Paramisgurnus dabryanus (large-scale loach): 135744476
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Entry
135744476 CDS
T10799
Symbol
valopb
Name
(RefSeq) vertebrate ancient long opsin b
KO
K04256
c-opsin
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135744476 (valopb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pdab04030
]
135744476 (valopb)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135744476 (valopb)
G protein-coupled receptors [BR:
pdab04030
]
Rhodopsin family
Vision
Opsin
135744476 (valopb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
FSAP_sig_propep
Motif
Other DBs
NCBI-GeneID:
135744476
NCBI-ProteinID:
XP_065118698
LinkDB
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Position
1:complement(50714964..50723611)
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AA seq
403 aa
AA seq
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MPALLAAMESFGSSVTESTDSITIKPHDPFSGPLKTVAPWNYTFLASLMFIVTSLSLTEN
FTVMLVTFRYKQLRKPLNYIIVNLSVADFLMSLIGGTISFLTNSRGYFFLGVWACVLEGF
AVTFFGIVALWSLAILAFERYFVICRPLKDVRLGGKHAAVGLIFVWTFSFIWTFPPVVGW
NSYTVSKIGTTCEPNWYSTDYYDHTYIITFFTTCFIIPLGVIIISYGKLMQKLKKVSNTH
GRLGNARKPDREVARMVIVMIIAFMVGWTPYAAFSIIVTAYPTIHIDPRMGSIPAFFSKT
AAVYNPVIYVFMNKQFRKCLMQMFKGNDTNLDSTNLNQTSDKGAITATVDTHLVEMSTIA
ARVPMSLCNLEKSEDDEEVEKPDQSGNGGPKQLPISENRVCPL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccttctcgctgccatggagtcgtttgggtcttcagtcaccgaatccaccgac
agcatcaccatcaaaccgcacgatcctttctctggtccactgaagactgttgcgccctgg
aattacactttcctcgcgtctctgatgttcatagtgacttcgctctctctgacagaaaac
tttaccgtgatgctcgttactttcagatacaaacagctgagaaagcctttgaattatatc
atcgtcaatttatccgtcgctgactttctaatgtcacttataggaggcaccataagtttt
ttaacgaattcacgagggtacttctttctgggcgtctgggcgtgtgtgctggagggattt
gccgtcactttttttggaattgtggctctgtggtctttagcaatcctggcattcgaacgt
tacttcgtgatctgtcggcctctgaaagacgtccgtttgggaggcaaacatgctgctgtg
ggtcttatttttgtatggaccttctccttcatatggacttttccaccagttgtcggctgg
aacagttatacagtcagcaaaatcggaaccacatgtgaacccaactggtactcgactgac
tactatgaccacacctatatcatcacctttttcaccacctgttttattattcctcttggc
gtgatcattatctcatatggaaaacttatgcagaaactcaaaaaggtatcgaacacacac
ggaaggctgggtaacgcacgtaagcctgaccgtgaggtggcacggatggtcatagtgatg
ataatagccttcatggttggatggacaccttatgcagcattctcaattattgtcacagcc
tatcccacaatccacattgatcctcgcatgggctctattccagccttcttttcaaagaca
gcagctgtttataatcccgtcatctatgtgttcatgaacaaacagttcaggaagtgtctg
atgcagatgtttaagggaaatgacaccaatctggactctactaatttgaatcagacatca
gataaaggggcgatcactgcaacagttgatactcaccttgtcgagatgtccaccattgct
gctcgcgttcccatgtccttatgcaatttggaaaagagtgaggatgatgaggaagtggag
aagccagatcaaagtgggaatggaggtccaaagcagctgcctatatctgaaaatagagtt
tgtcctttgtag
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