Paramisgurnus dabryanus (large-scale loach): 135745555
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Entry
135745555 CDS
T10799
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03020
RNA polymerase
pdab03420
Nucleotide excision repair
Brite
Enzymes [BR:
pdab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135745555 (polr2b)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135745555 (polr2b)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135745555 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
135745555
NCBI-ProteinID:
XP_065119934
LinkDB
All DBs
Position
16:33941924..33957844
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEDPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKDGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRMYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKSVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDEMDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaagatgaagatattcagtatgatgaagatgatgatgaaatcacccctgat
ctgtggcaggaggcctgttggattgttatcagttcgtactttgatgagaagggtttggtg
cgacagcagctggattcgttcgatgagttcatccagatgtctgtgcagcggatcgtggag
gatgctccgcccatcgacctgcaggctgaggcccagcacacatctggagaggtggaggat
ccgccacgatacctgctgaagtttgagcagatctacctgtccaaacccactcactgggaa
agagatggtgctccctcacccatgatgccaaatgaggccagactacgtaatcttacgtat
tctgctcctctctatgtggacatcacaaaaacaatcataaaggacggagaagagcaacaa
cagacgcagcatcaaaaaaccttcattggtaaaattcccatcatgcttcgctctacgtac
tgtttgctgagcggcctgacggatcgagatctctgcgagttgaacgagtgcccactggac
ccaggaggctacttcatcatcaacggttcagagaaggtcctgattgcacaagagaagatg
gctactaacacagtgtatgtgtttgctaaaaaagactccaagtatgcttacactggagag
tgtagatcatgtctggagaactcctccagacctaccagcaccatctgggtcagcatgatg
gcccgtggaggacagggagtaaagaaaagtgccattggtcaaaggattgtctctactttg
ccgtatatccggcaggaagtgcccatcatcattgtgtttcgagctttgggctttgtgtct
gatagagacatccttgaacacatcatctatgactttgatgatcctgagatgatggagatg
gtcaaaccatctttggatgaggcctttgtgattcaggaacaaaacgtagctctgaacttc
attggctctagaggcgccaaacccggtgtcaccaaagagagaagaattaaatatgctaaa
gaggttcttcagaaggaggtgctgccacacgttggtgtatcagatttctgcgagaccaaa
aaggcgtatttcttaggttacatggttcacagactgctattggctgctctgggtaggcga
gagctggatgacagagatcactacggcaacaagaggcttgatcttgccggacctctgctt
gcatttctttttagagggatgttcaagaacctgctgaaggagatcaggatgtatgcacag
aagttcattgataggggcaaggactttaatctggagctggccattaagactcgcatcatt
tctgatggcctcaagtactcgctagccacgggtaactggggggatgtgaagaaagcccat
caggccagagcaggtgtatctcaggtgttgaataggttaacatttgcatccactctctcc
cacctgcgtcgtgtaaactcccccatcgggcgagatggcaaacttgccaaacctagacag
ctccataacacattgtggggtatggtgtgccctgccgagacccctgagggtcatgctgta
ggtttggtgaagaatctggctcttatggcctacatctctgtgggttctcagccctccccc
atcctggagttcttggaggagtggagtatggagaacttggaagaaatctcacccgctgcc
attgcagatgcaactaagatttttgtgaacggctgttgggtcggcattcataaagaccct
gagcaactgatgaacactttacgaaaactgaggagacagatggacatcatcgtgtctgag
gtgtcgatgatccgagacattcgtgaaagggagatcaggatctacactgatgctggtagg
atctgccgtcctcttctcatcgtggagaaacagaaactacttctgaagaggcgacacatc
gaccagcttaaggaaagggaatataataactacagttggcaagacctggtggccagcggt
gttgttgaatatatcgacaccttagaagaggagactgtgatgttggctatgactcccgat
gaccttcaggagaagagcgtggcttattgctccacttacacacattgtgagatccacccg
tccatgatcctgggagtctgtgcatccatcattcccttccctgatcacaaccagtctccc
agaaacacgtaccagtctgctatgggtaaacaagccatgggagtttacatcaccaacttt
cacgtgcgtatggacaccctggcccacgtgctgtactaccctcagaaacctctcgtcact
acacgctccatggagtacctgcgcttcagagagctgccagcaggcatcaattctattgtg
gctattgcttcatatactggatacaaccaggaagattctgtcatcatgaaccgttcggct
gtggatcgtggattcttcaggtcagtgttctaccgctcgtataaggagcaggaatcgaag
aaaggctttgaccaggaagagatctttgagaaacccaccagagagacctgtcaaggcatg
cgacacgccatctatgacaaactagatgacgatggtttgatcgctcccggtgtgcgtgta
tccggcgaggacgtcatcatcggaaaaaccgtgactcttcccgagaacgacgatgagatg
gatagcaccaaccgtcgctacactaagagagactgtagcacttttctgcgcacaagtgag
actggcattgtcgaccaagtcatggtcacgctaaaccaggagggctacaagttctgcaaa
atcagagtgcgttcagttcgcattccccaaatcggagacaagttcgccagtcgtcacgga
caaaagggtacctgtggtatccaatacagacaagaggacatgcctttcacgtgtgaaggt
atcactcccgacattatcatcaatcctcacgccatcccgtccagaatgacagtcggccat
ttgatcgagtgtctgcaagggaaggtttctgcaaacaaaggagagatcggtgatgccaca
ccattcaacgacgctgtgaacgtacaaaaagtctccaacctgctgtcagaatatggctac
catctgagaggaaatgaggttttgtataacggtttcactggtcgtaagctcacctcacag
atcttcattggacccacatactaccagcgtctgaagcacatggtggatgataagattcac
tccagggcccgtgggccggtccagattctcaacagacagcccatggagggcagatcacgt
gatggtgggctgcgattcggagagatggaacgtgattgtcagattgctcacggtgcagcg
cagttcctgaaggaaaggctattcgaggcatctgacccgtaccaggtccacgtttgcaat
ctgtgcggtctcatggccatcgccaacactcgcacgcacacctacgagtgcaggggctgc
cgcaacaagacacagatttctctggtcaggatgccgtacgcctgtaaactcttattccag
gagctgatgtctatgagcatcgccccacgaatgatgaccagctga
DBGET
integrated database retrieval system
