Paramisgurnus dabryanus (large-scale loach): 135743517
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Entry
135743517 CDS
T10799
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X2
KO
K08133
collagen type XIV alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pdab00535
]
135743517 (col14a1a)
Proteoglycans [BR:
pdab00535
]
Extracellular matrix (ECM) proteoglycans
Others
135743517 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
Fn3_VIN3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
135743517
NCBI-ProteinID:
XP_065117343
LinkDB
All DBs
Position
13:21840231..21983813
Genome browser
AA seq
1799 aa
AA seq
DB search
MQVSGLRIKLWCPLISLALIQCFAPASAQVQGPRRLRFKVLTAGKLLVTWKEPRGDYDGY
RFIYNSEPGGEASELPIARGENKAVIKDFNPKKEYSVKVIAVRGNQHSRALQGKYAEDQN
SDGEIIQPQVLKEDSLVEEANEISAVDQFVCTTSAIADIVILVDGSWSIGRINFRLVRMF
LENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGLA
LTYIQENSFKPESGARSDIPKIGILITDGKSQDDVLPSAQSLRDAGVELFAIGVKNADEN
ELRAIASKPEDTHVYNVADFSIMSTIVDGLTKTVCEGVELQDQEIKQNYFPEGTAFPPQD
LVTSEMTAHSFRVSWTLAPGNVEKYRVVYHPTGADVLEEIVVGGTENSVVLQNLNSLTEY
EIAVFAVYRSSASDALRGSEITLALPTVSDLQLYDVTDNSMRARWRDTEGASSYMILYAP
LSSDTVDERELKVDETVTDVELKGLIPDTEYTVTVYALFGEEASDPATAQETTISLRPPR
NLRVTEVDHSSVRLNWDAVSSKVKGYRVMYVKTDGVQTNEVVLGPVTNVYLENLSPVTEY
TVAVLAMYDAGQSDALSGRFTTKLVPAPFGLLTNEATSESFRVSWSHPARDVVLYKLSWS
PTTGGDQKEMMLNGAVDSYVIHDLSPFTEYKVSLSAVYKDEKESSAVVALENTLGWTTAV
PTTIYSTTEIVRLGVTALRVEDETPYSLQVSWEVLDSDVEQYKVTYVSPNRAEETVLVKG
TSRSVILQPLFSDTHYRITVTPVYDDEESTTLSMTSSGKTLPLSGPSNLRISEEWYNRFR
ITWDAPQFPTMGYRVIYQSDSVSGPALETFVGDDVNTLLILNLLSDTEYRIQVIASYTTG
SSQPLTGKGKTLFLGVNNLNTYKVHSTSMCAQWQPQRHASLYRVTIESVLNNEKEEVRLG
GGTSRHCFFNLYPNTPYKISVSTLLQDMEGPAVTTTATTSPVPTQPPTAAPTTIPPPTIP
PAKEVCKEARADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIAQFSDD
ARTEFKLNSYSDKESLLDAVQRINYKGGNTKTGRAIKHVKEAIFAEDAGVRRGIPKVLVV
LTDGRSQDDVNKISKEMQTEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFKK
IEEQLITFVCEAATATCPSVLMGGNTLAGFRMMEMFGLVEKHYSSVQGVSMEPGTFNSFP
CYRLHKDALVSQPTRYLHPEGLPSDYTITVLFRILPETPQEPFALWEILNKNNEPLVGII
LDNGGKTLTFFNHDYKGEFQTVAFEGTEIKKIFYGSFHKLHVAIGKTAAKVVIDCKTVGE
KPINAAGNITIDGVEVLGRLVRSRGRRDNSAPFQLQMFDIVCSTSWASRDKCCELPGLRV
EDDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLTDPAGLLHFVSAARLV
GPQGASGEIGPPGPQGPPGPQGPNGMSIQGPVGAPGEKGEKGETGLPGPQGVPGASGGPG
RDGPPGQRGLPGKDGPQGRQGLPGPMGSPGAPGAPGSSGPPGPMGDQGQSGPPGVKGDRG
ERGDIQSQAAVRAIARQVCEQLIQSHMSRYNSIMNQIPSQSVSVRTIQGPPGDPGRPGPQ
GQQGEQGPPGRPGFPGASGQNGRPGERGLSGEKGEKGSPGVGTQGPRGPPGPPGLPGEGR
TGSQGPPGRPGIQGTSGRPGTPGNPGPAGPPGYCDQNSCLGYNVGDDGRDNPSNSPMSP
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtccggattgaggattaagctgtggtgtccgcttatctctctggcactgatt
cagtgttttgctcctgcctcagctcaagttcaaggtccaagaagacttcgatttaaagtt
