFKPLADNIQRERLLEICEKENLKYSKEGIEALVHVSEGDLR
KAITYLQSAARLNSEREITEKIIIEIAGVVPPKVIENVLQICYKGHFEKLELAVKDLIDQ
GYAGTNILNQLHEVIIEEKLNDKQKSVITEKMAEVDKCLTDGADEYLQLLSLCSVIMQQA
VQNT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatctcaggaggagatatgcaggcgtttttaaaaggtgcttcatcacagagt
gttaaagctcaaaaaccatcatcttcatcaggtggagagaagaaacagagagctgtgccc
tgggtggagaaatatagacccaagtgtgtggatgaagttgcctttcaagaggaggtggtg
gcagtactgaagaaatctctagagggcgctgaccttcccaacctgctgttttatggccct
cctggaaccggaaagacctccacgatcctcgccgctgcaagagaactctatggacccgag
ctgtaccgacaaagagttctggagcttaatgcgtctgatgagcgaggcattcaggtggtg
cgtgagaaggtgaaaaactttgcccagctgacggtggcgggcacgaggccagatggaaag
tcttgtccaccatttaaaataatcatccttgatgaggcggattcgatgacttctgctgct
caggcggctctcagacgcaccatggagaaagagtctcggaccacacgattctgcctcatc
tgtaactacgtcagcagaatcattgagccgttgacttcaagatgctccaagtttcgcttt
aaacctttggccgataacattcaacgggaacgtctgctagagatctgtgaaaaagaaaat
ctcaagtacagcaaagagggaattgaagctctggtgcacgtatcagaaggtgatctcagg
aaagccatcacatatctccaaagtgctgcgagactcaactctgagcgggaaattactgaa
aaaatcatcatcgagatcgcaggggtggttccgcctaaagtgattgaaaacgtattgcag
atctgttacaaaggccattttgaaaagctggagcttgcagtaaaggatttaattgatcag
ggttacgctggaacaaatattcttaaccagttacatgaagtcatcatcgaagagaagctg
aatgataagcagaaatctgtgatcacagagaaaatggctgaggtggataaatgtctgact
gatggtgcagatgagtatctacagttactgagtctctgctcggttattatgcagcaggcc
gtacagaacacataa
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