Paramisgurnus dabryanus (large-scale loach): 135743706
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Entry
135743706 CDS
T10799
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
Brite
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135743706 (dhx38)
Spliceosome [BR:
pdab03041
]
Complex C
Other components
Step II factors
135743706 (dhx38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135743706
NCBI-ProteinID:
XP_065117552
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Position
Unknown
AA seq
1258 aa
AA seq
DB search
MEDDDASLHRLEGSDPTVQVGGLIVKKKSAATEQHVFRVPAPRTSLLGLDLLAAQKRKER
EGKEMLDDQPKKSKVSSFKDWEEGKSDSDSDDENQEDGDSKNVKKERKYRVTGSETPSNP
GGVSEEFKQRHQQREKDRREHGVYASSKEDKSRDRDRTRDRDQDRSRDREREKRRDRDER
ESSRGSGSSRSERGDGSARSERSQREFGSERLSRGGRRDEPESPRNRHKELATPSRSSWD
EDDSGYNSSRHSHWESPSPSPSHRESERSERSHRSVRDSERKDKSVRGQYPADTPLPTPS
YKYNEWANDRKHLGSTPRLSRGKGDKREDGDNGITFNDEDEKEQWEEDQRQADRDWYMMD
EGYDEFHNPLTSSSEEYVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVVQR
LEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDPTSDMAIISRKGSQL
VRRHREQKERKKAQHKHWELAGTKLGDIMGIKKKEDGGEGNAVGEDGTVDYRTEQKFADH
MKEKSEASSDFAKKKTLLEQRQYLPIFAVRQELLNIIRDNNIVIVVGETGSGKTTQLTQY
LHEDGYTGYGMVGCTQPRRVAAMSVAKRVSEEMNCNLGEEVGYAIRFEDCTSEKTVIKYM
TDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMD
SDKFASFFGNVPIFHIPGRTFPVDVLFSKTPQEDYVEAAVKQALQIHLSGMTGDILIFMP
GQEDIEVTSDQIVERLGDLDNAPPLAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIA
ETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTGPGQCYRL
YTQSAYKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLW
ILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSADILIVVSMLSVPSIFYRPK
GREEESDQVREKFSVPESDHLTYLNVYMQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQL
KDIMVQQKMNLISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALF
GMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKAE
ITSMEEEMSMAQEQIKARKEEQERKNNLGSVRAIKICTPGRKEEAPMTPKRTPARFGL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatgatgcgtccttgcatcggttagaaggcagtgacccgacggtgcaggtc
ggaggtctcattgtaaagaagaagagcgctgcaacagaacaacatgtgttcagggttcca
gctccacgcacttctctcctgggcttagatctgctggccgcccagaaacgtaaggaacgt
gagggcaaggaaatgctggatgatcagcccaaaaaatccaaggtgtcatcattcaaggat
tgggaggaagggaaaagtgattcagattctgatgatgaaaatcaggaggatggtgacagc
aagaatgtgaaaaaagaaaggaagtaccgtgtaactggttccgaaacgccctcaaacccg
ggaggggtaagtgaggagttcaaacagagacatcaacagagagagaaagacaggcgtgaa
cacggtgtttatgcatcttccaaagaagacaagagcagggacagagacaggacaagagac
agagatcaagatcgctcccgtgaccgagagagagagaaaagaagagaccgagacgaacgt
gaaagcagtcgagggtccggcagcagtcgctccgagcgtggtgatggcagcgcgaggagt
gagcgatcacagagggaatttggctcggagcgtctcagccgcggcgggcgtagagatgag
cctgaatctccacgtaacagacacaaagaattggccactccgtcgcggtccagctgggac
gaagatgatagtggttataacagctctcgccactcccattgggagagtccgtctccctcc
ccgtcccatcgagagagcgagcgctcggagcgcagtcatcgctcggtccgagacagcgag
aggaaggacaagtctgttagaggtcaatatccagcggatactcctttaccaactccttca
tacaaatacaacgagtgggctaatgacagaaaacatctgggctccactcctcgactgtct