ctcactgcaggcaagctacttgtcacatggaaggaaccaaggggagattatgatggctac
agatttatttataatagtgaaccaggtggggaagcgagcgagttgccaatagcgagagga
gagaataaagctgtgataaaagattttaatcccaagaaggagtattcagtcaaagttata
gctgtgagaggaaaccaacacagcagagcacttcagggaaaatatgctgaagaccagaac
agtgatggagagatcattcaacctcaagtactcaaagaagacagtctagttgaagaggcc
aatgagatctcagcagtggaccagtttgtctgcacgacctccgccatcgcagatattgtc
atcctggttgacggctcttggagtattggacgaatcaatttccgtctggttcgcatgttt
ctggaaaacctggttaatgcctttgatgtgggaatagacaaaaccaggataggactggcc
cagtacagcggagatccaaggattgaatggcacttgaatggttttagcacaaaagatgca
gtgatagatgctgtgaaaaatctgccttacaagggaggaaacactctgactggtcttgct
cttacctacatccaggagaacagctttaaacctgagtctggagctcgtagcgacattccc
aaaattggcattcttataacagatgggaaatctcaggatgatgttctcccatctgctcag
agcctaagagatgctggagtcgagttatttgccattggtgtaaagaatgcagatgagaat
gaattgagggccatcgcctctaaaccagaggacacacatgtttataatgtggctgacttc
agtatcatgagcactatagtggacggtctgaccaagactgtatgtgagggagtggaacta
caagaccaagaaattaaacaaaattattttcctgaagggacagcgttcccaccccaggac
ctggtcacttctgagatgactgcgcacagtttccgtgtgtcctggactcttgcgcctggc
aatgtggaaaaatacagagtggtttaccatccaaccggagcagacgtgctggaagagatt
gtggtgggcggcaccgagaattcagtcgtcctgcagaatttaaactctctgaccgagtac
gagatcgccgtgttcgctgtataccgcagctcggcgagcgacgctctcagaggcagcgag
atcacactggcactacccacagtgagtgatctgcagttgtacgatgtgactgacaacagc
atgagagcccgctggagggacacagaaggggcttcgtcgtacatgatcctgtacgctcca
ctgagcagtgacactgtggatgaaagagagctcaaggtggacgagacagtgactgatgtg
gagctcaagggattgattccagacacagaatatacagttacagtctatgccctgtttgga
gaggaggcgagtgatccggcaaccgctcaggagaccaccatttctctgagacctccacgt
aacctgcgggtcactgaagtggatcacagttcggtgcgactcaactgggatgctgtttcc
agtaaggttaaaggctaccgtgtcatgtatgtcaagacagatggtgtccagaccaatgag
gtggtgttgggtcctgtcaccaatgtctacctggaaaatttgtctcccgtaactgagtac
accgttgcagttcttgccatgtatgatgctggccaatcagatgctctcagtggcagattc
actacaaagctcgtgccggctccattcggactgttgaccaatgaggccacctctgagagt
ttccgggtaagctggtcacaccctgccagggatgtagtgctgtataagttgtcctggtca
cccaccaccggaggagatcagaaggagatgatgctgaatggagctgtggactcatatgtg
atacatgacctgtccccttttactgagtataaggtgtcactatcagccgtctataaggat
gagaaagagagcagtgcagtggttgcgctagagaacacattgggctggaccacagcagtt
ccgaccaccatttactccacgacagaaattgttcgtttgggagtgactgccctgcgggtg
gaagacgagaccccctatagtctacaagtgagctgggaggtgctggactcagacgtggag
cagtacaaagtgacatatgtcagcccgaaccgcgcagaagagacagttttggtaaaagga
actagtaggagtgtgatcctgcaacctctcttttcggacacccactacagaatcacagtg
acccctgtgtatgatgatgaagagtccaccacgctttccatgacctcatccggcaaaaca
ctgccactatccggccccagcaacctcaggatctctgaagaatggtacaatcgcttccgc
atcacctgggatgctcctcaattccctactatgggttacagggtcatctaccagtccgac
tctgtatcaggtccagctttggagacatttgtaggtgatgatgtgaacaccctgctgatc
ctcaatctgttgagtgacacggagtaccgcattcaggtcatcgcctcatacaccacaggc
tccagccaacccctcaccggcaagggcaagacattgtttctgggggtcaacaatctcaac
acatacaaggtccacagtaccagcatgtgtgcccagtggcaaccacaacgtcacgcctct
