KEGG   Paramisgurnus dabryanus (large-scale loach): 135744129
Entry
135744129         CDS       T10799                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04137  Mitophagy - animal
pdab04140  Autophagy - animal
pdab04144  Endocytosis
pdab04145  Phagosome
pdab04148  Efferocytosis
pdab05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    135744129
   04145 Phagosome
    135744129
   04140 Autophagy - animal
    135744129
   04137 Mitophagy - animal
    135744129
   04148 Efferocytosis
    135744129
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135744129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pdab04131]
    135744129
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdab04147]
    135744129
   04031 GTP-binding proteins [BR:pdab04031]
    135744129
Membrane trafficking [BR:pdab04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    135744129
Exosome [BR:pdab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135744129
  Exosomal proteins of other body fluids (saliva and urine)
   135744129
  Exosomal proteins of colorectal cancer cells
   135744129
  Exosomal proteins of bladder cancer cells
   135744129
GTP-binding proteins [BR:pdab04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    135744129
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 AAA_7 NTPase_1 AAA_22 AAA_16 DUF5992 Septin ATPase_2 AAA_24 SRPRB AAA_14 AAA_5 NB-ARC NACHT MCM DAP3
Other DBs
NCBI-GeneID: 135744129
NCBI-ProteinID: XP_065118174
LinkDB
Position
10:4409920..4415747
AA seq 205 aa
MSSRKKVLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMADDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNDIPYFETSAKEAINVDQAFQTIARNALKQEAEV
ETYDFPSQIKLRDDRPVSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcttctcgtaaaaaggttctcctgaaggtcatcattcttggggatactggtgttgga
aagacatcgctgatgaaccaatatgttaataagaaattcagcaatcagtataaagctacg
atcggtgcggactttcttaccaaggaggtgatggcggatgacaggctggtgacaatgcag
atttgggacacggcaggacaggagcggtttcagtctttgggcgtggcgttttatcgtggt
gcggactgttgcgtgctggtgtatgacgtgacagcgccaaacaccttcaaaaccctcgac
agctggagggatgagttcctcattcaggccagtccacgagacccagagaacttccccttt
gtagtgcttggtaacaagatcgatttggagaacagacaggtgacgacaaagcgagcacaa
gcatggtgtcagagcaaaaatgatattccttattttgagaccagtgcaaaggaggctatc
aacgtggaccaggctttccagaccatcgctcgcaatgccctcaaacaggaggctgaggtg
gagacgtacgacttcccgagtcaaattaaactgcgagacgacagacctgtgtcctccagc
gatggctgcagctgttga

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