Paramisgurnus dabryanus (large-scale loach): 135743116
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Entry
135743116 CDS
T10799
Symbol
msi2a
Name
(RefSeq) RNA-binding protein Musashi homolog 2a isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135743116 (msi2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135743116 (msi2a)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135743116 (msi2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
135743116
NCBI-ProteinID:
XP_065116746
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Position
10:complement(7199163..7396647)
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AA seq
410 aa
AA seq
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MEADASQVTSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRTQPKMVTRTKKIFVGGLSAS
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARSLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFSPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRETRERYGYMAYPQNAGPGFPDYGFYSGPGDQRGAP
CSFADYATLAPHAGQMLQSEHVTSTCNSPSQHHPSPDHFKSSGVYGANPPRPGGFPGANS
PGPVADLYGPSSQDSAVGNYISAASPQPGSGFNHSIAGPLIATAFTNGYH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgcgagtcaagtcacctccggaagcccgaacgattcgcaacacgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
ttcagtaaatttggggagatcagagaatgtatggtgatgcgcgaccccaccaccaaacgc
tccagaggctttgggttcatcacgtttgcagatgtttccagtgtagataaagtcttagct
caaccacaccacgaattagactccaagacgattgatcctaaggtcgccttccctcgacgc
actcaacctaagatggtcacaagaacaaagaagatatttgtgggtggattatcggcgagc
acagttgttgaagatgtgaaacagtattttgaacagttcggaaaggtagaagatgccatg
ctaatgtttgataaaactacaaacagacatagaggctttggcttcgtaacgttcgaaagt
gaagacattgtagagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaagcccagccgaaggaagtgatgtttcccccaggcacgaggggcagggcg
agaagtcttccctacaccatggacgccttcatgctgggcatgggcatgctgagttatcca
aacatcgtggcaacgtatggccgtggatacacaggattttctccaagctacagttatcag
tttccaggttttccagcgacggcatacgggccggtggcggcggcggctgtggcggcagcg
cgaggctcaggtagggagacccgggaaagatacggctacatggcgtacccacagaacgca
gggccagggttccctgattacggcttttattctgggcccggtgaccagcgcggggctccc
tgctcgtttgccgactatgccaccctggcaccccatgcgggtcagatgctgcaaagtgaa
cacgtcacctccacctgcaactctccctctcagcaccacccaagcccggaccactttaag
agctcaggtgtgtatggtgctaatcctcctcggcctggaggtttccccggtgccaacagt
ccgggacccgtggcggacctgtacggccccagcagtcaggactcagctgtgggaaattac
atcagtgctgccagccctcaaccgggctccgggttcaatcacagtattgcgggccctttg
attgcaactgcatttacaaatggataccactga
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