Paramisgurnus dabryanus (large-scale loach): 135744520
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Entry
135744520 CDS
T10799
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135744520 (sbno1)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135744520 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
135744520
NCBI-ProteinID:
XP_065118766
LinkDB
All DBs
Position
10:3369183..3390065
Genome browser
AA seq
1395 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDFFEVDPQDVIPTPSSQQSLSINALGIGLGNEAPGVPPSP
TVTIREKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTASRQTITVTKVVHTSHAAQLSS
SSSSSICAPSNDQIRLKDLLRPGSLKTSSSLGELMKLKPPPDIAQPVATATATGTKIILV
STKMMNKSAELNNGLKKEVSGKDVARIWVNDDMKMRSFSPVNKLSGMKEEEEPEEEEEEE
LGHAETYAEYMPMKLRIGLRHPDSVVETSSLSSVNPPDVWYRLSIPEETIDRGWLSALQL
EAITYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDL
KYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYK
TRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYAS
ATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMKLRGMYIARQ
LSFTGVTFKIEEVPLTNDYIKMYNKSVRLWVSAREKFQQAANLMDAEQRMKKSMWGQFWS
AHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVS
TAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPLETITEQKGKKRKGTETKKEVK
KARKSGRLSGASSDESNSDDSDKDGDSDDSFKSASSGEDEDDFNPFKDDSSEDDEDDPWL
IRKDTKKSKEKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTAPAMKPSNNIVPVAKTEP
EESSCMTSQDAVEDAQKMKRDLLEQLERLAQDLPPNTLDELIDELGGPDNVAEMTGRKGR
VVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVKN
QRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESL
GALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVSPPSDFDGDFFKEIR
QGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTLSAVIQNA
KKNGRYDMGILDLGSGDEKVKKADAKKFLTPGYSTSGHVELYTVSVERGMSWEDATHVWA
DQNGPDDGFYVQVRNNKKVAILIKEVNPRKRLFMVYRPNTGKQVKLEMYADIKKRSKKVL
SDDAKQHWIDQYNSSADICSHAYWRGNCKKASIGLQCEIGLRCRTYFVLCGSVLSVWTKV
EGVLASVSGANVKMQIVRLRTEDGQRIVGLIIPANCVSPLINILSSSDQSQQLAVQQQQM
WQQLHPQSISHGVST
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttgcttctagctgctcttagtgaaagtggaatatgtcctaat
gacttttttgaggttgatcctcaggatgttataccaaccccttcctcgcaacagtctttg
tcaataaatgctcttggcattggtcttggtaatgaagcacctggagttccaccatcacct
acagtcacaatcagggagaagcctcagccctcaaccactacctttgtcttaaatcaactg
aatcagttgccatcactgggaaccatcgtagtgaccaaaccgtcagccgggaccgcttcc
aggcagactatcacagtaaccaaggtggtacacacaagccatgcagcccagctgagctca
tcctcttcttccagcatttgcgctccaagcaatgatcagatcaggttgaaggaccttctc
agacccggcagcctgaagacgagcagcagccttggagaacttatgaagttgaagcctccg
cccgacatagctcagcccgttgctacggcaacagccacaggcacaaaaattattctggtc
tccacaaagatgatgaacaaatcagccgaattaaacaacggcctgaagaaagaggtgtcg
ggcaaagatgtagcaagaatctgggtcaacgatgacatgaaaatgcggagcttctcacct
gtgaataaactatcaggaatgaaggaggaagaagaaccagaagaggaggaagaagaagag
ttgggtcatgccgagacgtatgctgagtacatgccaatgaaactgaggattggtctgcga
caccctgattctgtcgtagagaccagctcgctctccagcgtcaacccaccagatgtttgg
tacagactttccataccagaagagaccatagacaggggctggttatctgcccttcagctt
gaggccatcacttacgctgcccagcaacacgagacattcctaccaaatggagaccgagcg
gcttatctgattggagatggtgccggagtcggaaagggtcgaaccattgctggcatcata
tatgaaaactatcttcttggcaggaaaagatccctctggtttagtgtctcgaatgactta
aaatatgacgcagagagggatttgagagacatcggagcaaagaacattcaggtccattcg
