Paramisgurnus dabryanus (large-scale loach): 135745667
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Entry
135745667 CDS
T10799
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04210
Apoptosis
pdab04218
Cellular senescence
pdab04620
Toll-like receptor signaling pathway
pdab04621
NOD-like receptor signaling pathway
pdab04622
RIG-I-like receptor signaling pathway
pdab04623
Cytosolic DNA-sensing pathway
pdab04625
C-type lectin receptor signaling pathway
pdab04920
Adipocytokine signaling pathway
pdab05132
Salmonella infection
pdab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135745667 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135745667 (nfkb1)
04218 Cellular senescence
135745667 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135745667 (nfkb1)
04621 NOD-like receptor signaling pathway
135745667 (nfkb1)
04622 RIG-I-like receptor signaling pathway
135745667 (nfkb1)
04623 Cytosolic DNA-sensing pathway
135745667 (nfkb1)
04625 C-type lectin receptor signaling pathway
135745667 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
135745667 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135745667 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
135745667 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135745667 (nfkb1)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
135745667 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
135745667
NCBI-ProteinID:
XP_065120088
LinkDB
All DBs
Position
16:34333257..34370382
Genome browser
AA seq
931 aa
AA seq
DB search
MAGEDPYLPPHAGYLDPLDAFREDTMWMPMDPTFQPMQHSNALRAVDAPYLQIVEQPKQR
GFRFRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNTQEPHLHAHSL
VGKQCDKGICIADLQPKDSSISFPNLGILHVTKKNVSKILEERMVEAYRMGYNCGVYIHP
DIDNLQGEVRMPRELTDHERSLICSTATQQSKEMDLSVVRLMFTAFLPDSDGGFSRRLDP
VISEPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDTGSI
WEAYGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQI
IDKEEVQRKRQKTLPHFPDYSGAGGGAGGMFRGGGGPTTGSGPSGGGSGGHFYQGYQTYN
NYGSGYNFSPGMGGAGTSIKQSSQEPVEDSDEDSSGDNDDYPAAGGVMRICGQPESVKSE
NTEPIEYLESDMTDCVIDPHLAELAKKQAEALFYYALSGDPRMLLAPQRPLMTTQDENGD
TGLHLGVIHSQTDAVRNLAQIIFVLPGEDVLNMRNDLYQTPLHLAVVTQQKEVVEALLEA
DVDVTLADRNGNTALHLAAQHKDGSVLRLLLKHNSAARLTGVHNTAGLCPLHLAVRANSL
GCMRALLEAGVDAEVQELTCGRTALHLATEMENLSLAGCLLLEGNANVDSVTYNGSTPLH
IAAGRGSTKLTALLMAAGADPHKENFEPLFFKDDETCTTCDDDDEEDEGYIPGTTPLNMA
ASLEVYDILNGEEYQPTTVVVPPQGDMSSLSCETKQDLCQALEEQTGGWESLAHALGLGI
LTSAFKLSSCPAGKLLDSYEVSGGTVHDLIEGLKQVGNSCAVSLLQAVCKEAETTSPQLT
GPELCKAIQGLTLGSQREESGICDSGVETSF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggacccctacctcccgcctcatgcagggtacttggatccattggatgca
ttcagagaggacacgatgtggatgcccatggaccctacatttcagcccatgcaacacagt
aatgctttaagggcagtcgacgcaccttatctgcaaattgtcgaacaaccgaaacagagg
