Paramisgurnus dabryanus (large-scale loach): 135748498
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Entry
135748498 CDS
T10799
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135748498
04121 Ubiquitin system [BR:
pdab04121
]
135748498
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
135748498
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
135748498
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Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like
ZBED1_RNase-like_helical
zf-BED
FAM200-ZBED5_RNase-like
DBD_Tnp_Hermes
DUF8247
hAT-like_RNase-H
FAM200-GTF2IRD2-like
DUF7892
Motif
Other DBs
NCBI-GeneID:
135748498
NCBI-ProteinID:
XP_073671376
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All DBs
Position
7:16594097..16595617
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AA seq
414 aa
AA seq
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MTMCIICILKVKCLLCHKELTYSNNTSSMLRHYRAMHEDAQPAANRPDTSQNYRKKMVDE
ALVNMVIKDSQPFSVVDDVGFRELVHVLDPSYVLPTRKALKSMVDSRYEEAKEKAKEKLD
NVVAVSLTSDMWTSINMEAYLAVTCHFIDANDQLGTILLGVQHFPNTHTAENLAISHTMV
MEEWGIKDKVRCLVTDAAANMIACVRALNIRHAICIAHALNLIVRKSFDDVPDLNQLRTK
CRKLVTYFRTSTTGKERLAQVQVQMGRPTLKMIIEVDTRWNSTYSMLERMYDLREPVGAA
LASLRTDVSPPSSLEYDTIKDALEILAPFHQATVELSAEKIVSASKVIPLLKMLNHTILT
KSEGLTSNMARQLADNLVRRVREHALQMESISVMTMPTLLDPRFKKLGFLKGDL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtgtattatctgcatattgaaggtgaaatgtttgctgtgccacaaagagctg
acttacagcaacaacacctcctccatgcttaggcattatcgtgcaatgcatgaggatgcg
caacctgctgcaaacagaccagacactagtcaaaattacagaaagaaaatggtggatgag
gctttggtcaacatggtcatcaaagactcccaacccttttctgttgtggatgacgtgggg
tttagagagcttgtgcatgtgctggatccatcctatgttcttccaacaagaaaggctttg
aagtccatggttgatagcaggtatgaggaggctaaggagaaggccaaagagaagttggac
aatgttgttgctgttagccttacgtccgacatgtggacatcgataaacatggaggcttac
ctggctgtgacatgtcatttcatagatgccaatgaccagcttgggacaatcttgcttggg
gtgcaacatttcccaaacacccatacagcagagaacttggctatttctcatactatggtc
atggaggagtggggcataaaggacaaggtgaggtgccttgtcacggatgctgctgccaat
atgattgcctgtgtcagggcattaaatattaggcatgccatatgcattgcacatgcatta
aatttaattgtcagaaagtctttcgacgatgtaccagacttaaatcagcttcgcaccaaa
tgtaggaagcttgttacctacttcaggaccagcacaacaggcaaagaaagactggcccaa
gtgcaggtgcagatggggagaccaactctaaaaatgattattgaggtggacacccgttgg
aacagcacatacagcatgctggaaaggatgtacgacctgagagagccagtgggggcagct
ttggcctctttaaggacagatgtaagccctccttcttcattagaatatgacaccataaaa
gatgctcttgaaatactggccccattccaccaagccacagtagagctttctgcagagaaa
atagtgtcagcatcaaaggttattcccctactgaagatgctaaaccacaccattttaaca
aaatcagagggcttaacatcaaatatggcgaggcagctggctgacaaccttgtccgtcgc
gtcagagagcatgcattgcaaatggaatcaataagtgtgatgacaatgcctacattgctg
gaccctaggttcaaaaaactaggcttcctaaagggcgatttatag
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