Paramisgurnus dabryanus (large-scale loach): 135741366
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Entry
135741366 CDS
T10799
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135741366 (rbm39b)
Spliceosome [BR:
pdab03041
]
Common components
Common spliceosomal components
General mRNP proteins
135741366 (rbm39b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RSRP
RRM_7
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
135741366
NCBI-ProteinID:
XP_065116088
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All DBs
Position
11:complement(23619979..23633372)
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AA seq
554 aa
AA seq
DB search
MADDFDVEAMLEAPYKKGESKSSSANGHEGDRKKKKRHSGSRSPVPDRRRSRSRERKKSR
ERRKSRSRERRRSRSKERRRSRSRSRDRPGRFRGRKSPFMGQKINGGSGGKIGPQQFIKH
SRKRSRSKSPFKKDKSPVSTSLKITKNMGQKISGGSGGKIGPQQFIQHRLPIDNLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVDTTSVPLA
IGLTGQRLLGVPIIVQVSQAEKNRAAALANSLQRGGIGPMRLYVGSLHFNITEDMLRGIF
EPFGKIEGIQLMMDNETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERS
DASSASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGMQIPAAAKHALQMSGSVAFGNA
PATATPPILPNPGMNQAMNLPTQPLATQCLQLSNMFNPQSEDEPGWDVEIQDDVIEECKK
HGGVVHIYVDKNSAEGNVYVKCPSIPVSMTVVSALHGRWFAGKMITAAYVPLPTYHNLFP
DSVTATQLLRPARR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgactttgatgttgaggccatgctggaagctccttataagaagggtgaaagc
aagagctctagcgccaatggccatgaaggtgatcgcaagaagaagaaaagacacagcggc
agtcgcagtccggtcccagaccgtcggaggagcagaagcagggaacgcaagaagagtcga
gaacgccgcaagagtcgcagtcgtgagcgcagacgatcgcggagcaaagaacgcagacga
tctcgctcgcgcagtcgggatcgccctggacgttttcgtggacgcaaaagcccctttatg
gggcagaaaataaacggtggttccggaggcaagattggcccacagcaattcatcaagcac
agccgcaagcgctcccgaagcaaaagcccttttaagaaagacaagagcccagtcagcact
tccctgaagattacaaaaaatatggggcagaaaataagcggtggttccggaggcaagatt
ggcccacagcaattcatccagcacaggctaccgatagataatctgaccccggaggaaaga
gatgcccgcacagtgttctgcatgcagctggctgccagaataagacccagagatcttgaa
gacttcttctcagcagttggaaaagtccgtgatgtaaggatgatctctgacagaaactct
cgaaggtcaaagggcatagcctacatcgagtttgtagacacaacctccgtaccactggcc
attggtctgacaggtcaacgccttctgggggtgcccatcatagtccaagtatcgcaggct
gagaagaacagagcagcagctttggccaatagcctacagaggggaggaattgggccgatg
cggctgtacgtgggctccttacatttcaatataacagaggatatgctcaggggcatcttt
gagcctttcggcaagattgaaggcatccagctgatgatggacaatgagacgggcaggtct
aaaggatacggcttcatatcatttgcagatgcagagtgtgctaaaaaagccctggagcag
ctaaatggttttgagctcgctgggcggcccatgaaggtgggtcatgtgaccgagcgctcc
gatgcctcctccgccagctccttcctggacaatgatgagctggagagaactggcattgac
ttgggcacaacgggccgccttcagctgatggcaagactggcagagggtacaggaatgcag
attcctgctgctgccaagcatgctttacagatgagtggcagtgtggcatttggaaatgct
ccagctactgccacacctcctattcttcctaatcctgggatgaatcaagccatgaatctc
ccgacccagccgctggccacacaatgcttacagctgtccaacatgttcaatccacagtcg
gaagatgaaccgggttgggatgtagagatacaggatgacgtcatcgaagagtgcaaaaaa
catggaggcgtcgttcacatatacgttgacaagaactctgctgaaggaaatgtttatgta
aagtgtcccagcatcccggtttcaatgactgttgtcagcgccttgcacgggcggtggttt
gcaggtaaaatgatcacagctgcctacgtgcctctccccacctaccataacctgtttcca
gactcggtcacagccacgcagctcctcagacccgcacgccggtga
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