Paramisgurnus dabryanus (large-scale loach): 135741004
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Entry
135741004 CDS
T10799
Symbol
capn2l
Name
(RefSeq) calpain 2, (m/II) large subunit, like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04141
Protein processing in endoplasmic reticulum
pdab04210
Apoptosis
pdab04217
Necroptosis
pdab04218
Cellular senescence
pdab04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135741004 (capn2l)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135741004 (capn2l)
04217 Necroptosis
135741004 (capn2l)
04218 Cellular senescence
135741004 (capn2l)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135741004 (capn2l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135741004 (capn2l)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
135741004 (capn2l)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C2: calpain family
135741004 (capn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
NRDD
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
135741004
NCBI-ProteinID:
XP_065115681
LinkDB
All DBs
Position
24:25161682..25178455
Genome browser
AA seq
700 aa
AA seq
DB search
MSGIAATLQQNRARAAGIGTNANAVKFLNQDYEALKRECVESGRLYQDDAFEAIPAALGF
KELGPNSPKVRGVKWLRPTELTSSPTFISGGASRTDICQGALGDCWLLAAIASLTLNQDV
FARVVPSGQSFDCDYAGIFHFQFWQFGDWVDVVIDDRLPTRNGELLFVHSAEGSEFWSAL
LEKAYAKLNGCYEALSGGSTTEGFEDFTGGIAEAHELAKANPNLFKTIQKALSWGSLLGC
SIDITSSADSEAITKQKLVKGHAYSVTGAEEVDCRGQLTKIIRIRNPWGQVEWTGPWSDG
SSEWSNISDSDRERLCCKAEDGEFWMSFSDFLSNYSRVEICNLTPDALSDDTINKWALSK
FDGNWRRGSTAGGCRNYPASFWMNPQFLIKLEEQDDDPTDNETGCSFVVGLIQKNRRKMR
KMGEDMHTVGFAIYEVPPEFVGQRNVHLDRNFFVRNASAARSETFVNLREVCSRFCLPPG
EYLIVPSTFEPNMDGDFCVRVFSEKQAEFQQLDDPNEFKGSEIEINESDIDSRFRNLFGQ
LSGADKEISPFELRTILNKVISKRQDIKTDGFSLDTCRNMVNLLDKDGTGKLGLVEFKIL
WTKVETYLDIFCKNDKDRSGTMSSMELREAIEKSGFSLNNALHQVLVARYSEPDLTIDFD
NFVSCLMRLESMFKIFKVLDKDKNGTVELNMLEWLNLSML
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatcgcggctacgctccaacagaaccgggcacgggcggcgggaatcggtacc
aacgcgaacgcggtgaaattcctgaatcaggattatgaagctctgaagcgcgagtgtgtg
gagagcggaagattgtatcaagacgacgcgtttgaagcaattccagccgcgctcggattt
aaggaactgggaccaaattcacccaaagtgcgcggggttaaatggctcagacctacggaa
ttgacatccagtccaacgtttattagtggaggagcgagcaggaccgacatctgtcagggt
gcattgggtgactgttggcttctagcggccattgcatctttaaccctgaatcaggacgtg
tttgctcgtgtggtgccgtctggtcagagttttgattgtgattatgcaggaatatttcat
ttccagttctggcagtttggtgattgggtggatgtcgtcattgatgaccgtctgcccacc
aggaacggcgagttgctttttgttcactcggctgaaggttcagagttctggagcgctctc
ctggaaaaagcttacgcaaagctgaatggctgttatgaagctctctccggtggatccacc
acagagggttttgaggattttacgggaggcatcgccgaggcccatgaactagcaaaagcc
aatccaaacctctttaaaaccatccaaaaggctctgagctggggatcactgcttggctgc
tcgatagatatcaccagctcggctgactcggaggcgataaccaaacagaagcttgttaaa
ggacacgcctactctgtaacaggagctgaagaggtggactgcaggggtcaactaaccaag
ataattcggattagaaacccctggggtcaggtggaatggaccggcccctggagtgatggg
tcatcagaatggagtaacatcagcgatagtgaccgagagagactgtgctgtaaagcagaa
gatggagagttctggatgtctttctcagattttctgagtaattactcacgggtggagatc
tgtaacctgacacctgatgctctgtcagatgacaccattaataagtgggcgctttctaag
tttgacggtaactggagaagaggatccaccgctggtggctgcaggaactatccagcctcg
ttctggatgaaccctcagtttttaatcaaactggaggaacaggacgatgacccgaccgat
aatgaaactgggtgcagcttcgtcgtgggtctgatccagaagaaccgccgtaaaatgaga
aagatgggagaagacatgcacacagtaggctttgccatctatgaggtgccaccagagttt
gtcggtcagaggaacgtccatctggatcgtaatttcttcgtgaggaacgcttcagctgct
cgctccgagaccttcgtcaacctacgagaagtctgctctcgattctgtcttcctcctgga
gagtacctcatcgtaccctccacttttgaacccaatatggatggagacttctgcgtccgt
gtgttctccgagaagcaggcggagttccaacagcttgatgaccctaatgaattcaaggga
tcagagatcgaaatcaacgagtctgacattgatagccgcttcagaaatctctttggacaa
ctatctggggcagacaaggaaatttctccctttgagctgagaactatcctgaacaaagtg
atatctaaacgtcaagacatcaaaaccgatggatttagtttggacacttgtcgcaacatg
gtgaatttactggataaagacggcactggaaaactaggcttggtggagtttaagattctc
tggaccaaagttgagacctatctggacatcttctgtaaaaatgacaaggatcgttcaggc
acaatgagctcgatggagttaagagaagccatagagaaatcaggcttttctctaaacaac
gctctacatcaggtactggtagctcgatacagtgagcccgatcttaccattgactttgac
aactttgtgagctgcctaatgcgtctggaatccatgttcaagatatttaaagtgctggat
aaagacaagaacggaaccgtagagctgaacatgttggagtggctgaacctgtccatgctt
tga
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