Paramisgurnus dabryanus (large-scale loach): 135748628
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Entry
135748628 CDS
T10799
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04137
Mitophagy - animal
pdab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135748628 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135748628 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdab03019
]
135748628 (vcp)
03009 Ribosome biogenesis [BR:
pdab03009
]
135748628 (vcp)
04131 Membrane trafficking [BR:
pdab04131
]
135748628 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdab04147
]
135748628 (vcp)
Messenger RNA biogenesis [BR:
pdab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135748628 (vcp)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135748628 (vcp)
Membrane trafficking [BR:
pdab04131
]
SNARE
SNARE associated proteins
Others
135748628 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135748628 (vcp)
Exosome [BR:
pdab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135748628 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
135748628
NCBI-ProteinID:
XP_065122941
LinkDB
All DBs
Position
5:complement(11367875..11382080)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSSGAGGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaatgatgatctttccactgccatcctgaagcagaag
aacaggccaaataggctgattgttgatgagtccatcaatgaagacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctctttaggggggacacagttttgttgaag
ggcaaaaagaggagggagactgtttgcatcgtcctgtctgatgacacctgctctgatgag
aaggttcgcatgaacagggtggtccgtaacaacctaagggtgcgccttggtgatgtcatc
agtattcagccatgtccagatgtgaagtatggaaaacgcattcatgttctgcccatcgat
gacacagttgaaggtatcactgggaacctgtttgaagtctatctcaagccctacttcctg
gaggcttaccgaccaatccgtaaaggtgatatatttctggtgagaggaggcatgcgagct
gtggagttcaaagtggttgagactgaccccagcccatactgtattgtggccccagacaca
gtaatccactgtgagggagaacccattaagagagaggatgaggaagagtccctgaatgag
gttgggtatgatgacattggtggggtaaggaaacagctcgcccagattaaagaaatggtg
gaactccctctgagacacccagctctcttcaaggctataggagtcaagcctccccgtggc
atcctgctgtatggacccccaggaactggaaagactcttattgctcgtgctgtggcaaat
gaaactggagcattcttcttcctcatcaatggccctgaaattatgagcaaactggcagga
gagtctgagagtaatctgcgcaaagctttcgaggaagcagagaagaacgctccagctatc
attttcattgatgaactcgatgccattgcacccaaaagagaaaagactcatggcgaggtg
gagaggcgcattgtctctcagctgctcactttgatggatggactgaagcagagagctcat
gtcattgttatggcagctactaacagaccaaacagcatcgacccagctcttagacgattc
ggccgctttgacagagaggtggacattggcattccagatgctactggtagacttgagata
cttcagatccacaccaagaacatgaaacttgctgatgacgttgatctggagcaggtggca
aatgagacccatggccatgttggtgccgatcttgctgccctctgctcagaagctgcactc
caagccatccgtaagaaaatggaccttattgatctggaagacgagaccattgatgctgaa
gttatgaactctttggctgttaccatggatgacttcaggtgggcccttagccagagcaac
ccctcagccctgcgtgagacagttgtggaggtgcccaacatctcttgggaggatattggt
ggtcttgatgatgtcaagagagagctgcaggagcttgtgcagtacccagtggaacaccca
gacaaattccttaagtttggcatgacaccatccaaaggtgtgctcttctacggaccacca
ggttgtggtaaaaccctgctggcaaaggccatcgccaatgagtgccaggccaactttatc
tcaatcaagggaccagaacttctcaccatgtggtttggagagtcagaggctaacgtccga
gagatctttgacaaggcccgtcaagctgccccatgtgtgctcttctttgatgaattggac
tccattgctaaggctcgtggtggaaatgttggtgatggcggcggtgctgccgacagagtc
attaaccagatcctcacagaaatggacggcatgtccagcaagaagaacgtcttcatcatc
ggcgcaaccaacagaccagacatcattgaccctgccatcctcaggcctggccgattggac
cagctcatctacatcccactgccagatgagaagtcccgcatgtccattcttaaagctaac
ctcaggaagtctccaatctcaaaggatgtggacctggactacttggccaagatgaccaat
ggcttttcaggtgctgatttgactgagatctgtcagagagcttgtaaactggccatccgt
gagtctattgagaatgagatcagacgggagcgtgagaggcagaccaacccttctgcaatg
gaggtggaggaggatgaccctgtgcctgagattaggaaggaccatttcgaggaggctatg
cgctttgctcgccgctctgtcagtgacaacgacatccgtaaatacgagatgttcgcacag
accctgcaacaaagcagaggctttggcagtttcagattcccatccagtaaccaaggagga
agtggaccaagtcagggttcttctggtgctggaggaggaaacgtcttcaatgaggacaac
gatgatgatctttatggataa
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integrated database retrieval system
