Paramisgurnus dabryanus (large-scale loach): 135748327
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Entry
135748327 CDS
T10799
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135748327 (rnf20)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135748327 (rnf20)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
135748327 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
135748327
NCBI-ProteinID:
XP_065122592
LinkDB
All DBs
Position
16:complement(12842752..12857216)
Genome browser
AA seq
1004 aa
AA seq
DB search
MSGQKRSCDPSGSVALGAPPEKKKGGEDGEGMSTGSGGSTAVETVIKLGGSLNLEEQDIK
ALQIKNRKLGEALDQRGVIEDELRERVERLETRQATDDASLLILNRYWNQFDENVRLIAR
RYDQSGSEPVESQPPEGRSLKPGTPEPDGDSNPDRAKGQGEGPSSFLATLASSSSEEMEA
ELQERAESSCKQASRVIEIYENLKNTVDQLKKDMESGADGCLWDVAVRLNTLLTNENERL
RQLTDDLQQKHGHMTSESGSLGRAANRADNRISELQVLIEELQWDMEKFRRRENRLNTHL
TEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSELQKLQQDL
QTVYQENNNMKVELLSRAEEVARESAEYRCLQSQFSVLYNESLVLKSQLDETKARLNTTR
TARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPIN
REMRHLISTLQTHNQQMKGEVVKYKLRLREAQQELNQLRAAKGNAAVQSQSSTELEVKEE
ITSPVTPAQSSDVTIKTEPDSGSATPSTTGVTVKTEPGTETETVVKEEEKEKDKDKEKEK
EHRERERMNRGSTGGGAVKEERDKASTSSSQSEDLAPERCAVIGVPKRKEVEQLKIVRVE
LKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEELRQRVRELEEKERREG
KKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLMQQ
LREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKERLL
QGTISAAERELALRTQALEMNKRKAQDSVLLSEDVRSQLEGVQQRLGAVREEVVENSISR
EKESFNARRAQEDISKLRRKIENVKKPAENIRNGDEILNEEINDYKARLTCPCCNSRVKD
AVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcagaaacgttcctgtgaccccagtggctctgttgccctcggtgctcctcca
gagaagaagaagggaggtgaggatggagagggaatgagcactggatccggtggaagcact
gctgtagaaaccgtcattaaactgggaggaagtttaaacttggaggaacaggatatcaaa
gctctgcagattaaaaacagaaagttgggagaggcgctagaccaaagaggggtgattgag
gatgaattgagagagagagtggagaggttggagacccgtcaggcgacagatgatgcgagt
ttgctgattcttaacagatactggaaccagtttgacgagaatgtgcggttaatagcccgc
cgctatgaccaatcaggaagtgagcctgtagaaagccaaccacctgaagggcggagtttg
aaaccaggaacaccagaaccagatggagactcgaatccagatagagcaaaaggtcagggt
gaggggccgagctcatttttggccacactggccagcagcagcagtgaggagatggaggcg
gagctacaggagcgggccgagtccagctgtaagcaggccagccgtgtgattgaaatctac
gagaacctgaagaacacagtagatcagctaaagaaggacatggagtctggtgcagacggc
tgtctctgggatgtcgctgtccggcttaacacccttctgaccaatgagaatgaacgtctc
cgtcagctgacagatgatctccagcaaaagcacggtcacatgaccagcgagtctggttca
ttgggccgtgcggcaaaccgtgctgataacagaatcagtgagctgcaggttctgatagag
gagctgcagtgggatatggagaagttcagacgaagggaaaatcgccttaacacacacctt
acagaggtgctggagagggtaaacagtaaaggttataaggtgtgtggtgaagcaagcagt
gtttgtgggaccatcactatcaacaaaaggaagtttgaggagatgaacagtgagttggag
gagaacagggagctggcggagaatcggctgagtgaacttcagaaacttcagcaggatctg
cagacggtttatcaggagaacaacaacatgaaggtggagttgttgtccagggctgaggag
gttgccagagagagcgcagagtatcgctgtctgcagtctcagttctcagtgctctacaat
gagtctctggtgttgaaatctcagctagacgagaccaaagcacgactcaatacgaccagg
accgcccgtctgcgccagctggaccacatggagaatgatgaggtgtcactgcagcgtaaa
gtccgtactgaagtgattcagctggaggacaccttagctcaggtgcgcaaggagtacgag
atgctgaggatcgagtttgagcaaacactagctgctaatgaacaagcaggccctataaac
cgtgaaatgcgacatctgatcagtacgctgcagacccataaccagcagatgaaaggagaa
gtggttaaatataagcttagactgagagaggctcagcaagagctcaaccagctccgtgcc
gccaaaggcaatgctgctgtccaatcgcagtcaagtacggagctggaagtaaaggaagag
atcacctccccagttacaccagcccagtcaagtgatgttactatcaagacagagccggat
agcggctcggctacacccagcaccactggtgtaacagttaagacagaaccgggtacagaa
accgagactgtggtaaaagaggaggaaaaggagaaagataaggataaggaaaaagaaaag
gaacaccgagaaagagagaggatgaaccgtggtagtactggaggcggagctgtgaaagaa
gagagagataaagccagcaccagcagcagccaatcagaagacttagcgcctgaacgctgc
gctgtgattggagtccctaaacgaaaggaggtggagcagttgaaaatagtcagggtggag
cttaagaaagcccaagagtctcagagggagatgaagcttttgttggacatgtaccgctct
gctccaaaagaacagcgagacaaagtacaactgatggcagcggagaagaagaccaagtca
gaggctgaggagctccggcagagggttcgagagctggaggagaaggagaggagagaagga
aagaagatggcagatgaagaggctctgagaaagattcgttcagtagaagagcagatcgat
attcttaataagaaattgtccctcgctaagcaggaggaggatgcgctgctgagcgagatg
gatgttaccggtcaggcgtttgaggacatgcaagagcaaaacattcgtctgatgcaacag
ctcagagagaaagatgatgccaacttcaaactcatgagtgagcgaatcaaatccaaccaa
atccacaaacttctcaaggaggagaaagaggagctagctgaccagttgcttacactaaaa
acacaggttgatgctcagttgcaagttgtaagaaagctagaggagaaagagcgcctgctg
cagggcaccatcagcgctgcagaaagagagctggcccttcgcacacaagcattagagatg
aacaaacgcaaggcacaggattcagtgttgctatccgaggacgtgcgatctcagttggaa
ggagtgcagcagaggttgggtgctgtcagagaggaggtggtcgagaacagtatctcccgt
gagaaagagtccttcaatgctcgacgggcacaggaggatatatccaagctacgcaggaaa
atagagaatgtgaagaaacctgctgagaatattcgcaatggagatgagatccttaatgag
gaaatcaacgattacaaggcccgcttgacgtgtccatgctgcaattcacgcgtgaaagac
gccgttttgacgaagtgctttcacgttttttgcttcgagtgtgtcaagacgcgatatgac
acccgccaaaggaaatgtccgaagtgcaatgccgctttcggtgccaatgatttccatcgc
atctacatcggataa
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