ctctacagagttaccattgaatcagttctcaacaatgaaaaagaggaagtgaggcttggc
ggtggaacgtccagacattgttttttcaacctttacccaaacaccccttacaaaatcagc
gtctccacccttttacaggacatggagggacctgccgtcacaaccacagcaaccacttct
ccagtacccacccaaccaccgaccgcagcccccaccacaatccctcctcccaccatccca
ccagctaaagaagtttgcaaagaagccagggcagacctggcctttcttgtagatggctcc
tggagtatcggagatgacaactttcagaagattatccgctttctatacagcacaaccggc
gcgcttgacgtgattggtcccgagggaacacaggtggccattgctcagttcagtgacgat
gccaggactgagtttaagctgaactcctacagtgacaaggagtctttgctggacgctgtg
caacgcatcaactacaagggaggaaacaccaagacaggccgagccattaagcacgttaaa
gaggccatcttcgctgaggacgcaggagtaaggagaggcatccctaaagtcctggtggtg
ctcacagatggacgatctcaggacgatgtcaacaagatctctaaagaaatgcagacagaa
ggctacatcatctttgccattggctttgccgatgctgactatggggagctggtgaacatt
gccagcaaacccagcgagagacacgtgttcttcgtagatgacttggatgctttcaagaag
attgaagaacagctaataacttttgtttgcgaggcggcgacagccacttgcccatctgtg
ctaatgggtggaaacactttagcaggctttcgtatgatggagatgtttggtttggttgag
aagcactacagcagcgtacagggtgtttcaatggagcctggaacctttaacagcttcccc
tgctacaggttgcacaaggacgctctcgtctctcagcctaccaggtatcttcatcctgaa
gggcttccttctgactacacaataacagtgctctttcgcatactacccgaaactcctcag
gaaccctttgcattatgggaaatcctcaacaaaaacaatgagccactggttggcattatt
ctggataatggagggaaaacattaacctttttcaatcacgactacaagggagagtttcag
acggtggcttttgaaggaaccgaaattaagaagattttctatggcagtttccataagctt
catgtggccatcggcaaaactgctgccaaagtggtgatcgactgcaaaacagtaggagag
aaacccatcaatgctgcagggaacatcaccattgatggagtggaggttttgggacgtttg
gtccgctcgcgtggaagaagagacaactctgcaccgtttcagctccagatgtttgacata
gtctgcagtacatcatgggcgagtcgggataagtgctgtgaactcccaggcttgagagta
gaagacgattgtcctgccatgcctcacgcctgcacctgtgctcaggacagcaaaggacct
cccggaccctcaggacctccgggcggtcctggtataagaggttcaagaggagatcggggg
gaaccaggcttgacggaccctgcagggcttttacactttgtttcagcagctcggctggtg
ggacctcaaggggcttcgggtgagatcggacctccgggaccacaggggcctccaggtcct
caggggccaaatggaatgtccattcaggggccagtgggagctccaggagagaaaggagag
aaaggtgagactggtctgccaggtcctcagggtgtaccaggtgcaagtggaggacctggc
agagatggacctccaggacaaagagggctaccaggtaaagatggaccccaaggacgacaa
ggccttccaggaccaatgggaagccctggcgctcctggggccccgggatcaagtggacca
ccaggaccaatgggtgatcagggacagtctggtcctcccggtgtcaaaggtgatcgggga
gagagaggtgatatacagtctcaggcggcggttcgcgccattgcacggcaagtttgtgag
cagctaattcagagtcacatgtcccgctacaactcgattatgaaccagattcccagtcag
tctgtttcagtgcggacaatacaaggtcctccaggtgatcctggtcggccgggacctcag
gggcagcagggagagcagggcccacctggcagacccggatttccaggagctagtggacaa
aacggccgcccaggagaaagaggtctctcaggagaaaaaggagagaaaggcagtccaggg
gtagggacacagggtccccgtggtcccccaggacctccagggcttcccggagaaggtcgg
acaggcagtcagggtcctccagggaggcctggaattcagggtacctctggacgtccaggt
acacccggtaaccccggtcccgctggacctcccggctactgcgaccagaactcctgcctc
gggtacaatgttggagacgatggccgtgacaacccatctaattccccaatgtccccgtag
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