Paramisgurnus dabryanus (large-scale loach): 135747338
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Entry
135747338 CDS
T10799
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X2
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135747338 (cacna1ha)
04020 Calcium signaling pathway
135747338 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135747338 (cacna1ha)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135747338 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135747338
NCBI-ProteinID:
XP_065122036
LinkDB
All DBs
Position
3:33328245..33389037
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AA seq
2199 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDLKCQSEWCVILQAFDDCIFAFFAVEMVIKMMALGIFGSKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMTDDVKALYNLSYMDPYYMHEDGED
NPFICSTNKENGMLPCSEVPPFKKGDIECTLKPPLPGHTYFGLDGPSRNTCVNWNQYYNF
CRAGEFNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISH
LYRKVKRRASRIYNSWQSKRRKKVNPNSGLPGGGGAGGGANGHSRHRSGSHWVRSVHNLV
QQHQRQHCHLSNGSPSPLASSGPGEAVEMRSITTGPQLTVSSQPTAVQNLSSRTQSVQSI
YQGDFHEVPQVPAGTDGGVSALGRLNGGMNYPTILPSFMCSYAGRNPAGKGRGDSNTSSE
SDAVDPFEKLQQLMGERGHSHLLLQMAGVVPGPLLFELLSCPYCARALENMDMELGDSDC
SRSDGDVVYEFSHGVEFKPGRLSHNKVVEESNRLALFWENFRDRLIRIVESKYFNRGIMI
AILINTLSMGIEYHEQPKELTDILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIFD
GIIVVISVWEILGQTDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCML
LMLFIFTFSILGMHLFGCKFSMKMENNDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLY
NGMASTTPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDVDEEKRSVNFEEE
EKMGELRATELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKGSLGPESVFGLDE
SRRGSGVSIDPNAFDQKSLSSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRRDTSGE
RESLLSGEGKGSFEDEDSEGDKMGFIGGGSMQHPSSLDIPELPHAPSFSTLGDYHDCNGR
TLQLPADLPTNLSKEDSITEEDMDDSFCFRLKRTLQAFKPQWCKDHEEWSLYLFSPQNKF
RMMCQRLISHRMFDHVVLVFIFLNCITIALERPNIQLSERWFLSISNYVFTVIFVAEMTV
KVVALGFCCGKHSYLQSTWNVLDGVLVFVSLIDILVSLASSGGNRIFGILRVLRLLRTLR
PLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTK
NIQNKSDCLQAKYKWVRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDATGVDQQPKR
NHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLLEKKR
RKAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIIGINVVTMSIEHYNQPIYLEEALKY
CNYVFTIVFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINP
TIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELF
GKLECNEKNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTTDDKHCLSY
LPLVSPIYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEIEMARRLS
NVSAGSSLGPEGKATYVGPRADSPGQDEEVQRTQDNLLSPRKMSVSRMHSLPNDSYMFRP
VRPASAPYPLEEVEPSQGYLELGSITSVHSQPCEGYSLLQVPGVPPHSQLYCLPKIPPPK
PSPTHSIDRTLRRQEAIKNDSIDAQGSDSKDNLHRQAGKTTGSFKLHVPRISCANSSQGS
PLLAPSVHTFQHPQSQHNIPSRPPSQASSSRTTSPSGSMFDSADLADDEVCNINSTAGLW
TGVQAEARSHSLSPYTTSGMLLPVPVKNCSSAANLAELSIKDPKKCFSVDTEGFLEKPYC
TDDHRRHSIEICPSVDNGVFGQDLGEKRHAPVRGQSLHIPRKKKMSPPCISIEPPFETEA
PASLTSMKKLTVSSMLLRRRTPSYDLALQRDSLDLPENQLSTQPLIKVERHPSHCAEYLS
LPHPTTKSGLAGILCESTQPPPFDSRFEESTDFSSVNIK
NT seq
6600 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgttgaactgtgtgactctgggtatgttccagccatgtgaggacctc
aagtgccagtctgagtggtgtgtcatcctacaggcatttgatgactgcatcttcgctttc
tttgctgtggagatggtcattaaaatgatggccctggggatttttggatcaaagtgttac
cttggcgacacgtggaaccgcctggacttcttcatagtcatggcagggatgatggagtac