ggctttaggttccggtatggatgtgagggcccctcccatggaggactcccaggggcctcc
agcgagaagaacaggaagtcctacccacaagttaagatctgtaactaccagggtgcagca
cgagttgtagttcagttggtgaccaacactcaggagccacatcttcatgctcacagtctg
gtgggcaaacagtgtgacaagggaatctgcattgccgacctgcaacctaaagactcaagc
atcagttttcctaacctgggcattttgcacgtgacaaagaagaatgttagtaaaattctt
gaggagaggatggtcgaggcctacaggatgggatataactgcggcgtatacattcatcct
gacattgataacctacagggagaggtccgcatgcccagagaactcacagatcatgaaagg
agcctgatatgcagtacggccacccaacaatcaaaggagatggatctgagcgtggtgcgc
ctgatgttcacggcattcctgcccgacagcgatggaggcttctcccgcagactggacccg
gtcatatccgaaccaatctttgacagcaaggccccaaacgcctccaatctgaagatagta
cgaatggaccggaccgccggctgtgtcacaggaggagaggaggtctatctgctgtgtgac
aaagtccagaaagatgacattcaggtgaggttttatgaggacgatgatacgggttcgatc
tgggaagcctatggagatttctcacccactgacgtgcacagacagtttgccattgtcttt
aagacgcctaaatatcgagaccagaaccttcagaagcccatttctgtgtttgtacagctt
aagcgaaaatcggacaatgaaacgagcgaacccaagccgtttacctaccacccacagatc
atagataaagaagaagtccagagaaagagacaaaagacccttcctcactttccggactac
agtggagcggggggcggagctgggggcatgttcagaggagggggcgggcctactacaggt
agcggccccagtggaggaggtagtggaggacatttctatcagggttatcaaacctataac
aattacgggtctggatacaacttctctcctggaatgggaggagctggtaccagcatcaaa
cagtcatctcaagaacctgttgaagacagcgatgaagacagtagcggtgataatgatgat
tatccagcagcaggtggtgtgatgcgaatctgtggccaacctgaatctgttaagagtgaa
aatacagagcctattgaatatctagagtcagatatgacggattgtgtgattgacccacat
ttggcagaacttgcaaagaaacaggctgaagctcttttttattacgcactgagcggtgac
cctagaatgctgctggctccacagcgccccctcatgaccacacaggacgagaacggggac
acaggtttgcatctaggggtgattcacagtcaaacagatgccgtgagaaatttagcacag
atcatctttgttcttcctggagaggatgtgctgaatatgagaaatgatctgtaccagact
cctttgcaccttgcggtggtgacgcagcagaaagaagtggtggaggccttacttgaagcc
gacgtggacgttacgctcgcagatcgtaatggaaacacggcacttcacctggcagctcag
cacaaggatgggagcgtgctacgattgctgctgaagcacaactcggcagcgaggttaact
ggcgttcataacactgcaggtctctgcccacttcacctggctgttcgggccaacagcttg
ggttgtatgagggccctgctggaggccggggtggacgcggaggtacaggagctcacgtgt
ggccgcacggcgcttcacctggccacggaaatggaaaacctttctctcgcaggctgtttg
ctgctggagggtaatgcaaatgtagacagcgtcacgtataacggatccacccctctgcac
attgccgcagggcgaggttcaaccaaactgacggcacttctcatggctgcaggcgctgat
ccacataaagagaactttgagccgctgttcttcaaagatgatgagacgtgtactacatgt
gatgatgatgatgaggaagatgaaggctatattcccgggacgacccctctaaacatggca
gcctccctagaggtgtatgatattcttaacggagaagagtatcaacccaccactgttgtt
gttccaccacaaggtgacatgagcagcctgagttgtgaaacgaagcaggacctctgccag
gcgctggaggagcagacgggaggctgggagagtttggctcatgctctcggtctgggcatt
ctcaccagtgcatttaaactcagctcctgcccggctggaaagctgctggacagctatgag
gtgtccgggggaacggttcatgatctgattgagggactcaagcaggttgggaacagctgt
gctgtaagtttactgcaggccgtgtgtaaggaggctgaaaccacatcacctcagctcaca
ggtccagagctgtgtaaggccattcagggtttgacattgggctctcagcgggaggagagt
gggatatgtgacagcggagttgagacgtctttctaa
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