ttaaacaagttcaaatatggaaagatctcttcaaaacacaatggcagtgtgaagaaaggc
gtgatctttgccacatactcgtctctgattggagagagtcagtctgggggaaagtacaag
acgagattcaaacagctactgcattggtgtggagatgactttgatggtgttatcatattt
gatgaatgtcacaaagccaaaaatgtttgccctattgggtcatccaaacccacaaagacc
gggctggcagtcctagagctacagaacaagctgccgaaagctagggttgtgtatgccagc
gccacaggagcatctgaacctcgaaacatggcctacatgaatcgacttggtatctggggt
gaaggaactccatttaaggaatttactaattttatccaagctgttgagagaagaggtgtt
ggtgccatggagattgttgccatggatatgaagctgagaggaatgtacatcgctcgacag
ctgagcttcacaggtgtgacgtttaaaatcgaagaagttcctttgacgaacgactacatc
aaaatgtacaacaaatcggtccgcttgtgggtgagtgccagggagaagttccagcaagcc
gcaaacctgatggatgccgaacaacggatgaagaagtcgatgtggggtcaattctggtct
gctcaccagaggttcttcaagtacctgtgcattgcttctaaggttcgaagagtggtgcag
ttggcacgtgaggaggtgaaaaacggaaagtgtgtggtgattggtcttcaatcaactgga
gaggctcgaacccttgaagcattggaggagggcggaggcgagcttaatgacttcgtctcc
actgcaaagggtgtgctgcagtccctggtggagaagcatttccctgctccagacagacag
aagctctttagtttgttgggtatagacctgtctgcaaagaaaacgccatcacctttggaa
accatcactgagcagaaaggaaaaaagcgcaaaggtacagaaacaaagaaggaagtgaag
aaagcccgtaaatctggacgtttgtcgggtgccagctcggatgagagcaactctgacgat
tcagacaaagatggcgacagtgacgacagcttcaaatcggccagctcaggagaagatgag
gatgacttcaatccctttaaggatgattccagtgaagacgatgaagatgatccttggctc
atcagaaaagacaccaaaaagagcaaagagaagagaaacaagaagaagaaaaagagcatt
gatccagactccattcagagtgccttgttagcatctggactgggaacgaccaggcccact
tttacggcacctgctatgaaaccttcaaacaacatcgttcctgttgccaaaactgagcca
gaggagagcagctgtatgaccagtcaagatgctgtcgaggatgcccagaaaatgaagagg
gacctgctggaacaactggagcgactggctcaggatctgccacccaacacgctcgatgag
ctgatcgatgagctcggaggtcccgacaatgtcgcagagatgactggacgcaaaggcagg
gtagtcagcaacgacgatggcagcatttcctacgaatcccgatccgaactcgacgttccc
gttgaaatcctgaacctcacggagaagcagagatttatggatggagaaaagaacattgca
atcatctctgaggcggccagctccggtatttcccttcaagccgaccggcgagtgaaaaac
caaaggaggagggtacacatgaccttagagctgccctggagtgctgacagagcaattcag
cagtttggtcgaacgcacagatcaaaccaggtcactgctcccgaatacgtgttcctcatc
tctgaactggcaggggaacaaagatttgcctctattgttgccaaacgtctggaaagcctg
ggcgctcttactcacggtgacagaagagccacagagacgagagacctcagccgatttaac
tttgataataaatacggcagaaacgctcttgaaatagtcatgaagtctatcgtcaatttg
gattctcctttagtgtctccgccgtctgactttgatggtgatttctttaaagaaatccgg
caaggtttaatcggtgtgggtctcataaatgtagaggatagatctggtgttctctcactg
gataaagattacaacaacattgggaagttcttgaaccggattctcggtatggaggtccag
cagcagaacgccctctttcagtatttctcagacacactcagcgctgttatacagaatgct
aaaaagaacggcagatacgacatgggtattttagatttgggctcaggagatgagaaagtg
aagaaagccgatgctaaaaaattcttgacaccaggatattctacttcaggacatgtggag
ctctatacagtcagtgttgagaggggaatgtcatgggaggacgccactcatgtctgggcc
gatcagaatggaccagatgatggattctatgtacaggtgcgaaataacaagaaagttgcc
atcctgataaaagaagtcaaccccagaaagagactcttcatggtgtaccgaccaaataca
ggcaaacaagtgaaactggagatgtatgcagacattaagaaaagaagtaaaaaggttctg
tcagatgatgccaagcagcactggatcgatcagtataactcttcagctgacatctgctcc
catgcgtactggcgagggaactgcaagaaggcctctattgggctccagtgtgagatcggg
ctgcgctgcaggacttacttcgtcctgtgcggttctgtgctaagcgtgtggaccaaagtc
gagggcgtattggcttcggtcagcggcgccaatgtgaagatgcagattgtacgcttgaga
acagaggacgggcagaggattgtgggtctgatcattcctgcaaactgcgtgtctcccctc
atcaacatcctgtcgtcgtcggatcagtcgcagcagctggcggtacaacagcaacagatg
tggcagcagctgcacccgcagagcatcagccacggcgtcagcacgtaa
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