Paramisgurnus dabryanus (large-scale loach): 135744517
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Entry
135744517 CDS
T10799
Symbol
abca5
Name
(RefSeq) LOW QUALITY PROTEIN: cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135744517 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdab02000
]
135744517 (abca5)
Transporters [BR:
pdab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
135744517 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
nSTAND1
Motif
Other DBs
NCBI-GeneID:
135744517
NCBI-ProteinID:
XP_065118759
LinkDB
All DBs
Position
1:complement(43889363..43919157)
Genome browser
AA seq
1674 aa
AA seq
DB search
MYFIPVSDTCGSQLKNAXRMQPVSKRDAGVWHQTRSLLYKNLLIKWRTKQQSLQELILPL
LLLGLLILISMLNPHVSYGSIDTKELDHEHDLPIKGLGYTPISNVTNHIMEEVARELLVN
ELRLDMFSTEEDLENASLYEPNGYVGVVFLDSMSYRLRFPYSELPLPSDFTESITSCYTN
YRNCRAANYWYSGFIRLQSLIDAAIIQMQTKRSVGNELKVRAVMMGHPGSVEVQKFPHAL
ISIYLVVAFTPFVSFLIVNVAAEKEQRLKDTMGMMGLYDSAFWLSWGLLYAVLVTTMSIL
MAVIATCTPLFSNSNFFVIFLLIFLYGISSIFFSFMLTPLFKKPKFASTVGSTLTVVFSC
LSLFTVLMRDFPQPVVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLRDGPHALYVPM
VMLFLDCILYLLLAIYLDQVLPGEFGTRRSMMYFLQPSYWSKKRKHYVEVSSVFEGEVNG
APVIDESAETVSPEFRGKEVIRICNIRKVYKDKDITVEALRGLTFDIYEGQITALLGHSG
AGKSTLMNILCGICPATEGTATIYGSPVAEIAEGAEMKQLVGICPQFNIIFDVLTVQEHL
RIFAAIKGILPSDIDGEVRKVLKDLDLEKIMDAQAKNLSGGQKRKLSVAIAILGDPKILL
LDEPTAGMDPVSRHQVWTLLKSRKAGRVTVLSTHYMDEADILADRKAIISQGQLKCIGSS
LYLKTKCGVGYHLRMSVTEGCEVERVTSLVKQHVPKAQLSRQQEAELTFTLPFESMETFP
GLFAELDCRPDLGVTNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNHEKVEEEGDASSLD
DIDQRLLTFSDSRQDAVTARALWRQQFSTVAWLHMLNLQRERKAIIYNVTLYLVFLSGVL
ILSLATGNIQIHSPERLFSPIYLLHRNEAPRKYATSLLVQNSTDSDLSGFIRNVENQDIK
VEMMRKPDYMSSAPVSAAINVTGSSNDYTYILAFNSTTVHSLPMAVNVLSNALLGGFNGT
GRIKTWSKPFDYQIPDTTSYVLIYIESILLGMLAAGMSAYFAMDHTKDIELKCRSTLRIS
GLVPSAYWCGQAAIDVPFYYLILICMTSTLFAFHSTNLLTAHNVMVVALCVIGFSPAMVL
FTYCVSFLFVKVQSNRDFFSVVSMMICILSASIVQLALVNGDEGLAQILHNALCFLSPLY
PLMGCLTCITVATFLQSTHEVDFLWTNLFISVIAPYIQCILLLILLRWLEMTYGGKTMKN
DQLCRISSKTKDKVQKNPEENVSEDEDVQVEKARVKEALTCQCCEEKPVVVVSELRKQYK
GKREGFSLTKRRQVATKNVSFCVRKGEVLGLLGPNGAGKSTIMHLLSGDMEPTAGQILMG
DYGTDFQPTENPLEHVGYCPQVNPLWPRITLQEHLEIYAAIKGLHQHDIPNIIKRVVNAL
ELKDHLHKQAKNLSAGLKRKLCFALSMLGNPQIVLLDEPSTGMDPKSKQRMWRAIRAAFK
NKQRGALLTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGRGYSLEINLREELTG
LQQADLLHKEILKIFPHAARQDSFATLMVYKIPMEDVKSLAKAFSQLESAKQNFNFEEYN
FSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQDGSVSINHADSVVHQL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgtattttatccctgtgtctgatacatgtggcagtcagctgaagaatgctngaagaatg
