Paramisgurnus dabryanus (large-scale loach): 135746557
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Entry
135746557 CDS
T10799
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135746557 (ssrp1b)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135746557 (ssrp1b)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
135746557 (ssrp1b)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
135746557 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
135746557
NCBI-ProteinID:
XP_065121233
LinkDB
All DBs
Position
4:complement(16286442..16302124)
Genome browser
AA seq
702 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRLSKQTVVYKNSKTGKVDTISVTELTQAQWRRVCLGH
GIKLSTSTGHIYKYDGFKDTDFEKISEYFKTNYKVELTEKDMSVKGWNWGTAKFNGPLLS
FEVNDNSAFEIPLSSVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPTPGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTLNMNEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEGNDSDDSEGESDES
FNPGEEDDDIAEEYDSKASASESSGNEGDSDGDRKKKPAKKAKLIKERKPRKKEKKAKDS
DAPKRPMSAYMLWLNSSRERIKSENPGISVTEISKKAGEMWKQISREKKEEWEGKAEIAK
KEYERAMREYKESGGGSSGSSKKEKKKKKGAKNEEKRKKPSGGREKEKERATGNDSFKSR
EFISSDESSSESEKGKRRKRKGSDDEEEVASTPPSSEESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacacattggagttcaatgaaatttatcaggaggtcaaaggctcctggaatgat
gggcgcttgcgcttaagtaaacagacggtggtgtataaaaacagtaagaccgggaaagta
gacaccatttctgtcactgagctcacacaggcgcagtggaggagagtctgtctgggtcat
ggcattaaactgtccaccagcactggtcacatctacaaatatgatggctttaaagatact
gactttgagaagatctcagagtacttcaaaaccaactacaaagtggagctgacagagaaa
gatatgtccgtgaagggctggaattggggcactgcgaagtttaatggaccattactttca
ttcgaggtgaatgacaattctgcatttgagatccctctctccagtgtatcccagtgtgca
acgggaaagaatgaggtcacattggagtttcatcagaatgatgacacagaggtgtctctc
atggaggtgcgcttctatgtcccacccacccctggagacgagggttcagatcctgtggag
gcatttgctcagaacgttctgtccaaggcagatgtgatccaggctacaggagatgccgtg
tgtattttcagagagctgcagtgtctcacacccaggggcaggtacgatatccgcatttat
cccacattcctccatctgcatggtaaaacgtttgactacaagatcccatacaccacagtg
ctccgcctcttcctgttacctcataaagaccagagacagatgttttttgtgatcagtctg
gacccgcccattaaacagggccaaacccgctatcattttctcatccttctgttttccaaa
gaagaggacctcagtctgacgctcaacatgaacgaggatgaggtggagagacgttttgag
gggaagcttaataaaaatatgtctggatctctctatgagatggtcagcagagtcatgaag
gccctggtcaacaggaagatcacagtccctggaaattttcaaggtcactcaggtgcacag
tgtataacgtgttcatataaggcaagttcaggtctgttgtatccgctagaaaggggtttt
atctacgtgcacaagcctcccgtacatctgcgctttgaggagattgcctgtgtgaatttc
gcccgaggaaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcaat
cagtacacattcagcagcattgagagagaggaatatggaaagctctttgactttgttaat
gctaagaagctaagcattaagaacagaggcttcaaagagggcatgaaaggtaacgacaat
atgtacagtgactcagacgacgaccagcatgatgcttatctggaacgcatgaaggaggag
ggcaagatccgtgaggagggtaacgacagtgacgactcggagggcgagagcgatgaatct
tttaatcctggagaagaagatgatgacattgctgaagagtatgacagtaaggcctctgcc
agtgaaagcagtggcaatgaaggcgacagtgatggagaccggaagaagaaaccagccaag
aaagccaaattaataaaagaaagaaaaccacgcaagaaggagaaaaaggcaaaggacagc
gatgcccccaaaaggccaatgagtgcctacatgctgtggctgaattcaagtagagaacgg
atcaaatcagagaacccgggcatctctgtcacagaaatctcaaaaaaagctggagaaatg
tggaaacagatcagcagagagaagaaagaggagtgggaaggaaaagcagaaattgccaag
aaagagtacgaacgagcaatgagggaatacaaagagagcggcggaggctcctctggctcc
tcaaaaaaggaaaagaagaagaagaaaggagccaagaatgaagaaaagaggaaaaagcca
agtggtgggagagagaaagagaaggagcgagcaacaggcaatgacagttttaagagtcga
gagttcatatccagtgatgagagctcatcagagtctgaaaagggcaaaaggcgcaagcgc
aaggggtctgatgatgaagaggaagtggccagcacaccaccaagctctgaagagtctggc
tcggactga
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