tcactggacggtcacaatgccagcctgtcagccattcggactgtgcgagtgctcaggccc
ctgcgagccatcaacagagtgcctagtatgaggatactggttactctgcttctagatact
ctgcctatgttaggcaacgtccttctgctgtgcttttttgtcttctttatattcgggatc
gtcggggtgcagctctgggccggacttctaaggaatcgctgtttcatgacagatgatgtg
aaagccctctacaatctgtcctacatggatccatactacatgcacgaggacggtgaggac
aaccccttcatctgctccaccaataaggagaacggcatgctgccctgcagtgaggtgccc
cccttcaaaaagggtgacattgagtgcacccttaaaccacctctaccaggacacacctac
tttggcctggatggacccagtagaaacacctgcgttaactggaaccagtattacaatttt
tgtcgggctggggagttcaaccctcacaaaggggcagtgaactttgataatattggatac
gcctggattgcgatattccaggttattactttggaaggatgggtggatatcatgtattac
gttatggatgcccactccttttacaattttatatattttatattgcttataatagtgggc
tccttcttcatgatcaacctgtgcctggttgtaatagcaacccagttctccgaaacaaag
cagcgtgaaaaccagctgatgcaggagcagagggcacgctacctctccaacgacagcacg
ctcgccagctactccgagccgggaagctgctacgaggagatgctcaggtacatcagccac
ttgtaccgcaaggtaaagcggcgtgcttcccgcatctacaacagctggcagagcaagcgc
aggaagaaagtgaaccccaacagcgggctgcctgggggaggaggggctggaggcggggcc
aacggccacagcaggcacaggagcggcagtcattgggtccgttccgtccacaaccttgta
cagcagcaccaacgtcaacactgtcacctcagcaatgggagccccagccctttggcctcc
tcagggcccggcgaggcagtggagatgaggtccattacaacggggccacagcttacagtg
tcttctcagccaaccgcggtgcagaatctttcttccaggactcaatcagtgcaaagtatt
tatcaaggtgactttcacgaggtcccgcaggtgccagcgggcaccgatgggggcgtatca
gcgctcgggcgactaaacggggggatgaactatccaaccatcttgccctccttcatgtgc
agctacgcaggcagaaaccctgcgggtaaaggcaggggtgactcgaacaccagctcagaa
agtgatgctgtagatccctttgagaagctgcaacagctcatgggagagcgtggtcacagt
catttactgctacagatggctggtgttgttcccggcccactgctctttgagctcctgagc
tgcccatattgtgcaagggctctggagaatatggatatggagcttggtgattcagattgc
tccagatcagatggggatgtggtgtacgagttttcccatggagtggaatttaaacctggc
cgcttatcccacaataaagtagtggaggaaagcaaccgcctggcgctgttctgggaaaac
ttcagggatagattgatacgcatagtggagagcaaatatttcaatcgaggaattatgatc
gccatcctcatcaacaccttaagcatggggattgaataccatgagcagcctaaggagctg
acagacatcctggagatcagcaatattgtcttcactagcatgtttgtcctcgaaatgctc
ttcaaactgcttgcctttggcatcttcggctacatcaagaatccctacaacatatttgat
gggattattgtggtcataagtgtgtgggagatcctaggtcagacggatggaggtctttcg
gttctgaggacgtttcgccttctgcgtgtgctcaaactggtgcgcttccttcctgcactg
cgcagacagctggtggtcctcatgaagactatggacaatgtggccacattctgcatgctg
cttatgctattcatctttacattcagcattcttgggatgcatctgtttgggtgcaagttc
agcatgaagatggagaataatgacacaattccagacaggaaaaactttgattctcttctg
tgggcgatcgtcactgtgtttcagattctgactcaagaggactggaacgtggtcctttat
aacggaatggcttccaccactccatgggcggctctttacttcgtggctctgatgacgttc
gggaattacgttcttttcaacctgctggtagccatcttagtggagggctttcaggcggag
ggggacgctaacagatcggacgtggacgaggaaaagaggtcggtgaactttgaagaggag
gagaagatgggggaattacgagccacagaattgaagatgtactcactgatgatgtcagca
aatgggcacgttgatcctcggggcaccttgcctccaccaatcatcatgcgtactgctgcc
acacccatgcccacaccgaaaggctctcttggcccagagtcggtgtttgggttggacgag
tcgaggcggggtagtggggtctctatagatccaaatgcctttgatcagaaatccctgtcc
agcccaagaagatctccatgccacccccgtggctcaggtagtaactggggcagccgcagg
tccagctggaacagcttagggcgagcgccgagcttaaaaagaagggacacatctggagaa
agagagtctttgctgtctggggagggcaagggcagttttgaagatgaagactcggagggg
gataaaatgggctttattggtggaggctcaatgcagcatcccagctctctggatatccct
gagctgccccatgcccccagctttagcacattgggagattaccatgattgcaatggaaga
accttgcagctgcccgctgacctacccaccaacttgagtaaagaagactccatcacagag
gaggatatggatgatagcttctgtttccgtctgaagaggacgttgcaggcatttaaacct
cagtggtgtaaagatcacgaggaatggtcgctttatctgttctcccctcagaacaagttt
