Paramisgurnus dabryanus (large-scale loach): 135745933
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Entry
135745933 CDS
T10799
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135745933 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135745933 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135745933 (pdlim5b)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
135745933
NCBI-ProteinID:
XP_065120483
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Position
10:601092..662855
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AA seq
618 aa
AA seq
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MSNNYSVTLIGPSPWGFRLQGGKDFSMPLTISKLTDGGKAAKAKISVGDTVLSIDGIATN
AMTHLEAQNKIKACTGNLSLSLMRSSGGSKEEPLEIIKPVPISQPSAPSTTSTSSANLTP
GSNPYNKTARPFGGAASTVRSVSPSLSPTPPMAPKASIPSATSAFTPAAPSQQPPQPPFP
LGGGTGRSLPSSSSAPKPASGQYPFANTSSTSSSGSSSPARVTAPSSVPTAPQPSVYNTP
FSLYSNENACEVAMGQRRGLLESRGEQLNGTARKPVMETEVNHVSPASDASKKRLIEDTE
DWHPRTGTSQSRSFRILAQITGTENDQAQENRPGKKEETVDVQPSAHLTSSVKTMTKTPA
GAPRQGNGVPSTTTKNWQSGNTAGFPKAGAPVPQTGPSFGRVTNSNQKSPNPPVPKANPK
DGEDTLVQRAEHMPADTRTPMCAHCNTIIRGPFLVAMGKSWHKDEFSCAHCHSSLADLGF
VEERGSVFCENCYEQFFAPECCRCQQKILGEVINALKQTWHVYCFLCASCQRPIRNNTFH
LEDGQPYCETDYYTLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCSVCTESLEGQAF
FSKKDKPLCKKHAHTVQF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataactacagcgtgaccctgatcggaccttcaccctggggctttagacttcag
ggtgggaaagacttcagtatgcccctcaccatctccaaacttacagatggaggaaaggcg
gctaaagctaaaatcagtgtgggtgacactgtgctttctatcgatgggatcgccactaat
gccatgacacatctggaggcccaaaataaaattaaagcctgtacgggaaacctcagcctg
tcactgatgagatcttccggtggttcaaaggaggaaccactggagattataaaacctgtg
cccatcagccaaccatctgcacccagcacaacctccaccagctctgccaacctcaccccg
ggcagcaacccctacaataaaaccgcacggcccttcggaggagccgctagtactgtgaga
tcagtcagcccgtccttgagtcccacgcctcccatggcacccaaagcctccatcccctcg
gccacctccgcttttacgccagcagctccgtctcagcagcctccccagcctccctttcct
ctgggaggaggaaccggacgttcgctgccctcatctagctccgcccctaagcccgcttct
ggacaatacccctttgccaatacctcctctacttcctcctccggctcctcctccccagcg
agagtgacagctccctcctctgtcccgaccgcccctcagccctcggtctataacacgccc
ttcagcctctactccaatgagaacgcctgtgaggtggccatgggtcaaaggcggggtctt
ctggagagcagaggggaacaacttaatgggactgcacgtaaacctgtcatggaaaccgag
gtgaatcatgtgtctcctgcgagtgatgcaagtaaaaagcgtctgatcgaggacacggag
gactggcatccacgcacaggaacatcacagtctcgatccttcaggatcctggcacagatc
acaggaacagagaacgatcaagcccaggagaaccggcccggaaagaaggaggaaaccgta
gatgttcagcccagcgctcatctgacatcttcagtgaaaaccatgactaaaactcctgct
ggagctcctcgacagggcaacggagtcccatcgactacaaccaaaaactggcagtctgga
aacactgcaggatttcccaaagcaggtgcacctgtgccacagacgggcccctcgttcgga
cgggtgaccaacagcaatcagaaaagcccgaatcctcctgtgcctaaagctaaccccaaa
gacggagaggatacactggtacaaagagccgaacatatgccagcggacacgcgcacgccc
atgtgtgcccactgtaacaccatcatcaggggtccgttcctggtagccatgggtaaatcc
tggcataaggatgagttttcctgtgctcactgtcactcctcactggcggatttgggattt
gtagaagaacgagggtctgtcttctgtgagaactgttatgagcagttctttgcccccgag
tgctgtcgctgtcaacaaaagattttaggggaagtcatcaatgccctgaagcaaacctgg
cacgtttactgtttcctgtgtgcctcctgccagaggccaatccgtaacaacacctttcac
ctggaggacggacagccgtactgtgagacagattactacactctctttggcaccagctgt
cacggctgtgatttccccattgaagctggtgataaattcttagaggcgttgggcttcacc
tggcacgacacctgtttcgtctgttcggtctgcactgagagtttagagggtcaagccttc
ttctccaagaaagacaagcccttgtgcaagaaacacgctcacaccgtccaattctga
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