Paramisgurnus dabryanus (large-scale loach): 135741786
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Entry
135741786 CDS
T10799
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135741786 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135741786 (exosc8)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135741786 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135741786
NCBI-ProteinID:
XP_065116581
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All DBs
Position
10:complement(8627233..8630560)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRSDGRDLGEFRPTTLNINSINTADGSAMVKIGNTTVMC
GIKAELAMPSSDSPNKGYIVPNVDLPPLCSSKFRPGPPGEQAQAASQFMADVIESSDLIN
MEELCIEKGKLCWVLYCDIMCLDYDGNLLDSCIIALLAALKNAKLPEVTINKETDLAEVD
IQTKKHLKINRHPFGSSFAVFDDTISIVDPTAEEENLSTALLTVVTDEEDRLCAIHKPGG
TSLSAEKLQHCINRAVTRNKEIVKLLDKVTEIVKTSK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaaccgcagagccacttgaatatcacaggagctttttgaaagaa
aactgtcgttcagatggaagggatttgggagagtttagacccacaacgttaaacattaac
tccataaatactgcagatggatcagcaatggttaaaataggaaacacgacggtgatgtgc
gggattaaagctgaattagcaatgccctcttctgattctccaaataaaggatatatagtc
ccaaatgtagatctgccacctctgtgctcatctaaattcagacctgggccaccaggggaa
caagctcaggccgccagtcagtttatggctgatgtcattgagagttcagatttaataaac
atggaggaattgtgcattgaaaaaggaaagctttgttgggtgttgtattgtgatataatg
tgtttggattatgatgggaacttacttgacagctgcattatagctctgctggcagcttta
aagaacgcaaaactccctgaagtcacgataaacaaagagacagatttagcggaagttgac
atccagacaaagaaacatttgaagatcaaccggcacccttttggctcatcgtttgcagtt
tttgacgatactatcagtatagtagaccctacagccgaagaggaaaacttgtctacagcg
ttattgactgtagtaacagatgaagaggatcgactgtgtgccattcacaaaccaggtggg
acttctttatcagctgaaaaactgcagcactgcataaatcgcgccgtaaccagaaacaaa
gaaatcgtcaaactgctggacaaagtgaccgagatcgtaaagacgtccaaataa
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