cggatgatgtgtcagaggttaatttctcacaggatgtttgatcatgtggtcctggtattc
atcttcctaaattgtatcaccattgctctggaaagacccaatatccagctatctgagcga
tggtttctcagtatttccaattacgttttcactgtgatatttgttgctgaaatgactgtg
aaggtggtggcccttggcttctgctgtgggaagcacagttatctgcagagtacctggaat
gttctggatggggtgctggtctttgtctccctcattgacattctggtctctctggcttcc
agtggtggaaaccgaatctttggcatcctgagggttcttcgcctgctgaggaccctgcgg
ccgctgagagtgattagccgtgctcctggcctaaagcttgtggtggaaacactcataaca
tcccttaggcccatcgggaacattgtgctgatctgctgtgccttctttattgtctttggc
attctgggtgtccagctcttcaaaggaaagttttaccattgtgaaggtctggacaccaaa
aacatccaaaataaatctgattgtcttcaagcaaaatacaaatgggttcgaagaaagtac
aactttgacaatttgggacaggcccttatgtcattgttcgtactctcctgtaaggacggg
tgggtgaacattatgtacgacgggctggatgctacgggggtggaccagcagcctaagcgc
aatcacaacccctggatgctcctctacttcatctccttcctgctgatcgtcagcttcttt
gtgctaaacatgttcgtcggggtggtggtggaaaacttccacaagtgcagacaggatcag
gaggaagaggaggcacggctgcgcgaggagaagaggcagaggctgctggagaaaaagcgc
aggaaggcccaacagaggccgtactatgcagactactctccagcccggctttacatccac
acactgtgtaccaaccactatctggacctcttcatcacgtgtatcatcggcattaatgtg
gtcactatgtctatcgaacactataatcagcctatatacctggaagaggcattgaaatac
tgtaactatgtcttcaccattgtcttcattattgaggctttactcaaactggtggctttt
ggctttcggagatttttcaaagacagatggaaccagctggatctagccatagtcctgctc
tctatcatgggcatcacgctggaagagatcaagatgaatgcagcactgcccatcaacccc
accattatccgcattatgagggtgctgaggatagccagagtactgaagcttctgaagatg
gccacaggcatgagagcactgttagatacagtaatgcaggctttaccacaggtgggaaat
ctgggtttgctgttcatgctcctcttcttcatttatgcagcgcttggcgtggagcttttt
gggaaactagaatgcaatgaaaaaaacccttgtgaaggactaagtcgacacgcaacgttt
gagaactttggaatggcttttttaacattattcagagtgtcaactggggacaactggaat
ggcataatgaaggacactctgcgggagtgcactacagatgacaagcactgcctcagctac
ctgcccctggtctcccccatctactttgttacttttgtgctaatcgctcagtttgtgctg
gttaatgttgtggtggccgttttgatgaaacacctggaggagagcaacaaggaagctaaa
gaagatgcagaaatggacgccgagatcgagatggagattgaaatggctcgccgtctcagc
aacgtctctgcagggagctctttagggcctgagggcaaagcaacttatgtaggcccacgt
gccgattcacctgggcaggatgaggaggtgcagagaactcaggacaatttgctctctccg
cggaaaatgtcggtgtcaaggatgcattctctgcccaatgacagctacatgtttcgccct
gtgagaccggccagtgctccgtatccactggaagaggtggaaccaagtcaggggtacctt
gaattaggctccatcacctcggttcactcccaaccatgcgaaggctattccctgctccag
gtccctggtgttcctcctcattcccaattatactgcctccccaaaatcccccctcccaag
ccctctccaacccatagcatagacaggactctacgaagacaggaggcgataaaaaatgac
tcaatcgatgcgcaaggttcagactccaaagacaatcttcacagacaagcagggaagact
acaggaagcttcaagctgcacgttccacggatttcttgcgccaacagttcccagggatcg
cctttgctagcacccagcgtccacaccttccagcatccccagagccagcacaacatccca
tctcgacctccaagtcaggccagcagcagcagaaccaccagccccagtggctccatgttt
gactcagctgatctggcggacgatgaggtctgcaacatcaacagtacagcaggactgtgg
acaggggtccaggcagaagcacgcagtcactcgctgtctccctacaccacctcagggatg
ctgcttccagtcccggtgaagaattgcagcagtgctgccaacttagccgagttgagcatt
aaagacccaaagaagtgtttcagcgtggacacggagggttttctggaaaaaccctactgt
acggacgaccatcgcaggcactcaattgagatttgcccttcggtagacaatggggtattc
ggtcaagacctcggtgagaagaggcacgctccagtccgtggacagtcattgcacattccc
aggaagaaaaagatgagtcctccttgtatctccatagagccgccatttgaaacggaggcc
cctgcctctctcacgtccatgaaaaagctgacggtgagcagcatgttactgcggaggagg
acgccgtcgtatgacctggccctgcagcgggactctctggatttgccggagaaccagctg
tctacccagccgctcatcaaagtagagcggcacccctctcactgtgccgagtatctgtcc
ctaccgcaccccaccacaaagagcggtctggcgggcattttgtgtgaaagcacacagcca
cctcccttcgacagtagatttgaagaatccacagacttcagctctgtaaacattaagtaa
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