cgagggaaaggagataaaagagaggatggtgacaatggcatcacatttaatgatgaggat
gagaaagaacagtgggaggaggatcagaggcaagcggatcgtgactggtatatgatggat
gagggttatgatgagtttcacaaccccttgacgtccagctcagaggagtatgtgaagaag
agagagcagatcctacaaaaacagacccagaaacgcatctcggcacagaaacgacagatc
aatgaggataatgaacgctgggagaccaaccgcatgcttaccagtggagtggtgcagcgt
ctggaggtggacgaagactttgaagaggacaatgctgccaaagtccacctgctcgtccat
aaccttgtgccacccttcctggatgggaggattgtcttcactaagcagcctgaaccggtc
attccagtgaaagatccgacctcagacatggccatcatctcccgcaagggcagtcagctg
gtccgacgccacagagagcagaaagagagaaaaaaggctcagcataaacactgggagctg
gctggcaccaaactgggcgacatcatgggcatcaagaaaaaagaggacggaggcgagggg
aacgctgtaggagaagatggaactgtggattacagaacggagcagaagtttgccgatcac
atgaaggagaagagtgaagcaagcagcgatttcgccaagaagaaaacactattggagcaa
agacaatatctgcccatatttgccgttcgccaggagctgctgaacatcatcagggataac
aacattgtgattgtggtgggggaaaccggcagcggtaagacgactcagttgacacagtat
cttcacgaagacggttacacgggttacggcatggtgggctgcacacagccacgccgagtg
gcagccatgagcgtggccaaaagagtcagtgaggaaatgaactgtaacctgggagaggag
gtgggttacgctatccgttttgaagactgtacatcagaaaagaccgtgataaaatacatg
acagatggtattctcctgagggaatctctgcgggaatcagatctggatcattacagtgcc
gtcatcatggacgaagctcatgaacgttccctcaacacggatgtgctgttcggtcttctc
cgagaggtggtgtctagacgctcagacttgaagctcattgtcacgtcagccaccatggac
tcggacaagtttgcgtcgttcttcggaaacgttcctatttttcacattcccggcaggacg
ttcccagtagacgtcctgttcagtaagactcctcaggaggactatgtggaggcagccgtg
aaacaggccctgcagattcatctcagcgggatgacgggtgacatcctcatcttcatgcct
ggtcaggaggacattgaggtgacatcagatcagattgtggagcgattgggggatctggac
aacgctcctcctttggcagtgctgcccatttactcccagctgccctctgacctgcaggcc
aagatctttcagaaggctccagatggagtgaggaaatgcatagttgctacgaacattgcc
gagacgtctttgacggtggatgggatcatgtttgtggttgattcaggttattgcaaacta
aaggtgtttaatccacgcattggcatggatgccctgcaggtgtaccccatcagtcaggcc
aatgccaaccagcgatcaggaagagctggcaggacaggcccagggcagtgttacaggttg
tatactcaaagtgcttataagaacgagatgctcacgaccactattccagagatccagagg
actaacctggccaacgttgtgctgctgctcaagtcgctaggagtgcaggaccttctgctc
tttcacttcatggatcctccgcctgaagacaacatgctgaactccatgtaccagctgtgg
atcctgggggcgcttgacaacactggcgctctgacgcccaccggacgtctcatggtggag
tttccgctggatccggctctgtctaagatgctgatcgtgtcatgtgacatgggctgcagc
gctgatatcctcatcgttgtttccatgttgtctgtaccatccatcttctacagaccaaag
ggtcgtgaggaggagagtgaccaggtgagagagaagttctctgtacctgagagcgatcac
ctgacttacctcaacgtttacatgcagtggaagaacaacaattactccagcatctggtgt
aacgatcacttcattcatactaaagccatgcgcaaggtgcgtgaggtcagagctcagctc
aaagacatcatggtgcaacagaaaatgaatctgatctcttgcggctcagactgggatgtg
atcagaaaatgcatctgtgctgcttacttccaccaagctgctaaattaaagggaataggg
gagtacgtgaacgtaagaaccggaatgccgtgccatctgcacccgaccagtgctctgttc
ggcatgggctacaccccagactacatcatctaccacgagctggtcatgactactaaggaa
tacatgcagtgtgtgacagcggtggatggtgaatggctggctgagctcgggccaatgttt
tacagcatcaaacacgcagggaagagcagacaggagaaccgacggagagccaaggcagag
atcaccagcatggaggaggagatgtctatggcacaagaacagatcaaagcacgcaaagag
gagcaggagaggaagaacaacctcggcagcgtcagggcaataaagatctgcaccccagga
cggaaagaggaagctcccatgacaccgaaacgaacacctgcacgattcggcttataa
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integrated database retrieval system