cagcctgtaagtaaaagagatgctggagtttggcatcagacaagaagcctgctctacaaa
aacctgcttatcaaatggaggaccaaacaacaaagtcttcaggagctgatcctgcccttg
ctcctcttgggtcttcttatcctcatcagcatgctcaatcctcatgtgtcttatggcagt
atcgacaccaaagagctggatcatgaacatgacctgccaatcaaaggtctcggttacacc
cccatcagcaacgtcaccaatcacattatggaagaggttgcacgggaactgctcgtgaat
gagcttcggttggatatgttttctaccgaggaagatttggagaatgccagtctctatgaa
ccgaatggttatgtgggggtggtctttctggactccatgtcataccgtcttcggttccca
tacagtgaacttcctcttcctagtgatttcacagagtccataacaagttgttacacaaac
tatagaaactgccgtgccgccaactattggtactctgggttcatacgcctgcagtctttg
attgatgctgccatcatacagatgcaaaccaagcgttcagtggggaatgaattaaaggtg
cgtgctgtgatgatgggacatccgggttctgtggaggtccagaagttcccccatgccctc
atctccatttatttggtggtggcgtttacgcccttcgtctctttccttattgtcaatgtg
gccgctgaaaaagagcagagactcaaagacaccatgggcatgatgggattgtatgattct
gcattctggctttcgtggggtctcctctatgctgtgttggtgacgactatgtccattctt
atggctgttatagcaacctgcactccactcttctccaacagcaacttttttgtcatattc
ctgctcatctttttgtatggaatatcctctatttttttttccttcatgttgacgcccctg
tttaagaagcccaagtttgcgagtacggtgggctccacactgacggtggtcttcagctgt
ctgtctctctttaccgtgcttatgagagatttccctcagcctgtggtctggctcctctgc
cttctttctcccagcgcattctctattggaatcgcccaggtggtgtatttggaagctcag
ggtgatggggcagtgttctcctctttgcgcgatggtcctcatgccctctatgttccaatg
gtcatgctatttttggactgcattctctatctgcttttagccatttacttggaccaggtg
ctgccaggtgagtttggcacacggcgctcaatgatgtacttcctgcagccatcctattgg
tcaaagaaaaggaagcactatgtggaggtgagctctgtctttgaaggagaggtgaacgga
gctcctgtaattgatgagtcggcggagaccgtttctcctgagtttagaggcaaagaggtc
atcagaatctgcaatatccgtaaagtctacaaagataaagacatcacggtggaggcactg
agaggtttgacttttgacatctatgaaggtcagatcacagccctgctcggacacagtgga
gcgggaaaatccactctcatgaacattctttgtggcatttgccccgcaacagaaggcaca
gccaccatctatggctcccctgtggcggagatcgcggaaggagctgagatgaaacagctg
gttggtatatgcccccagttcaacatcatctttgatgttcttaccgtacaggaacacctg
aggatttttgcagccatcaaagggattctgccctctgatatcgacggcgaggtaaggaag
gttttaaaagatttggatttggaaaaaattatggatgcccaggcgaagaacctgagtgga
ggccagaagaggaaactgtcagtggcaatagcaattcttggtgacccgaagattcttctt
ctggatgagccgacagctggtatggacccagtgtctcgtcatcaggtttggacattactg
aagagccgtaaagcaggcagagttactgtactcagcactcattacatggatgaggcagat
atacttgcagatcgtaaagccatcatctctcaagggcagctaaaatgtattggctcatct
ttgtacctgaagaccaagtgtggagttggttatcatcttaggatgtcggtgactgaaggt
tgtgaggtggagagagtcacatcactggtcaagcagcatgttcccaaggcacagttgtca
cggcagcaggaggctgagctcacgttcacgttgcctttcgagagcatggaaactttccca
gggctttttgcagagctggactgtcggcctgacctaggtgtgacaaactatggtgtctcg
atgacaacattagaagatgtattcttgcgtctggaggcagaggcggaggtggatcaggcc
gactacagtgtgtttaaccatgagaaggtggaagaagaaggagatgcctcatctctggat
gatatagaccaaaggttgcttaccttctcagacagcagacaggatgcagttactgcccgt
