Paramisgurnus dabryanus (large-scale loach): 135746465
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Entry
135746465 CDS
T10799
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdab03016
]
135746465 (tsen34)
Enzymes [BR:
pdab01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
135746465 (tsen34)
Transfer RNA biogenesis [BR:
pdab03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
135746465 (tsen34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
135746465
NCBI-ProteinID:
XP_065121194
LinkDB
All DBs
Position
9:40399199..40403851
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AA seq
297 aa
AA seq
DB search
MEDVKGDMDAESDSEHQTTGDDVIDISFCGSTPLLWKVSDIKRCRGAGVIGALVGSLARQ
PRQNVRLGRPLELMQEEALLLEETSAATASLHTQECEDEEVHSQAVRQYEAGQESSYKEQ
CALALEDKKTVLRRIMQEKDHGSDDSGNAVKDRLTALDQGFSFPRSAMAVQLCTARSGFS
QCLEERSFLSTDWPMPRDERLETRFHVYRDLRSKGYYLTSAGKFGGDFLVYPGDPLRFHA
HFIALCMPIDEQIPICDILAIARLGSNVKKTVLLCSPQMGKDEGCVVYSSLQWSSMV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtaaagggggacatggatgctgagagtgacagtgagcatcagacgaccgga
gatgatgtgattgacatcagtttctgtggctccacccctctgttgtggaaggtgtcggat
ataaagaggtgcagaggtgcaggtgtgatcggggctcttgttggctctctggcccgtcag
cctcggcagaatgttcgactggggagaccgctggagctgatgcaggaggaggctctgctg
ctggaggagacgagcgctgctacagcatcactgcacactcaggaatgtgaagatgaggaa
gtgcattcacaggccgtgagacagtatgaagcaggacaggagagcagttataaggagcag
tgcgctctggccctggaggataagaagacagtgctgagaagaatcatgcaagagaaggac
catggttccgatgactctgggaatgcagttaaagatcgtcttactgcactggaccaaggt
tttagttttccacggtcagccatggcagtccagctttgtactgctcgctccggcttcagt
cagtgtctggaggaacgcagtttcctgtccaccgattggccgatgcctagagatgaacgc
ctggaaaccagattccatgtatacagggatctgagaagtaaaggctattatctgacctcc
gcagggaagtttggaggagattttttggtatatcctggtgaccctctacgctttcatgct
catttcattgcgctgtgtatgcccattgatgaacagataccgatttgtgacattctagct
atagctcggctgggctctaatgtgaagaaaacagtgttgctttgctctcctcagatggga
aaggatgagggatgtgtggtgtattcatcactgcagtggagctctatggtttaa
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integrated database retrieval system
