Paramisgurnus dabryanus (large-scale loach): 135746461
Help
Entry
135746461 CDS
T10799
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135746461 (trip12)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
HECT type E3
135746461 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135746461
NCBI-ProteinID:
XP_065121186
LinkDB
All DBs
Position
9:40142933..40187356
Genome browser
AA seq
2093 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPLDHALAGRLQSEQVNQKANSPPESRRSNSKASKAP
PSSAAGSARGHASRRNSLSISASSHTIPDPDIEAAGTSGQQGRREGSSTRALKRSSASDP
IISAAKRPKALSNHPSESASSGQTPPTASLELTEQKKAPGTKSKKRRLATEPTPSTSSRA
LSKKSALYPGPSGGPSSSSPSQKRKKADASSLSSSSSSLPSSTSAAGPLPPRIEASRAAK
PTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSAVTGTNSCAPQGARLKQGKDQS
KARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAETSS
KPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAA
EARRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRL
QALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAIEM
CQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVD
AIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNA
LAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQ
QVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETLRFL
LCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTTEGA
IWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTAR
AIQRKPNPLANPNIGGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPA
VRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKL
PDVFSVYFRREGVMHQVKNLAESEAFLTSPPKACTSGTASLCTTTITTATSTAASNVTPD
LGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKGDNQAKSPTTT
QSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAWIK
EQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDRGVECLEEISSIVSESDVS
SFEIQHSGLVKQMLLYLTSNSDRDAVSRDVRIKRFLNVFFGCPIPGQEPLGRLEPTENAP
LLSLVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNV
KQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGS
VRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIWYK
PVREDEEGSKDTVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVANPLESYLISDPP
EGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPTSEFINSKLTAKANRQLQDP
LVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQD
SRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALVS
QELQRADLGLWRGEEVTLSNPKGSHEATKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRF
LGKLMAKAVMDFRLLDLPLGLPFYKWMLRHETSISSHDLVNIDPGVAKSIQHLEDIIRQK
KRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLE
EYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSESWDVKTL
MECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIV
RKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccactagaccacgcacttgctggaaggttgcagtcagagcaagtaaac
caaaaagcaaattccccacctgaaagtagaagatctaattctaaggcttccaaagccccg
cccagctcagccgccggctccgcccgcggccacgcctctcgaagaaacagtctctctata
tccgccagttcacatacgattccagatccagacatagaagcagcagggacttcaggccag
caagggagacgggagggcagcagcacccgagctcttaaacgcagctccgcttcagacccc
atcatcagcgcggccaagcgacccaaagcgttgtccaaccacccctcggagagtgcatcc
