Paramisgurnus dabryanus (large-scale loach): 135743505
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Entry
135743505 CDS
T10799
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04510
Focal adhesion
pdab04512
ECM-receptor interaction
pdab04810
Regulation of actin cytoskeleton
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135743505 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135743505 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135743505 (itga10)
04810 Regulation of actin cytoskeleton
135743505 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135743505 (itga10)
Cell adhesion molecules [BR:
pdab04515
]
Integrins
Integrin alpha subunits
135743505 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
135743505
NCBI-ProteinID:
XP_065117330
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All DBs
Position
13:complement(21698373..21737464)
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AA seq
1171 aa
AA seq
DB search
MEIHKYLLFLKITVLLKGLCDCFNIDVKRPRIFSGPEDALFGFSVLQHDDRGEKSILVGA
PWDGPQNNRKGDIYKCIVEDEINSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPTASDGF
LACAPLWSQECGTSAFSTGICASVTNDMEPKDIIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTEDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDALTECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKFFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNSSAFLIEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESLAGRIMPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWKRLYVAGAPRFKHKGKVILFDLTPDGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
RKAQDARFGYAMAVAPDLNHDGYTDLLVGAPLEDDHQGALYIYHGHEYYIIPQYKQRIAG
SSLSTGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLRSRSIVQINVSLSFQPHSINV
IQKNCHKAGRDSACLNATVCFLAMSRSPGSHGTYFDMQVGAMLDDRKFSARALFDNNTQR
QTLMGVSGRVGQSMCYTLPFHVFDTADYIRPISFTLRFKVNDTENGPVLDEGWPTTVKKS
IPFFKDCGEDDVCVPDLSLKAHMDISGTRQQPFVIRSPRRRLAVEVQLQNSLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCTS
LISKVQMKLVAASDSKERSETLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFHTHFRVQNLGCYAVSNFDLSVHLPSVASGDRVFAAVVDAFSHNSSGVNCSIVSD
LAQLKSRQRDVRPLHPEDMKKSEVLNCSSSWCVEVVCNVQQLLKGQTALIRITRRIHDNF
FRQAKYKAVTIVGSYQLTARDSSLITLGDAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQMKDEDENTDS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagattcacaagtacctgctatttttgaagatcaccgttcttctcaaagggctgtgt
gactgttttaacattgatgtaaagaggccacggatctttagtggacctgaagatgctttg
ttcggcttctctgtgctacagcatgacgacagaggagagaaatcaattttggttggtgct
ccatgggatgggcctcagaataacaggaagggagatatttacaagtgcattgtggaagat
gagatcaattctaattgctcaaaagttaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatctaaagaattctcatctggggatgacgctgactcctactgcttcagatggcttc
ctggcatgtgctccactgtggtcacaggaatgtggtacatctgcattcagcactggaatt
tgtgcatctgtcaccaatgacatggagcccaaggacatcattgcacccactgctcaaaga
tgcaccacatatatggatatagtgattgttttagatgggtctaacagtatctatccttgg
tatgaggtgcagaacttccttagtaacatcctcagcaagttccacataagccctgaacag
atgcaggtaggtgtccttcagtatggagagatctcagtccacgagtggtctctcagggac
