Paramisgurnus dabryanus (large-scale loach): 135743573
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Entry
135743573 CDS
T10799
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb isoform X1
KO
K22146
gasdermin-E
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
135743573 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdab02000
]
135743573 (gsdmeb)
Transporters [BR:
pdab02000
]
Other transporters
Pores ion channels [TC:
1
]
135743573 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
135743573
NCBI-ProteinID:
XP_065117424
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All DBs
Position
13:23847825..23859414
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AA seq
483 aa
AA seq
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MFAKATKSLVSEIDPDGCLIPVSRLNESDNLVPLALVIKRNRYWFWQKPKYLPTDFKLSD
VLVGDPINPAVVETEFMSFDGKVVDSKGGSVGADIGAGSINVGGKGSSKLQSSFGNLKKQ
EVDVQKLLQESRSRVVDLQHSLVQQIRKTQKEILTVVKERIITTQPCTVLEEQQTGGSCT
GMFGFSQKIKVSVNDKGKSVIDYDTNMSLNIPRNTIISYSVIELEISNTGHYELCLLPSV
QGGFEVDGPIKVQKAVQVCASPGKPSSKLQKDLEELQGQFKVLSKLPACTRSSLFQQISV
LLQNKAAISVLENAMLSVSQLEDICDETQPDPSQLDEVSAVRTTLELVKKAVAKDSTQTN
TSGQPQKPNALTATHLLVSSLEEMNDSTLLVLKSCCTYATLQALLRIVQNMALNKKSSLK
EDVLAVLADEKVFEKIKELFSSCKVTLRKEKDSLVTEISNPQDRLPLMLCIAAKGLASIA
PPA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagccacaaagagcctcgtgtctgagatcgaccctgatggttgtctgatt
cctgtgtctcgattgaatgagtcggacaatctggttcctcttgctcttgtcatcaaacgc
aaccggtactggttctggcagaaacccaagtacctgccaacagactttaaactgtctgat
gttctcgtcggagatcctataaatccagctgtggttgagacagagttcatgagctttgat
ggaaaagttgtggacagcaaaggtggaagtgttggagcagacatcggggcagggagcatt
aacgtaggggggaaaggctcgagcaaactccagtcgtcatttggaaaccttaaaaaacag
gaggtggatgtgcagaagctgttacaggagtccagatctagagttgtggatctgcagcac
tctctggtccagcagatacgaaagacacagaaagagatcctgacggtagtgaaggaacga
atcatcaccactcaaccctgcactgtccttgaagaacagcagactggtggttcctgtact
ggaatgtttggattcagtcaaaagataaaggtgtcagtaaatgacaaagggaagtctgtt
attgactatgacactaatatgtcgctcaacatccctcgaaataccatcatctcttacagt
gtgatcgagctggagatttctaatactggacactatgagctgtgcttgctgccaagtgtc
cagggtggttttgaggtcgatgggccaataaaggtacagaaagcagtccaggtctgtgct
tcaccgggaaaacccagcagcaaactgcagaaagacttggaagaactacagggtcagttt
aaggttctctctaaactccctgcctgcactcgatcttctctcttccagcagatctctgtg
ctcctgcagaataaagcagccatcagcgtgctggagaatgcaatgttgtctgtctctcag
ctagaggacatttgtgatgagacacagccggatcccagtcagttagatgaagtgtctgct
gtgcggaccacactggaactggtaaagaaagctgttgctaaagacagcacccaaacaaac
acctctggacagccccaaaaacccaacgctctcactgccacccacctgctcgtcagctct
ttagaagagatgaatgactccaccctacttgtgcttaaatcctgctgcacttatgcaacc
ctgcaagctcttcttcgtattgtgcaaaatatggctttaaataagaagtcttctttgaag
gaggatgtcctggctgttttagctgatgaaaaggttttcgagaaaatcaaggaactgttt
agttcctgtaaagtgaccctgcgaaaggaaaaagattcacttgtaactgaaatcagtaac
ccgcaggatcgcctccccctcatgctgtgcatcgctgccaaagggttggcatctatagcg
ccccctgcctga
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