Paramisgurnus dabryanus (large-scale loach): 135743238
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Entry
135743238 CDS
T10799
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135743238 (cdh17)
Cell adhesion molecules [BR:
pdab04515
]
Cadherins
Major cadherins
135743238 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Syndecan
Motif
Other DBs
NCBI-GeneID:
135743238
NCBI-ProteinID:
XP_065116907
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Position
13:complement(17105499..17117697)
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AA seq
868 aa
AA seq
DB search
MSSPHLLLLAVLVSIAHGIGLEDKKGPLQNTVLDVPEATPVPFAIYKFISAVEGVSSYLV
KGETEEKINISPDGWLFLEQPLEWSPGKTHRLEIEALSADAELIDGPYVVNLQVVDVNNN
PPVFSESQYSGSVKEHSTAGKPFVQVFASDADNPDTPNARLRFSIEKQIPNPTNTRYFGI
NPESGEISITEEGKEFLMARPTLMYRRGEIQGSTDVLKKKFEDFCTPKSPMPLENNPFFT
CMQRSETRQVNLLRDPDYALIVRAEDMGGDAPNALSSSARVNIVINPNLWINPGQFRIKE
NSENEYPVFLGSVRANDPNAVYRLLQKERGHFPFTINDDGEIFVTGPLDREEKSMYILVV
MAENEQGVQLEEPMEIPVQVEDENDNSPVCAEAVFEVQENEPIGSVVGVLPVHDADEENT
LNSLLSFTLIKQSPVEPSSKMFSIDSLKGRIQVANSNLRRKEVPQFELVFNVTDGVHTTL
CKAIIKVIDTNNEIPIFEKNFYGTYSVPELAEVGTTVVTIKATDADDPGTGSSKVEYHIS
EGDPQNLFAISVDETTGEGTVYIAQPLDYEVKGSYRLQIDARNPEPLIEGVTYNDNSTSF
VVIELVDVDEPPVFEVEGLNVNIPENFTVGALIMKAEASDPEKKTIKFRMEGEDQGWLEL
NADSGELKTKAALDRETVEKLTIKIIAYETGGFKQESEMKVDINLQDVNDNYPKLQNTQG
FICVQKMTPITLTAEDKDNHPYGEPFSFSMPRKSPNWEIKAVDGTSANLILKKKPSSDQS
FSIPVNIKDNDGMGITQKFEVRVCNCTSLGYCYVEPEAHGGKMGMSGTVGILVGVFGFIV
LFLLIVLYRIKKKDKKKADSGVDTKPML
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtccacatttgctactcttggccgttctcgtcagcattgctcatgggataggt
ctggaagataagaaggggcctttacaaaatactgttttagatgtaccagaggctacaccg
gtgccatttgccatttataagtttatatcggcagtggaaggtgtttcttcatatttagta
aaaggagagacagaggaaaagatcaatatctctccagacggctggttatttctggaacaa
ccactggaatggagtcctgggaaaacccatcgcttagaaatcgaggcactgtcagcagat
gctgagctcattgatggaccttacgtggttaacttacaagtggtcgatgtcaacaacaat
cctcctgttttcagtgaaagtcagtacagtgggagcgttaaagagcattcaaccgcagga
aaacccttcgtgcaggtttttgcttcagatgcagataatcccgacacaccgaatgctcgt
ttgagattcagcattgaaaaacagatccccaatcccacaaacacgcgttacttcggcatc
aatccggaaagtggggagatctctatcacagaggaaggcaaagaatttctgatggcccgt
ccaaccttgatgtaccgccgtggggagatccagggcagtacagatgttttgaaaaagaaa
tttgaggatttctgcactccaaagagccccatgcctcttgagaacaacccctttttcaca
tgtatgcagcgctctgagacaagacaagtgaatcttcttcgggatccagattatgcacta
attgtacgtgcagaggatatgggaggtgatgcaccgaacgcacttagctcttcagcacgt
gtcaatattgttatcaatccaaacctatggatcaaccctggacaattccgtatcaaggaa
aattctgagaatgaatatccagtgtttttgggctcagtgcgtgccaatgatcctaatgca
gtgtacaggctgctccagaaagaaagaggtcatttccctttcacaatcaatgatgatgga
gaaatctttgttactggccctctggacagagaagagaaaagtatgtacatactggtggtg
atggcagagaatgaacagggtgttcagctggaagagcccatggaaattcctgtacaagtg
gaggatgagaatgataattcacctgtgtgtgctgaggctgtgtttgaggtgcaggagaac
gagccaattggtagcgtggttggggttctacctgtgcatgatgctgatgaagagaacacc
ctgaactccttactaagctttacactcattaaacaatcccccgtggagccatccagtaaa
atgttcagcattgattcactcaaaggcagaattcaagtagccaattcaaaccttaggaga
aaagaagttcctcagttcgagctcgtcttcaacgtgaccgatggagttcacaccacatta
tgtaaagcaatcatcaaggttatcgacaccaataatgagatccccatctttgagaaaaat
ttttacgggacctacagtgttcctgaactggctgaagtgggcaccactgtggtcaccatc
aaagccacggatgcagatgacccgggaacaggaagttctaaggtggagtatcacatcagt
gaaggagacccacaaaacctctttgctatttcagtggatgaaaccaccggagaaggcaca
gtctacattgctcagccactggattacgaggtcaagggttcctacagacttcagattgat
gcccgcaatccagagccgctgattgaaggagtgacatataatgacaattccacatcgttt
gttgtcattgagctggtggatgtggacgagcccccggtatttgaagtggagggactcaat
gtcaacattccagagaattttaccgtgggagccttaataatgaaggctgaagccagcgat
ccagaaaaaaagactatcaagtttaggatggaaggagaagatcagggctggttggagtta
aatgcagattctggagagttgaagactaaagccgctttggacagagagacagtggagaag
ctcacaatcaaaatcattgcttatgagacaggtggttttaagcaggagtctgagatgaag
gtggacattaacctgcaagatgtcaatgacaactaccccaaactgcaaaatactcagggt
ttcatctgtgtacagaagatgacccctattacactcactgctgaagataaagacaaccac
ccttatggagagccgttcagcttctccatgccccgcaagtcaccgaattgggagatcaaa
gctgtggatggaacttcagcaaatcttattctgaaaaagaaaccatcatctgatcagagc
ttctctattcctgtcaacatcaaggataatgatgggatgggcatcactcagaagtttgaa
gtacgtgtatgtaactgcactagtttgggctattgttacgttgagcccgaagctcatggt
gggaagatgggaatgtctggaactgttggaatactcgtaggagtcttcggcttcatagtt
cttttcctgctcatcgttctgtaccgaattaaaaagaaggacaagaagaaagcagatagt
ggtgtagatactaaacccatgctgtag
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