Paramisgurnus dabryanus (large-scale loach): 135748028
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Entry
135748028 CDS
T10799
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04144
Endocytosis
pdab04517
IgSF CAM signaling
pdab04520
Adherens junction
pdab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135748028
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135748028
09144 Cellular community - eukaryotes
04520 Adherens junction
135748028
04530 Tight junction
135748028
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135748028
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135748028
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135748028
NCBI-ProteinID:
XP_065122173
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All DBs
Position
6:1760151..1907209
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AA seq
1352 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNLKVHALIQQAAMRYRRAIAKGEEYWVQVYRLEHGDGGILD
LDDVLSDVADDKDRLVAVYDEQEPHVGGDGTSASSTGTQSPEIFSGEPSTSTPLSAFQPY
LPQSEIEVTTSTLRTNMPLHVRRSSDPALLNLTSVSFSEANSQPEEPFKKNPTRWSTTAG
FMKPRFTTGTNSLERKGKSVDTYRSLPRDAGQWNSQREFQRETARSSLSANHPMVDRWLE
RQEQEEEENGRIEPVGRADTCLDHIGVRSLDDIVKLVEVSNDGGPLGIHVVPFSGRDRRT
LGLLVKRLERGGKADAQALFQENDCIVRINNGDLRNVRFEQAQNMFRQAMRSPVILFHVV
PSAMRSQYEQISYNEHNPRANFDLSGRLSPDSFTNEPVDNAGMDLAAHRLAQHRPHPSDN
LTDTSSPMHHHIGSAGKPPSGLTPSPQRGLSPTPASGFTKKVGRKLGIQLRKGPEGLGFS
ITSRDVPLGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRGQEEVVSLLRAT
PMGGTVSLLVHRQEETFLPREMNTEPAMQNTREWKVEEEELVLTPDGTREFLTLEVPLSD
SGSAGLGVSVKGNRSKESHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTN
QDAMETLRKSMSTEGNKRGMIQLIVARRINKHLEGESRSSPRRLDRTLSPSPNDHERRIS
HSLYGIEGLDDNLRPQPNTPNHKMNHYQLSPTVNMPQDDMVIIEDDTPHVLPARLSDQSS
SSSHDDMGFAVETPPPPLWVQGLPDSSASANDEGAFQREGFGRQSMSEKRTKQFGDPSQL
DIIKTRKSKSMDLVADEINLTRFTDKQTGSSTYDVGPSLGLKKSSSLESLQTAVAEVTLN
GDLPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAANEDEEEGMDTLEEDNEGSSRSGRDS
ASTVADLTPLAVTEQQLINGNQPQNDKKKEKGGKDKKKPEKEKSKTKKGMLKGLGEMFRF
GKYRKDGVDGGKWKAEETHASEEETRQMRQEQERIQAKTREIRQRQARERDYAEIQDFSS
STMTSLPTEDPPYAGIGSLEHGGYYRIHTPPDSPFALKQSTQNGHSSAADRLTPSNHDRI
QRLRQEFQHVRQEETEPDDRHHSYNLEQPWSNCSPHSTSGRHSVSVEVQLRRQEARDAFT
HAQRQYSSLPRQPRKMPTPATQSDCERPCPPVDGFQAAKDSGRYSSYQGPRSFPRTFPRP
SYRNGVSAPPAPTGTSVGGGYNARVLLEAQELLRQEQRRREQEIKGRVASMRIDYESQDS
KGPLRQDVPPSPSQVVRLGRIHTPEKARPFLS
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgtttcggcagaactcgggtcgtggttccgtgcggagacggcaac
cttaaagtgcacgcgctcatccagcaggccgcgatgcggtacaggagagcgatcgctaag
ggtgaagagtactgggtgcaggtctacagacttgaacacggtgatggaggaattctggat
ttggatgatgttttgtccgacgttgcggacgacaaagacagattggtggcggtgtatgac
gaacaggagccgcacgttggaggtgacggcaccagcgcgagttcgacaggcacacagtca
ccggagattttctctggagagccatccacctccaccccactgtctgcctttcagccgtac
ctgccccagagcgagatagaggtcaccacctccacgcttcgaaccaacatgcctttgcat
gtacggcgcagcagtgatccagcattgttaaacctgacatcagtgtcgttctccgaagcg
aactcacaacctgaggaacctttcaagaagaaccccacacgctggtccacaaccgccggc
ttcatgaaaccccgctttaccactggcaccaacagcctggagagaaaggggaaaagtgtg
gacacgtaccgtagtcttcctcgtgatgcagggcaatggaacagtcagagggagtttcaa
cgtgaaacggcccgttcttcgctcagcgccaatcatccaatggtggaccgctggctggaa
cgacaagagcaggaagaggaagagaatgggaggatagagccggtgggacgagcggatacg
tgtttagatcacataggagtgagatcactagatgatatcgtgaaactggtagaagtgtcc
aatgatggaggtccactcggcatccacgttgtgcccttcagcgggcgtgaccgcaggacg
