Paramisgurnus dabryanus (large-scale loach): 135746120
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Entry
135746120 CDS
T10799
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135746120 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135746120 (cpsf4)
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135746120 (cpsf4)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135746120 (cpsf4)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135746120 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
135746120
NCBI-ProteinID:
XP_065120739
LinkDB
All DBs
Position
3:33564180..33567236
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AA seq
271 aa
AA seq
DB search
MQELIACVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEYFMRAACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKQQIIQSTNRSSQSLIQLTNPNVNHNQRMPNAVGIVHPHGHGNMGGPRGPR
PLEQVTCYKCGEKGHYANKCSKGHLAFLSGQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcctgtgtcgatcacatcaagtttgatcttgaaattgctgtagag
cagcaacttggtgctcaaccattgccatttccaggaatggataaatctggcgctgctgtc
tgcgagtatttcatgcgagctgcctgtatgaaaggtgggatgtgtccgttcagacatatc
agcggtgaaaagactgtggtgtgcaaacactggctcagaggtttatgcaagaaaggagac
caatgcgaatttttacacgaatatgatatgacaaagatgcctgaatgctatttctactct
aaattcggagagtgcagtaacaaagagtgtccgttcttgcatattgacccagaatctaaa
attaaagattgcccgtggtatgataggggattttgtaagcatggtccggattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggattttgcccagagggcaag
tcatgcaagtttatgcacccgagatttgaactccctatgggtgcaactgaacagccacca
ttgcctcagcaagcacagtctcagcaaaagcaacaaatcattcagtccacaaacaggtcg
tcacagtcactcattcagttaacaaaccccaatgtaaaccacaaccagagaatgccgaat
gctgttgggatagtgcatcctcacggccacggcaacatgggcggacctcgtggtcctcgt
ccactggaacaagttacatgttacaagtgtggtgaaaagggccattatgctaacaaatgc
agtaaaggacacttggcgttcctgagtggacagtaa
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integrated database retrieval system