agcgggcaaacgcctcccacggcctcactcgaacttacagagcaaaagaaggctccaggc
actaagtctaaaaagagaaggttagcgactgaaccgacccccagcacgtccagcagagcc
ttgagcaagaagagcgcgttgtaccctggccccagcgggggccctagcagcagcagccct
tctcaaaagcgcaagaaggcagacgcctcctcgttatcatcatcctcttcctccctcccc
agttcaaccagcgcggcaggccccctgccaccccgcatcgaggccagccgggcagccaaa
cccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagcactgtaact
gactcctcttcttcctctgcctcttcctcgtcctcttcttcttcctcctcctcagccgtc
acaggcaccaacagctgtgccccacagggcgccaggctaaaacagggcaaggaccagagc
aaagcgcgacgatcgcgctctgcctcctccccttctccccgcagaagcagccgagataaa
gagcaaagcaaggcggccggctcctccaagttcgactggacgtcccgctttaactccaaa
gtcaacctgccaaagcccaaactgtccctgccaggatcggccaaggctgagacctcctcc
aagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtccactaagaag
cgtagtgagtctcccccagcagagctccccagctttaggaggagcacacggcagaagacc
acgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgcggagcagcc
gaagctcgccgacaggagaaaatggccgactccgacaacaaccaggacggggccaattcg
tcagccgcgcgcacagaggagacgcctcaaggagcgtcagcttctagctcagtggctgga
gcggtgggcatgaccacctctggagagagcgaatcagatgactcagaaatgggaaggctg
caagctctactcgaggccaggggccttcctccacacctgttcggaccctttgggccccgt
atgtctcagctgtttcacaggaccatagggagtggagctagctcaaaggcacaacagttg
ctacagggcctgcaggctactggagatgaatcccagcagctccaagctgctatagagatg
tgccagctcttagtgatgggcaatgaggagacactggggggttttcctgtcaagagcgtc
gtaccggccctgatcacactgttacagatggagcataattttgatattatgaatcatgcg
tctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtggtggtggac
gcaatccccgtcttcctggaaaagcttcaggtcattcagtttatagatgttgcagaacaa
gccttgaccgcactggagatgttgtcacggaggcacagtaaagccatcttgcaggctgga
ggtctggctgattgtttgctgtacttggagttcttcagcatcaacgctcagaggaacgca
ttagccatcgctgctaactgctgtcagagcatcacgccggatgagtttcatttcgtcgct
gactctctgcccctgcttactcagagactcacacaccaggataagaaatccgtcgaaagc
acttgtctctgttttgccaggctggtggacaactttcagcacgaggagaacctgttacaa
caagtggcgtcccgggacctgctgaccaatattcagcagctgctggtgctcactccacct
gtgctcagctcgggcatgttcatcatggtggtccgcatgttctccctcatgtgctccaac
tgcccctgtctggccgtacaactcatgaaacaaaatatcgcagagactttgcgtttcttg
ctctgtggagcatctaatgggagctgccaagagcagatcgaccttgtgcccagaagccct
caggagctttatgaactcacctcgctcatctgtgaattgatgccgtgtctgcccagagag
ggcatctttgcagtggatgccatgctaaaaaagggcagtgcccagaccacagagggtgcc
atctggcagtggagagatgacagaggcctgtggcacccgtacaaccgaatcgacagccgc
attattgagaccgctcatcagaatggagaagatgagataagtctgtctactctcggtcga
gtctacaccatcgacttcaactctatgcagcagataaatgaagatactggcaccgcccga
gccattcagagaaaacccaaccctctggccaaccctaatattggaggaggacacctggag
gtgcggagagaagatgcacgtgctcagctgatgaaagaggaccctgagcttgctaagtgt
ttcataaagactctgtttggggttctgtatgaggtgtacagctcctcggccgggcctgct
gtcagacacaagtgccttagagccatcctacggatcatctattttgcagatgcagagctg
cttaaagatgtgctacgcaaccatgctgtgtccagtcacatagcttccatgctgtccagt
caggatctgaagattgtagtgggctctctgcagatggctgagattctcatgcagaagctt
cccgatgtattcagtgtttatttcagacgtgaaggtgtgatgcaccaagtaaagaacctt
gccgaatcggaagcgtttcttaccagccctccaaaagcatgcacaagcggcacggctagt
ctttgcaccaccaccatcaccacagccaccagtacagccgcctccaacgtcacgcccgac
ctgggttccccgagcttccagcacagcatggatgactctctggacctcagcccacaaggt
aggttgagtgatgtgcttaaaagaaagcggcttcctaaaagaggaccaaggcgccccaag