ttaggtctattggtgaagcgtttggagcgtgggggaaaagcagacgctcaggctttgttc
caggaaaacgactgcatcgttcggatcaacaacggagacctgcggaatgtccgctttgag
caagctcagaacatgtttcgtcaggccatgcgttctcctgtcatcctctttcacgtggtg
ccgtccgccatgagatcccagtacgaacagatatcctataatgaacataacccaagggcg
aactttgatctttctggtcgcctcagcccggattccttcaccaacgaaccagtcgacaat
gctggaatggacctcgccgctcaccgattggcacaacacaggccacacccatcagataac
ctgacagataccagctctcccatgcatcatcatattggctcagcagggaaaccaccatca
ggtctcactccctctcctcagagaggcttaagccccacccctgcatcaggctttactaaa
aaagttgggaggaaacttgggatccaacttagaaaaggacctgaaggtcttgggttcagc
atcacatcaagagacgtcccactgggaggctccgcccctatttatgtgaagaacatccta
ccgagaggagcggccatacaggacggacgacttaaagctggggacagactgctagaggtc
aatggagtggatctcaatgggcgtggtcaggaggaggtggtttcactgttgagggccaca
cccatgggcggtactgtgagtctcctggtgcatagacaagaagaaacctttctacccaga
gagatgaacacagaaccagcaatgcagaacacaagagaatggaaggtagaagaagaggaa
ttggtcttaactccagacggtacgcgtgagttcctgacgttggaagtgcctctgagtgat
tctggctctgcggggttaggcgtcagtgttaagggtaacaggtcaaaggagtcccatgct
gacttgggcatctttgtcaagtctattatcaatggaggagcagcatgcaaggacggtcga
ctgcgtgtcaacgatcagctcattgcagttaatggtgagtctttattaggcaagaccaac
caagatgccatggaaacgctgcgcaagtccatgtcaacggagggcaacaagcgagggatg
attcagctgatcgtggccagaagaatcaacaaacacctcgagggtgagagcagatccagt
cccagacggttagatcggaccttgagcccgtctcctaatgaccacgagcgaaggatctca
cactccctgtatgggattgaggggcttgatgacaacctgagaccacaaccaaacacaccc
aaccacaaaatgaatcattatcagctctcccccaccgtcaacatgcctcaggatgacatg
gtcataatagaagatgacacgccgcatgttctccctgcacggctgtctgaccaatcatct
tccagttctcatgatgacatgggtttcgcagtggaaacgcctccgccgccactctgggtc
caaggacttccggacagctctgccagtgctaatgatgagggggcgtttcagagggaaggc
tttggcaggcaaagcatgtctgagaaacgcaccaagcagtttggagacccaagccaactc
gacatcatcaagacccgcaagtctaagagcatggacttagtggctgatgagattaacctc
acacgcttcacagacaagcagacagggtcatccacatatgatgttggcccatctcttggc
ctgaagaagtccagctctctggaaagtttacagaccgctgtcgctgaggtgacgctcaac
ggtgacctcccctttcatcggccacgcccgcgtatcataagagggcggggctgcaacgag
agcttccgtgctgctattgacaaatcgtacgacaggccagcagccaatgaggatgaagag
gagggcatggacacactggaggaggacaatgaaggaagctctcggtcaggacgggattca
gcttccacggtagctgacctcactccactcgcagtcaccgagcaacagctgatcaatggc
aatcagcctcaaaacgacaagaagaaagagaaaggggggaaggacaaaaagaagccagag
aaagaaaagagtaaaacaaagaaaggaatgctcaaggggctcggagagatgttcaggttc
ggaaagtaccgcaaagatggtgtggatggtggaaagtggaaggctgaggaaactcatgca
tccgaggaggagacacgccagatgagacaagaacaagagaggattcaggcgaaaacgcga
gagatccgtcagcgtcaggccagagagcgggactatgctgagatccaggatttcagcagc
tccacgatgacatcactccccaccgaggatcccccgtacgccggcatcggctcgctagaa
catggcgggtactaccggattcacacgcccccagactcaccctttgcactcaaacagagc
acccaaaatgggcactcctcggcggcagacaggctaacaccaagcaaccatgaccgaatc
cagcgcttacggcaggagtttcaacacgtcagacaggaagagacggagccagatgaccgc
catcattcctacaacctagagcagccctggtccaactgcagtccgcactccacatctggc
cgtcattcggtgtctgtggaggtacagttacggagacaggaagctcgagatgcctttact
catgctcagaggcagtacagctctctaccacgtcaaccccgtaagatgcccaccccggct
acacagagtgattgtgagaggccgtgtccacctgtagatggtttccaggcagctaaagac
agtggacgttactccagctaccagggccctcgatctttcccacgcactttccctcgtccc
agctacaggaatggtgtctctgctccccctgcacccaccgggacctcagtgggtggcggc
tacaatgcccgtgtcttactggaggcccaggagctcctccgacaggaacaaagacgcagg
gaacaggaaattaaaggaagagttgcgtcaatgaggatcgactacgaatcccaggattcc
aaaggacccctccgacaagatgtcccaccctccccttcacaggttgttagactcggccgc
atccacactcctgagaaagcacggccatttttgtcatga
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