gccctctggaggcagcaattcagcactgtggcctggttgcacatgcttaacctacagagg
gaaaggaaggccatcatatacaatgtcacgctatatctggttttcttgtccggagtgctt
attttgtctctggccacaggaaacattcagattcactctcccgaaagactgttttcgccc
atttacttgttgcaccgcaacgaggctcctcgcaaatacgccaccagtctgcttgtccaa
aactcaaccgattctgacctgtcagggttcatccgtaatgtggagaatcaggacatcaag
gtagaaatgatgagaaaaccggattacatgtcttctgcacctgtgagcgccgccatcaat
gtgacgggatctagtaatgattatacatacattttagcatttaacagtaccacagtgcac
tctctaccgatggctgttaatgtgctcagtaacgccctcctggggggctttaatggcacc
ggacgcatcaaaacgtggagcaaacctttcgactaccaaatcccagacacgacttcctac
gttctgatctacattgagtcaatccttctgggaatgctggctgctggaatgtctgcctat
tttgccatggaccacacaaaagacatagagctgaagtgtcgctcaaccctgaggatctct
ggtctggttccgtccgcatactggtgcggtcaggcagctattgatgttcccttctattat
ctcatattaatctgtatgaccagcactttgtttgcttttcattccacaaaccttctgacc
gcccataacgtcatggtcgtggctctttgtgtgatcggtttctctccagccatggttctc
ttcacatactgcgtgtccttcttgtttgtcaaagtccagagcaacagggacttcttctct
gtggtctccatgatgatttgtatactttctgcatccatagtccagttggcccttgtgaac
ggagacgaaggtctggctcaaatcctgcacaatgcattgtgtttcctcagtccactttac
cctcttatgggctgccttacatgcattaccgtggccaccttccttcagtctactcatgag
gtggatttcctgtggacgaacctcttcatctctgtaatcgctccgtacatccagtgtatt
ttgctgctcatccttctgagatggttggagatgacttatggagggaagaccatgaagaac
gaccagctatgcaggatttcctcaaaaacaaaggacaaagttcagaagaacccagaggag
aacgtaagcgaggatgaggatgtgcaggtggagaaagccagagtcaaggaggcgttgacc
tgtcagtgctgtgaggaaaaaccagtggtggtggtgagcgagctgaggaagcagtacaaa
ggaaagagagaaggtttctcgctcaccaagagaagacaagttgccaccaagaacgtctcc
ttttgcgttcgcaaaggtgaggttttgggtttgttgggtccaaacggagctggaaagagc
accatcatgcatttgctgtctggagacatggagccaactgctggacagatcctgatgggg
gattatggcacagattttcagccaacagaaaaccccctggagcatgtaggttactgtcct
caagtgaaccctctgtggcctagaatcacccttcaggaacacctggagatctatgctgcc
atcaaggggctacatcaacacgatatcccaaacatcattaagcgtgttgtgaacgctcta
gagctgaaggatcatcttcataaacaggccaaaaacttgtctgcaggactaaagaggaag
ctgtgcttcgcactaagcatgctgggaaatcctcagatagttctattggacgagccgtct
acagggatggatcccaaatcaaagcaacgcatgtggagggcgatccgtgccgcctttaag
aacaagcaacgaggagcgcttttgaccacccattacatggaggaagcagaggctgtgtgt
gaccgtgtggctatcatggtttcaggtcaactacggtgtattggttccattcagcaccta
aaggggaagtttgggagaggttacagcctagagataaatctcagggaggagctcacaggt
cttcagcaggctgatctgttgcacaaagagatactgaagatatttccccatgctgctcgt
caggacagttttgccaccctgatggtgtataaaatcccaatggaagacgtgaagtcacta
gccaaggctttttcccagctagagagtgctaaacaaaactttaactttgaagagtacaac
ttctcccagtcaactcttgaacaggttttcatggagttcgcaaaagagcaggagaatgag
gaagaagaggtgggctctctcagcacaacatttcaatggcagaggctgagacaggacggc
tcagtgtccataaatcacgcggacagcgtagtacaccagctatga
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