tatcagacaacagaggacgtggttgaagcagccaagaacatcagccgtcaggaggggcga
gagactcgcactgcctacgccatccaaatggcctgcacggaggccttcagtccagacaga
ggtgcacgggaaggtgccactaaagtgatgatagtcgtaactgatggagagtcccacgat
ggagaagatcttcccgatgctctcactgaatgtgagaaacgtaacatcaccagatacgcc
atagccgtattaggtcactacatccgcagacagcaggatccagagacctttatcaatgag
attaagtacatcgcgagcgacccagatgagaaattcttcttcaatgtgacggatgaggct
gcactgaatgacattgtagatgcattgggggatcgcatttttagtctggaggggacgctg
ggatacaattcaagtgcctttcttatagagatgtcccagattggtttttcaacgcacatt
ttggatgatggcatcttgttcggaatggtgggtgcttatgactgggagggaggggtccta
aaggagagcttagcgggacgaattatgccctcacgagaggcctttgagaaagagtttcct
ctggagctaaagaatcatgccgcttacctaggttacaccgtctcttcagtggtagttggt
gattggaaaaggttgtatgttgcaggagctcccagattcaaacacaaaggaaaagtgatt
ttgtttgatcttactcctgatggcgatgttataatcacacaggcactaaatggagaacag
attggctcatattttggcagcgaggtgtgcgtggtggacgtagatcaagatggaataaca
gatatcctgctcatagctgctcccatgttcctcggtgcgggaaacaaagaaacaggcaaa
gtctatgtctactgtctggatggggatggttttgcacctaacggtacgctgcattctcag
cgtaaggcgcaggatgctcggttcggatatgccatggctgtagcacctgatttgaatcat
gatgggtacactgacctgctggttggagctccactagaggatgaccaccagggagccctt
tacatctaccatggccacgaatattacatcataccgcagtacaaacaacgcattgctggt
tcctctctctctactgggctgcagtattttggccgtagcttgagtgccttgctggatctg
gatggagatgagttactggatcttgctgtgggagcgcagggcactgcagtcctgctgaga
tcacgcagtatagttcagatcaacgtcagtctgtccttccagccgcactccattaatgta
atccagaagaattgccacaaggctggccgagactctgcatgccttaatgccacggtctgc
ttcctggccatgtcccgctcgccgggctctcacggcacatattttgatatgcaagtggga
gccatgttagatgacagaaagttctcggctcgtgctctgtttgacaacaatacccagaga
cagacccttatgggtgtcagtggtcgtgttggacaatccatgtgctacacgctaccattt
catgtgtttgacacagctgattatattcgaccgatcagcttcactctgcgctttaaagtc
aatgatacagagaatggtccggttctggatgaaggctggccgaccacagtcaagaagtct
atcccattctttaaagactgtggagaggatgatgtatgtgtaccagatctgagtctgaag
gcccatatggacatttctggaacgaggcagcagccgtttgtgatacgcagcccgcggcgg
aggctggcagtagaagtgcagctacaaaacagtctggaaaacgcttacaacaccagtcta
actttacattactccaaaaacctgcacttcagcagcctgagcatccgggaagatgcccag
tttaagattgagtgcacagctttaagctcaaacagtcactcctgtaatgtgagttacccc
gtgtttcgctctcattctaaggtgaacttcatgctggagtttgagttcagctgtacatct
ctcatcagtaaggtccagatgaagcttgtagctgcaagtgacagcaaggagagatcagaa
acactgtcagacaacagcgttcagttgcagagtattgttcagtatgaacctgatctcttt
attacaagtgactccaacttaaaccgctatgaggttcacccgaccaggactgtgtcagag
gggacagggcctgagttccacacacatttcagggtgcaaaacttgggttgttacgcagtt
agtaacttcgatctaagtgttcatttgccctccgtggcttcgggggacagagtttttgca
gctgtggttgatgctttctctcacaattcctcaggagtgaactgcagtatagtcagtgat
cttgctcagctgaagtctaggcagcgagatgtacgtccacttcacccagaagacatgaag
aaaagtgaagtattgaactgcagttcatcgtggtgtgtggaggttgtgtgcaatgtgcag
cagttactgaaaggacagacggccctaatccgcatcacgagaagaattcatgacaacttc
ttcagacaggcaaagtataaagccgtgacaatagtgggctcgtaccagctgactgctcgg
gattccagtttgattacattgggggatgctgccctcttgagggagacagttttggaagta
ctgaaggggcgttcaatcccgatttcactctggattctgattggcagtattattggagga
ctactgcttctggcactcttagtattcatcctttggaagttgggctttttcacaaggaaa
cagatgaaagacgaggatgagaacactgacagctga
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