tattccccacccagagacgacgacaaaggggataatcaggctaagagcccgaccaccaca
cagtcccccaagtcctctttcctggccagtctgaatccaaagacctggggtaaactgggg
acccagacaaacagcgctaactccgagccctcacgcaccgcaggggtcagcggtctggca
cgtgtgccgcccaaagactcagtctcaaataacagggataagataaaggcttggataaaa
gagcaagccagtaagtttgtagagcgttactttaactcagagagcgtggatggaagcaac
ccagcactgaatgtcctgcagagactctgtactgctacagaacagctcaacctgcaggtc
gaccgtggtgtggagtgcttagaggagatcagcagtattgtgtccgaatcagacgtctcg
tcctttgagatccagcacagtggactcgtgaagcagatgttgttgtatctgacatcaaac
agcgatcgtgacgctgtcagcagagatgtgaggatcaagaggttcctcaatgtgttcttc
ggctgcccgattccaggacaggaacctcttggacgtttggagccaaccgaaaacgctcct
ctactgtcgttggtgcacaagatgaataactgcctcagtcagatggagcagtttcctgtt
aaagtgcatgactttccaagtgggaacggcaatggcagcaggggttcacaagcacttaag
ttctttaatacccatcagctgaagtgtcagctgcagagacatccagactgcactaatgtg
aagcagtggaagggcggcccggtcaaaatcgaccccctggccttagtacaggccatcgag
agataccttgttgttagagggtacgggaggataagagaggaagatgaagacagtgatgat
gatggttcagatgatgagattgatgagtctctggcggctcagttcctgaattcaggaagt
gtgcgtcacaggctacagttttacataggcgagcacctgctgccgtacaacatgaccgtg
taccaggccgtcaggcagttcagtttacaggccgaagaagagcgagagagcacagatgat
gaagcaaaccctctgggacgcgccggcatctggaccaaaacacacactatatggtataag
ccggtccgagaggacgaagagggctctaaagacactgttggaggaaagagaggccgtgca
cagacggcacccactaaaacatcccctcgaaatgccaagaaacaggacgaactgtggcac
gagggtgtgtgtcccagtgtggcaaacccattagagtcatacctcatatctgaccctccg
gagggcatcacatttgatgatccttcaatggaggtgattctgctgctgagggtcctgcac
tccatcagcagatactggttttacctgtacgataatgctgcatgtaaggagatcattccc
actagtgagtttattaacagtaaactgacagcaaaggccaacagacagttacaagatcct
ctggtgataatgactggaaacatccccacctggctcaccgagctcggcaagacctgcccg
ttcttcttcccattcgacacacggcagatgctcttctacgtaactgcattcgaccgggac
cgcgccatgcaacgcctcctcgacaccaaccctgagatcaaccagtcggactcgcaggac
agccgtgtcgctccccgtctcgacaggaagaagagaacgataaatcgcgatgagctcctg
aagcaagcagagtctgtaatgcaggacctcgggagctccagagccatgctggagatacag
tatgagaatgaggtgggaacgggtctcggtcctacacaagagttttacgctttggtgtct
caggagttgcaaagggcagatttgggactttggcgaggagaggaagtcactctgtccaac
ccaaaagggagtcacgaggctaccaagtatatgttcagctccaggggtttgttcgcagta
cctttcggacgaactaccaaaccagctcatatcgccaagatcaaaatgaagtttcgtttt
cttggcaagctcatggctaaagcagtcatggacttcagattgttggatttgccgttaggt
ttgcccttctataagtggatgttgagacacgagacatcaatcagctctcacgacctggtc
aacatcgatcctggtgtggccaaatctatccagcatctggaggacatcatccgacagaag
aagagaatagagcaggacagatcacatacgcgggagaccctgcagcaggccttggagagt
cttaacatgaacggctgctcagtagaggacctggggctcgacttcactctgcccggattc
cccaacatcgagctgaagaagggaggcaaagatgtgccagtcaccattcacaatttggag
gaatacctcagattggtggtctactggaccctcaatgagggcgtgtcccgacagttcgag
tcttttagggaaggattcgagtccgtgttccctcttcatcacctgcagtacttctatcct
gaagagctggatcagttactctgtggtagcaaatcagagtcctgggatgtaaagacactg
atggagtgctgcagaccggaccacggctacacgcacgacagtcgtgcagtgcggttcctg
ttcgaggtgctgagcagtttcgatgcggagcaacagaggcttttcctgcagtttgtcaca
gggagccccagacttccagtcggaggattccggagtttaaaccctcctctcaccatcgtt
cggaagacgttcgagtcgacggagaacccggacgactttcttccttccgtgatgacgtgc
gtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactgttg
attgccgcccgtgagggtcagcagtctttccacctgtcctga
DBGET
integrated database retrieval system
